RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 MT-ND1P03886 318 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 COX5BP10606 129 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 SELEP16581 610 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 LAP3P28838 519 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 RBM34P42696 430 aaKnown RBP11.18□□□□□ -0.62
COPS3-214ENST00000577246 MMP16P51512 607 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 PCBP3P57721 371 aaKnown RBP11.18□□□□□ -0.62
COPS3-214ENST00000577246 MPP2Q14168 576 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 DUSP7Q16829 419 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 ARMC4Q5T2S8 1044 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 ZNF774Q6NX45 483 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 Q6YL49 198 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 ZNF620Q6ZNG0 422 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 RHOUQ7L0Q8 258 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 CROCCP2Q86T23 111 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 SLC30A8Q8IWU4 369 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 C1orf87Q8N0U7 546 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 C10orf111Q8N326 155 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 POU5F2Q8N7G0 328 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 ANKRD42Q8N9B4 389 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 SSMEM1Q8WWF3 244 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 RASSF5Q8WWW0 418 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 DYRK2Q92630 601 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 SPDL1Q96EA4 605 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 OR52B2Q96RD2 323 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 NUDT16L1Q9BRJ7 211 aaKnown RBP11.18□□□□□ -0.62
COPS3-214ENST00000577246 ALG12Q9BV10 488 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 PCDHAC1Q9H158 963 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 MARCH7Q9H992 704 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 GCM1Q9NP62 436 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 TNFRSF19Q9NS68 423 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 RNF114Q9Y508 228 aa11.18□□□□□ -0.62
COPS3-214ENST00000577246 PRKDCP78527 4128 aaKnown RBP11.18□□□□□ -0.62
COPS3-214ENST00000577246 TANC2Q9HCD6 1990 aa11.17□□□□□ -0.62
COPS3-214ENST00000577246 OR7A10O76100 309 aa11.17□□□□□ -0.62
COPS3-214ENST00000577246 ALX3O95076 343 aa11.17□□□□□ -0.62
COPS3-214ENST00000577246 LYPD3O95274 346 aa11.17□□□□□ -0.62
COPS3-214ENST00000577246 THY1P04216 161 aa11.17□□□□□ -0.62
COPS3-214ENST00000577246 FUT1P19526 365 aa11.17□□□□□ -0.62
COPS3-214ENST00000577246 AQP2P41181 271 aa11.17□□□□□ -0.62
COPS3-214ENST00000577246 PITPNBP48739 271 aa11.17□□□□□ -0.62
COPS3-214ENST00000577246 GUCY1A3Q02108 690 aa11.17□□□□□ -0.62
COPS3-214ENST00000577246 FMODQ06828 376 aa11.17□□□□□ -0.62
COPS3-214ENST00000577246 CYP51A1Q16850 503 aa11.17□□□□□ -0.62
COPS3-214ENST00000577246 HIST2H2BDQ6DRA6 164 aa11.17□□□□□ -0.62
COPS3-214ENST00000577246 ASPHD2Q6ICH7 369 aa11.17□□□□□ -0.62
COPS3-214ENST00000577246 SLC25A47Q6Q0C1 308 aa11.17□□□□□ -0.62
COPS3-214ENST00000577246 BLOC1S3Q6QNY0 202 aa11.17□□□□□ -0.62
COPS3-214ENST00000577246 BRD3OSQ6XYD6 125 aa11.17□□□□□ -0.62
COPS3-214ENST00000577246 VASH1Q7L8A9 365 aaPredicted RBP11.17□□□□□ -0.62
COPS3-214ENST00000577246 PATL1Q86TB9 770 aaKnown RBP11.17□□□□□ -0.62
COPS3-214ENST00000577246 MREGQ8N565 214 aa11.17□□□□□ -0.62
COPS3-214ENST00000577246 TBC1D15Q8TC07 691 aa11.17□□□□□ -0.62
COPS3-214ENST00000577246 SLC26A7Q8TE54 656 aa11.17□□□□□ -0.62
COPS3-214ENST00000577246 NMD3Q96D46 503 aaKnown RBP11.17□□□□□ -0.62
COPS3-214ENST00000577246 SGTBQ96EQ0 304 aa11.17□□□□□ -0.62
COPS3-214ENST00000577246 CHIAQ9BZP6 476 aa11.17□□□□□ -0.62
COPS3-214ENST00000577246 TCF7L1Q9HCS4 588 aa11.17□□□□□ -0.62
COPS3-214ENST00000577246 SLAMF8Q9P0V8 285 aa11.17□□□□□ -0.62
COPS3-214ENST00000577246 CLN8Q9UBY8 286 aa11.17□□□□□ -0.62
COPS3-214ENST00000577246 SOX21Q9Y651 276 aaPredicted RBP11.17□□□□□ -0.62
COPS3-214ENST00000577246 TRBV5-3A0A0A0MS03 114 aa11.16□□□□□ -0.62
COPS3-214ENST00000577246 M0QX08 132 aa11.16□□□□□ -0.62
COPS3-214ENST00000577246 PHYHO14832 338 aa11.16□□□□□ -0.62
COPS3-214ENST00000577246 POLR3GO15318 223 aaPredicted RBP11.16□□□□□ -0.62
COPS3-214ENST00000577246 ENSAO43768 121 aaKnown RBP11.16□□□□□ -0.62
COPS3-214ENST00000577246 OPN1SWP03999 348 aa11.16□□□□□ -0.62
COPS3-214ENST00000577246 MSR1P21757 451 aa11.16□□□□□ -0.62
COPS3-214ENST00000577246 SRP9P49458 86 aaKnown RBP11.16□□□□□ -0.62
COPS3-214ENST00000577246 RELBQ01201 579 aa11.16□□□□□ -0.62
COPS3-214ENST00000577246 SCRN3Q0VDG4 424 aa11.16□□□□□ -0.62
COPS3-214ENST00000577246 C2orf68Q2NKX9 166 aa11.16□□□□□ -0.62
COPS3-214ENST00000577246 Q6ZR03 302 aa11.16□□□□□ -0.62
COPS3-214ENST00000577246 ATG16L2Q8NAA4 619 aa11.16□□□□□ -0.62
COPS3-214ENST00000577246 GPR32P1Q8NGA4 272 aa11.16□□□□□ -0.62
COPS3-214ENST00000577246 HDAC2Q92769 488 aaKnown RBP11.16□□□□□ -0.62
COPS3-214ENST00000577246 DACT3Q96B18 629 aaPredicted RBP11.16□□□□□ -0.62
COPS3-214ENST00000577246 HAVCR1Q96D42 359 aa11.16□□□□□ -0.62
COPS3-214ENST00000577246 CMBLQ96DG6 245 aa11.16□□□□□ -0.62
COPS3-214ENST00000577246 POLR2J2Q9GZM3 115 aaKnown RBP11.16□□□□□ -0.62
COPS3-214ENST00000577246 POLR2J3Q9H1A7 115 aaKnown RBP11.16□□□□□ -0.62
COPS3-214ENST00000577246 TXNIPQ9H3M7 391 aa11.16□□□□□ -0.62
COPS3-214ENST00000577246 IKZF5Q9H5V7 419 aa11.16□□□□□ -0.62
COPS3-214ENST00000577246 TMEM165Q9HC07 324 aa11.16□□□□□ -0.62
COPS3-214ENST00000577246 MEPEQ9NQ76 525 aaPredicted RBP11.16□□□□□ -0.62
COPS3-214ENST00000577246 CCDC167Q9P0B6 97 aa11.16□□□□□ -0.62
COPS3-214ENST00000577246 ASH2LQ9UBL3 628 aa11.16□□□□□ -0.62
COPS3-214ENST00000577246 NOTCH1P46531 2555 aa11.16□□□□□ -0.62
COPS3-214ENST00000577246 ARHGAP32A7KAX9 2087 aa11.15□□□□□ -0.62
COPS3-214ENST00000577246 IGKV1D-43A0A0B4J1Z2 117 aa11.15□□□□□ -0.62
COPS3-214ENST00000577246 A0A1W2PPL8 197 aa11.15□□□□□ -0.62
COPS3-214ENST00000577246 J3QW42 95 aa11.15□□□□□ -0.62
COPS3-214ENST00000577246 P2RY10O00398 339 aa11.15□□□□□ -0.62
COPS3-214ENST00000577246 CLPXO76031 633 aa11.15□□□□□ -0.62
COPS3-214ENST00000577246 MELTFP08582 738 aa11.15□□□□□ -0.62
COPS3-214ENST00000577246 IRF2P14316 349 aa11.15□□□□□ -0.62
COPS3-214ENST00000577246 RAC2P15153 192 aa11.15□□□□□ -0.62
COPS3-214ENST00000577246 HTR5AP47898 357 aa11.15□□□□□ -0.62
COPS3-214ENST00000577246 FGF12P61328 243 aa11.15□□□□□ -0.62
COPS3-214ENST00000577246 HNRNPA0Q13151 305 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms