RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 ARR3P36575 388 aa10.58□□□□□ -0.72
IFT20-207ENST00000578547 IDH3GP51553 393 aaPredicted RBP10.58□□□□□ -0.72
IFT20-207ENST00000578547 TMED1Q13445 227 aa10.58□□□□□ -0.72
IFT20-207ENST00000578547 RAB39AQ14964 217 aa10.58□□□□□ -0.72
IFT20-207ENST00000578547 PABPC1L2AQ5JQF8 200 aa10.58□□□□□ -0.72
IFT20-207ENST00000578547 C6orf141Q5SZD1 244 aa10.58□□□□□ -0.72
IFT20-207ENST00000578547 SP5Q6BEB4 398 aaPredicted RBP10.58□□□□□ -0.72
IFT20-207ENST00000578547 SLC18B1Q6NT16 456 aa10.58□□□□□ -0.72
IFT20-207ENST00000578547 ZNF774Q6NX45 483 aa10.58□□□□□ -0.72
IFT20-207ENST00000578547 CFAP77Q6ZQR2 320 aa10.58□□□□□ -0.72
IFT20-207ENST00000578547 DPPA2Q7Z7J5 298 aa10.58□□□□□ -0.72
IFT20-207ENST00000578547 CCDC36Q8IYA8 594 aa10.58□□□□□ -0.72
IFT20-207ENST00000578547 RFLNBQ8N5W9 214 aa10.58□□□□□ -0.72
IFT20-207ENST00000578547 LGALS12Q96DT0 336 aa10.58□□□□□ -0.72
IFT20-207ENST00000578547 BOD1Q96IK1 185 aa10.58□□□□□ -0.72
IFT20-207ENST00000578547 USB1Q9BQ65 265 aaKnown RBP10.58□□□□□ -0.72
IFT20-207ENST00000578547 OR2H1Q9GZK4 316 aa10.58□□□□□ -0.72
IFT20-207ENST00000578547 YIPF3Q9GZM5 350 aa10.58□□□□□ -0.72
IFT20-207ENST00000578547 WNT5BQ9H1J7 359 aa10.58□□□□□ -0.72
IFT20-207ENST00000578547 OBP2BQ9NPH6 170 aa10.58□□□□□ -0.72
IFT20-207ENST00000578547 B3GNT2Q9NY97 397 aa10.58□□□□□ -0.72
IFT20-207ENST00000578547 HAO2Q9NYQ3 351 aa10.58□□□□□ -0.72
IFT20-207ENST00000578547 PLEK2Q9NYT0 353 aa10.58□□□□□ -0.72
IFT20-207ENST00000578547 UBAP1Q9NZ09 502 aa10.58□□□□□ -0.72
IFT20-207ENST00000578547 CYB5R1Q9UHQ9 305 aa10.58□□□□□ -0.72
IFT20-207ENST00000578547 LAMP5Q9UJQ1 280 aa10.58□□□□□ -0.72
IFT20-207ENST00000578547 KLHDC2Q9Y2U9 406 aa10.58□□□□□ -0.72
IFT20-207ENST00000578547 TIMM10BQ9Y5J6 103 aa10.58□□□□□ -0.72
IFT20-207ENST00000578547 ZNF670-ZNF695F2Z2N8 137 aa10.57□□□□□ -0.72
IFT20-207ENST00000578547 M0R1B8 84 aa10.57□□□□□ -0.72
IFT20-207ENST00000578547 LYNP07948 512 aa10.57□□□□□ -0.72
IFT20-207ENST00000578547 CELA3BP08861 270 aa10.57□□□□□ -0.72
IFT20-207ENST00000578547 IGFBP2P18065 325 aa10.57□□□□□ -0.72
IFT20-207ENST00000578547 KIR2DL3P43628 341 aa10.57□□□□□ -0.72
IFT20-207ENST00000578547 HTR5AP47898 357 aa10.57□□□□□ -0.72
IFT20-207ENST00000578547 PSG4Q00888 419 aa10.57□□□□□ -0.72
IFT20-207ENST00000578547 PLP2Q04941 152 aa10.57□□□□□ -0.72
IFT20-207ENST00000578547 TEX30Q5JUR7 227 aa10.57□□□□□ -0.72
IFT20-207ENST00000578547 MEX3BQ6ZN04 569 aaKnown RBP10.57□□□□□ -0.72
IFT20-207ENST00000578547 AHSA2Q719I0 299 aa10.57□□□□□ -0.72
IFT20-207ENST00000578547 SYT9Q86SS6 491 aa10.57□□□□□ -0.72
IFT20-207ENST00000578547 CDC20BQ86Y33 519 aa10.57□□□□□ -0.72
IFT20-207ENST00000578547 ACBD4Q8NC06 268 aa10.57□□□□□ -0.72
IFT20-207ENST00000578547 GJC3Q8NFK1 279 aa10.57□□□□□ -0.72
IFT20-207ENST00000578547 OR52I1Q8NGK6 324 aa10.57□□□□□ -0.72
IFT20-207ENST00000578547 OTOSQ8NHW6 89 aa10.57□□□□□ -0.72
IFT20-207ENST00000578547 THEM6Q8WUY1 208 aa10.57□□□□□ -0.72
IFT20-207ENST00000578547 MS4A3Q96HJ5 214 aa10.57□□□□□ -0.72
IFT20-207ENST00000578547 MAP6Q96JE9 813 aa10.57□□□□□ -0.72
IFT20-207ENST00000578547 AMELYQ99218 206 aa10.57□□□□□ -0.72
IFT20-207ENST00000578547 C1orf198Q9H425 327 aa10.57□□□□□ -0.72
IFT20-207ENST00000578547 CENPMQ9NSP4 180 aa10.57□□□□□ -0.72
IFT20-207ENST00000578547 NPAP1Q9NZP6 1156 aa10.57□□□□□ -0.72
IFT20-207ENST00000578547 COPS3Q9UNS2 423 aa10.57□□□□□ -0.72
IFT20-207ENST00000578547 COL12A1Q99715 3063 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 IGHV1-18A0A0C4DH31 117 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 IQCMA0A1B0GVH7 501 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 A0A1W2PQL4 384 aaPredicted RBP10.56□□□□□ -0.72
IFT20-207ENST00000578547 EFCAB10A6NFE3 127 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 PTGES3LE9PB15 166 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 HAX1O00165 279 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 PSMD9O00233 223 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 CASKO14936 926 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 FADS2O95864 444 aaKnown RBP10.56□□□□□ -0.72
IFT20-207ENST00000578547 CBR1P16152 277 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 COL8A1P27658 744 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 APEX1P27695 318 aaKnown RBP10.56□□□□□ -0.72
IFT20-207ENST00000578547 CXCR4P61073 352 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 RAB40BQ12829 278 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 RAB35Q15286 201 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 PCK2Q16822 640 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 KLHL22Q53GT1 634 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 CCDC92Q53HC0 331 aaPredicted RBP10.56□□□□□ -0.72
IFT20-207ENST00000578547 ELFN2Q5R3F8 820 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 SEZ6L2Q6UXD5 910 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 VASH1Q7L8A9 365 aaPredicted RBP10.56□□□□□ -0.72
IFT20-207ENST00000578547 MYPOPQ86VE0 399 aaPredicted RBP10.56□□□□□ -0.72
IFT20-207ENST00000578547 DMRTC2Q8IXT2 367 aaPredicted RBP10.56□□□□□ -0.72
IFT20-207ENST00000578547 ZNF454Q8N9F8 522 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 ZNF540Q8NDQ6 660 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 ST7LQ8TDW4 575 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 SLAMF6Q96DU3 332 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 DACH2Q96NX9 599 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 COPS4Q9BT78 406 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 WACQ9BTA9 647 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 ABHD6Q9BV23 337 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 SCN3BQ9NY72 215 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 CRIM1Q9NZV1 1036 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 PLEKHB1Q9UF11 243 aaPredicted RBP10.56□□□□□ -0.72
IFT20-207ENST00000578547 PSORS1C1Q9UIG5 152 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 EXOGQ9Y2C4 368 aaKnown RBP10.56□□□□□ -0.72
IFT20-207ENST00000578547 MYRFQ9Y2G1 1151 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 LRRC42Q9Y546 428 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 TMEM14AQ9Y6G1 99 aa10.56□□□□□ -0.72
IFT20-207ENST00000578547 DAPL1A0PJW8 107 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 IRGMA1A4Y4 181 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 OR2T7P0C7T2 308 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 CECR9P0C854 216 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 CCL2P13500 99 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 ZNF14P17017 642 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms