RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 CDKN2AP42771 156 aaKnown RBP9.36□□□□□ -0.91
NDEL1-208ENST00000580237 RASSF2P50749 326 aa9.36□□□□□ -0.91
NDEL1-208ENST00000580237 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.36□□□□□ -0.91
NDEL1-208ENST00000580237 MSMPQ1L6U9 139 aa9.36□□□□□ -0.91
NDEL1-208ENST00000580237 ZNF718Q3SXZ3 478 aa9.36□□□□□ -0.91
NDEL1-208ENST00000580237 SLC35F1Q5T1Q4 408 aa9.36□□□□□ -0.91
NDEL1-208ENST00000580237 OTPQ5XKR4 325 aa9.36□□□□□ -0.91
NDEL1-208ENST00000580237 TMEM154Q6P9G4 183 aa9.36□□□□□ -0.91
NDEL1-208ENST00000580237 RFPL4BQ6ZWI9 263 aa9.36□□□□□ -0.91
NDEL1-208ENST00000580237 SYT9Q86SS6 491 aa9.36□□□□□ -0.91
NDEL1-208ENST00000580237 LRP11Q86VZ4 500 aa9.36□□□□□ -0.91
NDEL1-208ENST00000580237 AQP12AQ8IXF9 295 aa9.36□□□□□ -0.91
NDEL1-208ENST00000580237 ZNF101Q8IZC7 436 aa9.36□□□□□ -0.91
NDEL1-208ENST00000580237 ADGRG5Q8IZF4 528 aa9.36□□□□□ -0.91
NDEL1-208ENST00000580237 ZNF540Q8NDQ6 660 aa9.36□□□□□ -0.91
NDEL1-208ENST00000580237 OR52E2Q8NGJ4 325 aa9.36□□□□□ -0.91
NDEL1-208ENST00000580237 OR4C15Q8NGM1 316 aa9.36□□□□□ -0.91
NDEL1-208ENST00000580237 TEX47Q8TBZ9 253 aa9.36□□□□□ -0.91
NDEL1-208ENST00000580237 POM121L2Q96KW2 1035 aa9.36□□□□□ -0.91
NDEL1-208ENST00000580237 TSSK2Q96PF2 358 aa9.36□□□□□ -0.91
NDEL1-208ENST00000580237 SNX18Q96RF0 628 aa9.36□□□□□ -0.91
NDEL1-208ENST00000580237 CHID1Q9BWS9 393 aa9.36□□□□□ -0.91
NDEL1-208ENST00000580237 FN3KQ9H479 309 aa9.36□□□□□ -0.91
NDEL1-208ENST00000580237 YY1AP1Q9H869 796 aa9.36□□□□□ -0.91
NDEL1-208ENST00000580237 ELOVL3Q9HB03 270 aa9.36□□□□□ -0.91
NDEL1-208ENST00000580237 SLCO1C1Q9NYB5 712 aa9.36□□□□□ -0.91
NDEL1-208ENST00000580237 TAAR3PQ9P1P4 343 aa9.36□□□□□ -0.91
NDEL1-208ENST00000580237 MYEF2Q9P2K5 600 aaKnown RBP9.36□□□□□ -0.91
NDEL1-208ENST00000580237 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.36□□□□□ -0.911e-8■■■□□ 15.8
NDEL1-208ENST00000580237 FN1P02751 2386 aaKnown RBP9.35□□□□□ -0.91
NDEL1-208ENST00000580237 LOC100509620A0A075B734 347 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 INAFM1C9JVW0 142 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 ACOT8O14734 319 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 MPZL1O95297 269 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 CLPTM1O96005 669 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 WNT5AP41221 380 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 NR4A2P43354 598 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 ERFP50548 548 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 HMGA2P52926 109 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 PPP1CBP62140 327 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 LSM6P62312 80 aaKnown RBP9.35□□□□□ -0.91
NDEL1-208ENST00000580237 LOXL1Q08397 574 aaPredicted RBP9.35□□□□□ -0.91
NDEL1-208ENST00000580237 GK3PQ14409 553 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 MOGQ16653 247 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 MEP1BQ16820 701 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 MICAQ29983 383 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 TMEM249Q2WGJ8 235 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 SLC36A3Q495N2 470 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 MALRD1Q5VYJ5 2156 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 RASSF6Q6ZTQ3 369 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 VASH1Q7L8A9 365 aaPredicted RBP9.35□□□□□ -0.91
NDEL1-208ENST00000580237 NPEPL1Q8NDH3 523 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 PROKR2Q8NFJ6 384 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 OR2AJ1Q8NGZ0 328 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 SLC25A40Q8TBP6 338 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 UBASH3BQ8TF42 649 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 GIPC3Q8TF64 312 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 IPCEF1Q8WWN9 437 aaPredicted RBP9.35□□□□□ -0.91
NDEL1-208ENST00000580237 C4orf45Q96LM5 186 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 PLA2G12AQ9BZM1 189 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 BPESC1Q9GZL8 116 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 RACGAP1Q9H0H5 632 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 SRA1Q9HD15 236 aaKnown RBP9.35□□□□□ -0.91
NDEL1-208ENST00000580237 YAE1D1Q9NRH1 226 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 VNN3Q9NY84 501 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 TANC2Q9HCD6 1990 aa9.35□□□□□ -0.91
NDEL1-208ENST00000580237 ZNF469Q96JG9 3925 aaPredicted RBP9.34□□□□□ -0.91
NDEL1-208ENST00000580237 IGLV1-36A0A0B4J1U3 117 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 RIIAD1A6NNX1 92 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 H3BN98 237 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 DCTN6O00399 190 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 CD5LO43866 347 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 TIMM8AO60220 97 aaPredicted RBP9.34□□□□□ -0.91
NDEL1-208ENST00000580237 GPANK1O95872 356 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 GASTP01350 101 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 IFNGP01579 166 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 SCG5P05408 212 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 GAAP10253 952 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 COX5BP10606 129 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 ZNF250P15622 560 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 CBX1P83916 185 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 ZMAT1Q5H9K5 638 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 ZNF770Q6IQ21 691 aaPredicted RBP9.34□□□□□ -0.91
NDEL1-208ENST00000580237 C1orf174Q8IYL3 243 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 OR6V1Q8N148 313 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 CYB561A3Q8NBI2 242 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 OR2T33Q8NG76 320 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 OR2T4Q8NH00 348 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 CANT1Q8WVQ1 401 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 SLC7A6OSQ96CW6 309 aaPredicted RBP9.34□□□□□ -0.91
NDEL1-208ENST00000580237 CDADC1Q9BWV3 514 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 TSSK6Q9BXA6 273 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 OR2J1Q9GZK6 312 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 HDHD2Q9H0R4 259 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 ZNF556Q9HAH1 456 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 HINT3Q9NQE9 182 aaKnown RBP9.34□□□□□ -0.91
NDEL1-208ENST00000580237 ARMC1Q9NVT9 282 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 KIF17Q9P2E2 1029 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 B9D1Q9UPM9 204 aa9.34□□□□□ -0.91
NDEL1-208ENST00000580237 BAIAP2Q9UQB8 552 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms