RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 A0A0G2JMP0 313 aa12.31□□□□□ -0.44
SMARCE1-213ENST00000578044 A0A0X1KG70 313 aa12.31□□□□□ -0.44
SMARCE1-213ENST00000578044 ZNF682O95780 498 aa12.31□□□□□ -0.44
SMARCE1-213ENST00000578044 SERPINA1P01009 418 aa12.31□□□□□ -0.44
SMARCE1-213ENST00000578044 IGHV1-46P01743 117 aa12.31□□□□□ -0.44
SMARCE1-213ENST00000578044 IGHV2-5P01817 119 aa12.31□□□□□ -0.44
SMARCE1-213ENST00000578044 H1F0P07305 194 aaKnown RBP12.31□□□□□ -0.44
SMARCE1-213ENST00000578044 ITGA2P17301 1181 aa12.31□□□□□ -0.44
SMARCE1-213ENST00000578044 RGS6P49758 472 aa12.31□□□□□ -0.44
SMARCE1-213ENST00000578044 SMIM11AP58511 58 aa12.31□□□□□ -0.44
SMARCE1-213ENST00000578044 TOP3AQ13472 1001 aaPredicted RBP12.31□□□□□ -0.44
SMARCE1-213ENST00000578044 MTX3Q5HYI7 312 aa12.31□□□□□ -0.44
SMARCE1-213ENST00000578044 DPY19L2P2Q6ZN68 376 aa12.31□□□□□ -0.44
SMARCE1-213ENST00000578044 IL17RELQ6ZVW7 336 aa12.31□□□□□ -0.44
SMARCE1-213ENST00000578044 USP51Q70EK9 711 aa12.31□□□□□ -0.44
SMARCE1-213ENST00000578044 MEX3DQ86XN8 651 aaKnown RBP12.31□□□□□ -0.44
SMARCE1-213ENST00000578044 POU5F2Q8N7G0 328 aa12.31□□□□□ -0.44
SMARCE1-213ENST00000578044 OR4M2Q8NGB6 313 aa12.31□□□□□ -0.44
SMARCE1-213ENST00000578044 OR13C2Q8NGS9 318 aa12.31□□□□□ -0.44
SMARCE1-213ENST00000578044 AKR7LQ8NHP1 331 aa12.31□□□□□ -0.44
SMARCE1-213ENST00000578044 LRRC37BQ96QE4 947 aa12.31□□□□□ -0.44
SMARCE1-213ENST00000578044 KCTD14Q9BQ13 255 aaPredicted RBP12.31□□□□□ -0.44
SMARCE1-213ENST00000578044 OR2J1Q9GZK6 312 aa12.31□□□□□ -0.44
SMARCE1-213ENST00000578044 TREM2Q9NZC2 230 aa12.31□□□□□ -0.44
SMARCE1-213ENST00000578044 NDUFAF4Q9P032 175 aa12.31□□□□□ -0.44
SMARCE1-213ENST00000578044 FAM32AQ9Y421 112 aaKnown RBP12.31□□□□□ -0.44
SMARCE1-213ENST00000578044 WIPI2Q9Y4P8 454 aa12.31□□□□□ -0.44
SMARCE1-213ENST00000578044 J3KTA2 159 aa12.3□□□□□ -0.44
SMARCE1-213ENST00000578044 IMPA2O14732 288 aa12.3□□□□□ -0.44
SMARCE1-213ENST00000578044 WNT9BO14905 357 aa12.3□□□□□ -0.44
SMARCE1-213ENST00000578044 SGCEO43556 437 aa12.3□□□□□ -0.44
SMARCE1-213ENST00000578044 ZNF26P17031 533 aaPredicted RBP12.3□□□□□ -0.44
SMARCE1-213ENST00000578044 CCNOP22674 350 aa12.3□□□□□ -0.44
SMARCE1-213ENST00000578044 RPL4P36578 427 aaKnown RBP12.3□□□□□ -0.44
SMARCE1-213ENST00000578044 OMPP47874 163 aa12.3□□□□□ -0.44
SMARCE1-213ENST00000578044 MESTQ5EB52 335 aa12.3□□□□□ -0.44
SMARCE1-213ENST00000578044 ZNF774Q6NX45 483 aa12.3□□□□□ -0.44
SMARCE1-213ENST00000578044 RFPL4BQ6ZWI9 263 aa12.3□□□□□ -0.44
SMARCE1-213ENST00000578044 PEG10Q86TG7 708 aaKnown RBP12.3□□□□□ -0.44
SMARCE1-213ENST00000578044 GLB1L2Q8IW92 636 aa12.3□□□□□ -0.44
SMARCE1-213ENST00000578044 ABHD4Q8TB40 342 aa12.3□□□□□ -0.44
SMARCE1-213ENST00000578044 HAVCR1Q96D42 359 aa12.3□□□□□ -0.44
SMARCE1-213ENST00000578044 SAMD8Q96LT4 415 aa12.3□□□□□ -0.44
SMARCE1-213ENST00000578044 ZNF570Q96NI8 536 aa12.3□□□□□ -0.44
SMARCE1-213ENST00000578044 FUZQ9BT04 418 aa12.3□□□□□ -0.44
SMARCE1-213ENST00000578044 RHCGQ9UBD6 479 aa12.3□□□□□ -0.44
SMARCE1-213ENST00000578044 OR6C6A6NF89 314 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 ARPC3O15145 178 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 SURF4O15260 269 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 IDH3BO43837 385 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 ABHD16AO95870 558 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 RAC2P15153 192 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 TNFRSF1AP19438 455 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 FUT4P22083 530 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 TNFSF4P23510 183 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 CRABP1P29762 137 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 MPV17P39210 176 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 YAP1P46937 504 aaKnown RBP12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 NUDT2P50583 147 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 PSME3P61289 254 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 HIST1H3AP68431 136 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 PSG7Q13046 419 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 TUSC1Q2TAM9 212 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 TMEM155Q4W5P6 130 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 TMEM255AQ5JRV8 349 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 HIST2H3PS2Q5TEC6 136 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 HIST2H3AQ71DI3 136 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 VASH1Q7L8A9 365 aaPredicted RBP12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 C1QL2Q7Z5L3 287 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 TREML1Q86YW5 311 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 ZNF283Q8N7M2 679 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 CLDN22Q8N7P3 220 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 SEMA6DQ8NFY4 1073 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 PTP4A1Q93096 173 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 FAM162AQ96A26 154 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 Q96M85 177 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 JMJD8Q96S16 334 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 OR51B6Q9H340 312 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 IL19Q9UHD0 177 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 ADAM18Q9Y3Q7 739 aa12.29□□□□□ -0.44
SMARCE1-213ENST00000578044 ARHGAP32A7KAX9 2087 aa12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 A0A1B0GWJ7 208 aa12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 A0A1W2PPL8 197 aa12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 ZSCAN5BA6NJL1 495 aa12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 TPD52L2O43399 206 aaKnown RBP12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 PLPP2O43688 288 aa12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 CDC14BO60729 498 aa12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 GMNNO75496 209 aa12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 KHDRBS3O75525 346 aaKnown RBP12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 MPZL1O95297 269 aa12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 NGFP01138 241 aa12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 HSD17B1P14061 328 aa12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 CTLA4P16410 223 aa12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 GPR4P46093 362 aa12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 COMPP49747 757 aaPredicted RBP12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 RPS6KA3P51812 740 aa12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 KRR1Q13601 381 aaKnown RBP12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 GLYATQ6IB77 296 aa12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 SLC27A4Q6P1M0 643 aa12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 SHQ1Q6PI26 577 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms