RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	NDRG4	Q9ULP0	352 aa	Known RBP	11.71	□□□□□ -0.53
CSNK1D-208	ENST00000578501	B9D1	Q9UPM9	204 aa		11.71	□□□□□ -0.53
CSNK1D-208	ENST00000578501	POMP	Q9Y244	141 aa		11.71	□□□□□ -0.53
CSNK1D-208	ENST00000578501		U3KQV3	271 aa		11.71	□□□□□ -0.53
CSNK1D-208	ENST00000578501	IGLV1-36	A0A0B4J1U3	117 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	LOC390937	A0A1W2PQ73	354 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	TCRBV3S1	A0A5B6	114 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501		H3BSA7	217 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	DCTN6	O00399	190 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	BHLHE40	O14503	412 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	LY6H	O94772	140 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	CST1	P01037	141 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	LCK	P06239	509 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	GAA	P10253	952 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	CCNO	P22674	350 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	WNT5A	P41221	380 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	KLF3	P57682	345 aa	Predicted RBP	11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	GLO1	Q04760	184 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	LOXL1	Q08397	574 aa	Predicted RBP	11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	COX10	Q12887	443 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	PPP1R8	Q12972	351 aa	Known RBP	11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	MOG	Q16653	247 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	ZNF774	Q6NX45	483 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	ARL9	Q6T311	187 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	LRP11	Q86VZ4	500 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	OR6V1	Q8N148	313 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	ZCCHC24	Q8N2G6	241 aa	Known RBP	11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	PAPD5	Q8NDF8	572 aa	Known RBP	11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	NPEPL1	Q8NDH3	523 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	OR4K13	Q8NH42	304 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	SYNPR	Q8TBG9	265 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	DDO	Q99489	341 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	CADM1	Q9BY67	442 aa	Known RBP	11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	MMADHC	Q9H3L0	296 aa	Predicted RBP	11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	RERGL	Q9H628	205 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	YY1AP1	Q9H869	796 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	ELOVL3	Q9HB03	270 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	SLCO1C1	Q9NYB5	712 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	DUSP13	Q9UII6	198 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	FZR1	Q9UM11	496 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	BAIAP2	Q9UQB8	552 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	NBEAL1	Q6ZS30	2694 aa		11.7	□□□□□ -0.54
CSNK1D-208	ENST00000578501	OR6C68	A6NDL8	312 aa		11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	VWC2L	B2RUY7	222 aa		11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	SGCE	O43556	437 aa		11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	MPZL1	O95297	269 aa		11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	IGHV3-13	P01766	116 aa		11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	TUBG1	P23258	451 aa		11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	KRTAP1-1	Q07627	177 aa		11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	CLEC12A	Q5QGZ9	265 aa		11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	ZNF362	Q5T0B9	420 aa	Predicted RBP	11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	MBNL2	Q5VZF2	373 aa	Known RBP	11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	VASH1	Q7L8A9	365 aa	Predicted RBP	11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	SPATA24	Q86W54	205 aa		11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	ZNF101	Q8IZC7	436 aa		11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	LNX2	Q8N448	690 aa		11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	MAPK1IP1L	Q8NDC0	245 aa		11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	ZNF540	Q8NDQ6	660 aa		11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	OR10G2	Q8NGC3	310 aa		11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	OR52E2	Q8NGJ4	325 aa		11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	OR1J1	Q8NGS3	322 aa		11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	GIPC3	Q8TF64	312 aa		11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	C4orf45	Q96LM5	186 aa		11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	FOXN4	Q96NZ1	517 aa		11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	TSSK2	Q96PF2	358 aa		11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	PLA2G12A	Q9BZM1	189 aa		11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	SRA1	Q9HD15	236 aa	Known RBP	11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	TUBG2	Q9NRH3	451 aa		11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	TBCCD1	Q9NVR7	557 aa		11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	MYEF2	Q9P2K5	600 aa	Known RBP	11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	ASH2L	Q9UBL3	628 aa		11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	ATPIF1	Q9UII2	106 aa		11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501	CHD3	Q12873	2000 aa	Known RBP	11.69	□□□□□ -0.54
CSNK1D-208	ENST00000578501		A0A1W2PPW3	197 aa		11.68	□□□□□ -0.54
CSNK1D-208	ENST00000578501	OR6C6	A6NF89	314 aa		11.68	□□□□□ -0.54
CSNK1D-208	ENST00000578501	DOK2	O60496	412 aa		11.68	□□□□□ -0.54
CSNK1D-208	ENST00000578501	DAO	P14920	347 aa		11.68	□□□□□ -0.54
CSNK1D-208	ENST00000578501	GIF	P27352	417 aa		11.68	□□□□□ -0.54
CSNK1D-208	ENST00000578501	ALDH3B1	P43353	468 aa		11.68	□□□□□ -0.54
CSNK1D-208	ENST00000578501	NR4A2	P43354	598 aa		11.68	□□□□□ -0.54
CSNK1D-208	ENST00000578501	ARHGDIA	P52565	204 aa		11.68	□□□□□ -0.54
CSNK1D-208	ENST00000578501	ERVS71-1	P61550	626 aa		11.68	□□□□□ -0.54
CSNK1D-208	ENST00000578501	HIST1H3A	P68431	136 aa		11.68	□□□□□ -0.54
CSNK1D-208	ENST00000578501	MRPS11	P82912	194 aa	Known RBP	11.68	□□□□□ -0.54
CSNK1D-208	ENST00000578501	ZNF718	Q3SXZ3	478 aa		11.68	□□□□□ -0.54
CSNK1D-208	ENST00000578501	SLC35F1	Q5T1Q4	408 aa		11.68	□□□□□ -0.54
CSNK1D-208	ENST00000578501	HIST2H3PS2	Q5TEC6	136 aa		11.68	□□□□□ -0.54
CSNK1D-208	ENST00000578501	HIST2H3A	Q71DI3	136 aa		11.68	□□□□□ -0.54
CSNK1D-208	ENST00000578501	ZNF786	Q8N393	782 aa		11.68	□□□□□ -0.54
CSNK1D-208	ENST00000578501	SDR9C7	Q8NEX9	313 aa		11.68	□□□□□ -0.54
CSNK1D-208	ENST00000578501	GJC3	Q8NFK1	279 aa		11.68	□□□□□ -0.54
CSNK1D-208	ENST00000578501	SLC26A10	Q8NG04	563 aa		11.68	□□□□□ -0.54
CSNK1D-208	ENST00000578501	OR8D4	Q8NGM9	314 aa		11.68	□□□□□ -0.54
CSNK1D-208	ENST00000578501	UBASH3B	Q8TF42	649 aa		11.68	□□□□□ -0.54
CSNK1D-208	ENST00000578501	IPCEF1	Q8WWN9	437 aa	Predicted RBP	11.68	□□□□□ -0.54
CSNK1D-208	ENST00000578501	MARS2	Q96GW9	593 aa	Known RBP	11.68	□□□□□ -0.54
CSNK1D-208	ENST00000578501	DCLRE1C	Q96SD1	692 aa	Known RBP	11.68	□□□□□ -0.54
CSNK1D-208	ENST00000578501	FEV	Q99581	238 aa		11.68	□□□□□ -0.54
CSNK1D-208	ENST00000578501	PIMREG	Q9BSJ6	248 aa		11.68	□□□□□ -0.54

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