RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 LCN6P62502 163 aa16.67■□□□□ 0.26
LIMD2-209ENST00000580222 RIPK1Q13546 671 aa16.67■□□□□ 0.26
LIMD2-209ENST00000580222 SLC35F1Q5T1Q4 408 aa16.67■□□□□ 0.26
LIMD2-209ENST00000580222 SLC27A4Q6P1M0 643 aa16.67■□□□□ 0.26
LIMD2-209ENST00000580222 C20orf196Q8IYI0 205 aa16.67■□□□□ 0.26
LIMD2-209ENST00000580222 SYT14Q8NB59 555 aa16.67■□□□□ 0.26
LIMD2-209ENST00000580222 LRR1Q96L50 414 aa16.67■□□□□ 0.26
LIMD2-209ENST00000580222 SLC29A1Q99808 456 aa16.67■□□□□ 0.26
LIMD2-209ENST00000580222 ZNF696Q9H7X3 374 aa16.67■□□□□ 0.26
LIMD2-209ENST00000580222 CENPBD1B2RD01 187 aa16.66■□□□□ 0.26
LIMD2-209ENST00000580222 IDH3BO43837 385 aa16.66■□□□□ 0.26
LIMD2-209ENST00000580222 TXNDC12O95881 172 aa16.66■□□□□ 0.26
LIMD2-209ENST00000580222 DAOP14920 347 aa16.66■□□□□ 0.26
LIMD2-209ENST00000580222 GRK5P34947 590 aa16.66■□□□□ 0.26
LIMD2-209ENST00000580222 HILS1P60008 231 aa16.66■□□□□ 0.26
LIMD2-209ENST00000580222 MYBPC1Q00872 1141 aa16.66■□□□□ 0.26
LIMD2-209ENST00000580222 ROR2Q01974 943 aaKnown RBP16.66■□□□□ 0.26
LIMD2-209ENST00000580222 GINS1Q14691 196 aa16.66■□□□□ 0.26
LIMD2-209ENST00000580222 ADIPOQQ15848 244 aa16.66■□□□□ 0.26
LIMD2-209ENST00000580222 OR7E24Q6IFN5 339 aa16.66■□□□□ 0.26
LIMD2-209ENST00000580222 ADCK1Q86TW2 530 aa16.66■□□□□ 0.26
LIMD2-209ENST00000580222 LNX2Q8N448 690 aa16.66■□□□□ 0.26
LIMD2-209ENST00000580222 TMEM54Q969K7 222 aa16.66■□□□□ 0.26
LIMD2-209ENST00000580222 ALG12Q9BV10 488 aa16.66■□□□□ 0.26
LIMD2-209ENST00000580222 SLC25A19Q9HC21 320 aa16.66■□□□□ 0.26
LIMD2-209ENST00000580222 C8orf4Q9NR00 106 aa16.66■□□□□ 0.26
LIMD2-209ENST00000580222 GLTPQ9NZD2 209 aa16.66■□□□□ 0.26
LIMD2-209ENST00000580222 NBEAL2Q6ZNJ1 2754 aa16.65■□□□□ 0.26
LIMD2-209ENST00000580222 OR4A8P0C604 315 aa16.65■□□□□ 0.26
LIMD2-209ENST00000580222 HIST1H1CP16403 213 aaKnown RBP16.65■□□□□ 0.26
LIMD2-209ENST00000580222 RIN1Q13671 783 aa16.65■□□□□ 0.26
LIMD2-209ENST00000580222 PHYHD1Q5SRE7 291 aa16.65■□□□□ 0.26
LIMD2-209ENST00000580222 OGFRL1Q5TC84 451 aaPredicted RBP16.65■□□□□ 0.26
LIMD2-209ENST00000580222 LEG1Q6P5S2 330 aa16.65■□□□□ 0.26
LIMD2-209ENST00000580222 C1orf229Q6ZS94 237 aaPredicted RBP16.65■□□□□ 0.26
LIMD2-209ENST00000580222 GALNT4Q8N4A0 578 aa16.65■□□□□ 0.26
LIMD2-209ENST00000580222 SDR9C7Q8NEX9 313 aa16.65■□□□□ 0.26
LIMD2-209ENST00000580222 OR4K13Q8NH42 304 aa16.65■□□□□ 0.26
LIMD2-209ENST00000580222 TEX12Q9BXU0 123 aa16.65■□□□□ 0.26
LIMD2-209ENST00000580222 GABARAPL3Q9BY60 117 aa16.65■□□□□ 0.26
LIMD2-209ENST00000580222 VCXQ9H320 206 aa16.65■□□□□ 0.26
LIMD2-209ENST00000580222 PLK3Q9H4B4 646 aa16.65■□□□□ 0.26
LIMD2-209ENST00000580222 CA10Q9NS85 328 aa16.65■□□□□ 0.26
LIMD2-209ENST00000580222 PCDHB10Q9UN67 800 aa16.65■□□□□ 0.26
LIMD2-209ENST00000580222 NOTCH1P46531 2555 aa16.64■□□□□ 0.25
LIMD2-209ENST00000580222 IGHV1-18A0A0C4DH31 117 aa16.64■□□□□ 0.25
LIMD2-209ENST00000580222 RENP00797 406 aa16.64■□□□□ 0.25
LIMD2-209ENST00000580222 IFNGP01579 166 aa16.64■□□□□ 0.25
LIMD2-209ENST00000580222 IDH3GP51553 393 aaPredicted RBP16.64■□□□□ 0.25
LIMD2-209ENST00000580222 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.64■□□□□ 0.25
LIMD2-209ENST00000580222 NPRL3Q12980 569 aa16.64■□□□□ 0.25
LIMD2-209ENST00000580222 PTGES3Q15185 160 aaKnown RBP16.64■□□□□ 0.25
LIMD2-209ENST00000580222 CEACAM16Q2WEN9 425 aa16.64■□□□□ 0.25
LIMD2-209ENST00000580222 ZIK1Q3SY52 487 aaPredicted RBP16.64■□□□□ 0.25
LIMD2-209ENST00000580222 TMEM236Q5W0B7 351 aa16.64■□□□□ 0.25
LIMD2-209ENST00000580222 PTCHD4Q6ZW05 846 aa16.64■□□□□ 0.25
LIMD2-209ENST00000580222 LINGO2Q7L985 606 aa16.64■□□□□ 0.25
LIMD2-209ENST00000580222 PACRGLQ8N7B6 248 aa16.64■□□□□ 0.25
LIMD2-209ENST00000580222 OR52E2Q8NGJ4 325 aa16.64■□□□□ 0.25
LIMD2-209ENST00000580222 FNDC8Q8TC99 324 aa16.64■□□□□ 0.25
LIMD2-209ENST00000580222 ZNF418Q8TF45 676 aaPredicted RBP16.64■□□□□ 0.25
LIMD2-209ENST00000580222 RBP7Q96R05 134 aa16.64■□□□□ 0.25
LIMD2-209ENST00000580222 MRPL13Q9BYD1 178 aaKnown RBP16.64■□□□□ 0.25
LIMD2-209ENST00000580222 PRRG3Q9BZD7 231 aa16.64■□□□□ 0.25
LIMD2-209ENST00000580222 CRLF2Q9HC73 371 aa16.64■□□□□ 0.25
LIMD2-209ENST00000580222 GPR35Q9HC97 309 aa16.64■□□□□ 0.25
LIMD2-209ENST00000580222 KLHL21Q9UJP4 597 aa16.64■□□□□ 0.25
LIMD2-209ENST00000580222 SPEF1Q9Y4P9 236 aa16.64■□□□□ 0.25
LIMD2-209ENST00000580222 PRSS37A4D1T9 235 aa16.63■□□□□ 0.25
LIMD2-209ENST00000580222 RIIAD1A6NNX1 92 aa16.63■□□□□ 0.25
LIMD2-209ENST00000580222 B9A039 149 aa16.63■□□□□ 0.25
LIMD2-209ENST00000580222 SLC2A10O95528 541 aa16.63■□□□□ 0.25
LIMD2-209ENST00000580222 QDPRP09417 244 aa16.63■□□□□ 0.25
LIMD2-209ENST00000580222 MPGP29372 298 aa16.63■□□□□ 0.25
LIMD2-209ENST00000580222 GIPRP48546 466 aa16.63■□□□□ 0.25
LIMD2-209ENST00000580222 CDK5Q00535 292 aa16.63■□□□□ 0.25
LIMD2-209ENST00000580222 FMODQ06828 376 aa16.63■□□□□ 0.25
LIMD2-209ENST00000580222 MIDNQ504T8 468 aa16.63■□□□□ 0.25
LIMD2-209ENST00000580222 ACSM5Q6NUN0 579 aa16.63■□□□□ 0.25
LIMD2-209ENST00000580222 VHLLQ6RSH7 139 aa16.63■□□□□ 0.25
LIMD2-209ENST00000580222 MCHR2Q969V1 340 aa16.63■□□□□ 0.25
LIMD2-209ENST00000580222 PLEKHA8Q96JA3 519 aa16.63■□□□□ 0.25
LIMD2-209ENST00000580222 NMNAT3Q96T66 252 aa16.63■□□□□ 0.25
LIMD2-209ENST00000580222 ZNF747Q9BV97 191 aa16.63■□□□□ 0.25
LIMD2-209ENST00000580222 SYT4Q9H2B2 425 aa16.63■□□□□ 0.25
LIMD2-209ENST00000580222 LPAR2Q9HBW0 351 aa16.63■□□□□ 0.25
LIMD2-209ENST00000580222 ESM1Q9NQ30 184 aa16.63■□□□□ 0.25
LIMD2-209ENST00000580222 HIF1ANQ9NWT6 349 aa16.63■□□□□ 0.25
LIMD2-209ENST00000580222 AMDHD2Q9Y303 409 aa16.63■□□□□ 0.25
LIMD2-209ENST00000580222 SLC22A23A1A5C7 686 aa16.62■□□□□ 0.25
LIMD2-209ENST00000580222 ZAR1LA6NP61 321 aa16.62■□□□□ 0.25
LIMD2-209ENST00000580222 RPL36A-HNRNPH2H7BZ11 118 aa16.62■□□□□ 0.25
LIMD2-209ENST00000580222 TRIM77I1YAP6 450 aa16.62■□□□□ 0.25
LIMD2-209ENST00000580222 DHHO43323 396 aa16.62■□□□□ 0.25
LIMD2-209ENST00000580222 AHCYL1O43865 530 aa16.62■□□□□ 0.25
LIMD2-209ENST00000580222 AVPP01185 164 aa16.62■□□□□ 0.25
LIMD2-209ENST00000580222 HMGN1P05114 100 aa16.62■□□□□ 0.25
LIMD2-209ENST00000580222 ZNF3P17036 446 aa16.62■□□□□ 0.25
LIMD2-209ENST00000580222 CDKN2AP42771 156 aaKnown RBP16.62■□□□□ 0.25
LIMD2-209ENST00000580222 PPOXP50336 477 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms