RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 ZNF32P17041 273 aa9.5□□□□□ -0.89
SMARCE1-214ENST00000578112 FUT1P19526 365 aa9.5□□□□□ -0.89
SMARCE1-214ENST00000578112 VAMP1P23763 118 aa9.5□□□□□ -0.89
SMARCE1-214ENST00000578112 DUSP7Q16829 419 aa9.5□□□□□ -0.89
SMARCE1-214ENST00000578112 ZNF181Q2M3W8 571 aa9.5□□□□□ -0.89
SMARCE1-214ENST00000578112 PDLIM3Q53GG5 364 aaPredicted RBP9.5□□□□□ -0.89
SMARCE1-214ENST00000578112 TMEM86BQ8N661 226 aa9.5□□□□□ -0.89
SMARCE1-214ENST00000578112 SLC26A7Q8TE54 656 aa9.5□□□□□ -0.89
SMARCE1-214ENST00000578112 SLC25A28Q96A46 364 aa9.5□□□□□ -0.89
SMARCE1-214ENST00000578112 CGREF1Q99674 301 aa9.5□□□□□ -0.89
SMARCE1-214ENST00000578112 OR2H1Q9GZK4 316 aa9.5□□□□□ -0.89
SMARCE1-214ENST00000578112 TMEM106BQ9NUM4 274 aa9.5□□□□□ -0.89
SMARCE1-214ENST00000578112 OR5V1Q9UGF6 321 aa9.5□□□□□ -0.89
SMARCE1-214ENST00000578112 NDUFAF1Q9Y375 327 aa9.5□□□□□ -0.89
SMARCE1-214ENST00000578112 IFNA8P32881 189 aa9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 MDH2P40926 338 aaKnown RBP9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 WNT5AP41221 380 aa9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 ERVS71-1P61550 626 aa9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 TNFAIP6P98066 277 aaPredicted RBP9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 PAX8Q06710 450 aa9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 SCRN3Q0VDG4 424 aa9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 ALKBH6Q3KRA9 238 aa9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 AGKQ53H12 422 aa9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 COQ5Q5HYK3 327 aa9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 C10orf111Q8N326 155 aa9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 SIGLECL1Q8N7X8 197 aa9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 TSPAN32Q96QS1 320 aa9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 ZNF347Q96SE7 839 aa9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 IKZF5Q9H5V7 419 aa9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 KAT8Q9H7Z6 458 aaKnown RBP9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 MED31Q9Y3C7 131 aa9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 ATP8B1O43520 1251 aa9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 MAKP20794 623 aa9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 SLC6A9P48067 706 aa9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 RGS6P49758 472 aa9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 MAGOHP61326 146 aaKnown RBP9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 PSG4Q00888 419 aa9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 LRRC8CQ8TDW0 803 aa9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 CCL17Q92583 94 aa9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 SGCDQ92629 289 aa9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 C4orf45Q96LM5 186 aa9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 FAM107BQ9H098 131 aa9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 MEPEQ9NQ76 525 aaPredicted RBP9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 SLAMF8Q9P0V8 285 aa9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 AP3M1Q9Y2T2 418 aa9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 PCDHGB1Q9Y5G3 927 aa9.49□□□□□ -0.89
SMARCE1-214ENST00000578112 DNAJC9-AS1A6NH13 148 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 ZSCAN5BA6NJL1 495 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 ANGPT2O15123 496 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 SPRY3O43610 288 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 SLC9A3P48764 834 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 RPL27P61353 136 aaKnown RBP9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 BTG1P62324 171 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 BAMBIQ13145 260 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 VMACQ2NL98 169 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 PCYOX1LQ8NBM8 494 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 TMEM239Q8WW34 195 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 HDAC2Q92769 488 aaKnown RBP9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 WFDC6Q9BQY6 131 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 WNT5BQ9H1J7 359 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 NANOGQ9H9S0 305 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 IL20Q9NYY1 176 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 C5orf49A4QMS7 147 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 BLOC1S5-TXNDC5H3BN57 136 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 MSR1P21757 451 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 AQP1P29972 269 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 MPV17P39210 176 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 CYLC2Q14093 348 aaPredicted RBP9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 ESCO2Q56NI9 601 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 METTL21CQ5VZV1 264 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 PGM2L1Q6PCE3 622 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 BTNL3Q6UXE8 466 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 TREML4Q6UXN2 200 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 OR8J3Q8NGG0 315 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 UPRTQ96BW1 309 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 TAMM41Q96BW9 452 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 UNKLQ9H9P5 680 aaKnown RBP9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 MIOXQ9UGB7 285 aa9.48□□□□□ -0.89
SMARCE1-214ENST00000578112 LOC100509620A0A075B734 347 aa9.47□□□□□ -0.89
SMARCE1-214ENST00000578112 ISPDA4D126 451 aa9.47□□□□□ -0.89
SMARCE1-214ENST00000578112 TIMM8AO60220 97 aaPredicted RBP9.47□□□□□ -0.89
SMARCE1-214ENST00000578112 PAHP00439 452 aa9.47□□□□□ -0.89
SMARCE1-214ENST00000578112 CCL2P13500 99 aa9.47□□□□□ -0.89
SMARCE1-214ENST00000578112 GZMMP51124 257 aa9.47□□□□□ -0.89
SMARCE1-214ENST00000578112 TAS2R41P59536 307 aa9.47□□□□□ -0.89
SMARCE1-214ENST00000578112 LCN2P80188 198 aa9.47□□□□□ -0.89
SMARCE1-214ENST00000578112 GLO1Q04760 184 aa9.47□□□□□ -0.89
SMARCE1-214ENST00000578112 LRRC18Q8N456 261 aa9.47□□□□□ -0.89
SMARCE1-214ENST00000578112 OR4D11Q8NGI4 311 aa9.47□□□□□ -0.89
SMARCE1-214ENST00000578112 ABHD4Q8TB40 342 aa9.47□□□□□ -0.89
SMARCE1-214ENST00000578112 PLEKHA8Q96JA3 519 aa9.47□□□□□ -0.89
SMARCE1-214ENST00000578112 OR2J1Q9GZK6 312 aa9.47□□□□□ -0.89
SMARCE1-214ENST00000578112 NOX4Q9NPH5 578 aa9.47□□□□□ -0.89
SMARCE1-214ENST00000578112 A0A0G2JK05 382 aa9.46□□□□□ -0.89
SMARCE1-214ENST00000578112 NDUFA7O95182 113 aa9.46□□□□□ -0.89
SMARCE1-214ENST00000578112 PLATP00750 562 aa9.46□□□□□ -0.89
SMARCE1-214ENST00000578112 RAC2P15153 192 aa9.46□□□□□ -0.89
SMARCE1-214ENST00000578112 ST3GAL3Q11203 375 aa9.46□□□□□ -0.89
SMARCE1-214ENST00000578112 ALG10Q5BKT4 473 aa9.46□□□□□ -0.89
SMARCE1-214ENST00000578112 C16orf54Q6UWD8 224 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms