RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-211ENST00000576502 ZNF23P17027 643 aa11.86□□□□□ -0.51
NDE1-211ENST00000576502 ZNF26P17031 533 aaPredicted RBP11.86□□□□□ -0.51
NDE1-211ENST00000576502 MAGEA2P43356 314 aa11.86□□□□□ -0.51
NDE1-211ENST00000576502 HTR5AP47898 357 aa11.86□□□□□ -0.51
NDE1-211ENST00000576502 GSSP48637 474 aa11.86□□□□□ -0.51
NDE1-211ENST00000576502 HMGA2P52926 109 aa11.86□□□□□ -0.51
NDE1-211ENST00000576502 GLO1Q04760 184 aa11.86□□□□□ -0.51
NDE1-211ENST00000576502 TRAP1Q12931 704 aaKnown RBP11.86□□□□□ -0.51
NDE1-211ENST00000576502 ENDOGQ14249 297 aaKnown RBP11.86□□□□□ -0.51
NDE1-211ENST00000576502 SLC36A3Q495N2 470 aa11.86□□□□□ -0.51
NDE1-211ENST00000576502 C6orf52Q5T4I8 152 aa11.86□□□□□ -0.51
NDE1-211ENST00000576502 ZNF774Q6NX45 483 aa11.86□□□□□ -0.51
NDE1-211ENST00000576502 LEG1Q6P5S2 330 aa11.86□□□□□ -0.51
NDE1-211ENST00000576502 RINLQ6ZS11 566 aa11.86□□□□□ -0.51
NDE1-211ENST00000576502 TRPM8Q7Z2W7 1104 aa11.86□□□□□ -0.51
NDE1-211ENST00000576502 LRP11Q86VZ4 500 aa11.86□□□□□ -0.51
NDE1-211ENST00000576502 ZCCHC24Q8N2G6 241 aaKnown RBP11.86□□□□□ -0.51
NDE1-211ENST00000576502 HPS1Q92902 700 aa11.86□□□□□ -0.51
NDE1-211ENST00000576502 C4orf45Q96LM5 186 aa11.86□□□□□ -0.51
NDE1-211ENST00000576502 EMC7Q9NPA0 242 aa11.86□□□□□ -0.51
NDE1-211ENST00000576502 DECR2Q9NUI1 292 aa11.86□□□□□ -0.51
NDE1-211ENST00000576502 TMEM160Q9NX00 188 aa11.86□□□□□ -0.51
NDE1-211ENST00000576502 NKIRAS2Q9NYR9 191 aa11.86□□□□□ -0.51
NDE1-211ENST00000576502 PLEK2Q9NYT0 353 aa11.86□□□□□ -0.51
NDE1-211ENST00000576502 LPAR3Q9UBY5 353 aa11.86□□□□□ -0.51
NDE1-211ENST00000576502 ATPIF1Q9UII2 106 aa11.86□□□□□ -0.51
NDE1-211ENST00000576502 KCNS2Q9ULS6 477 aa11.86□□□□□ -0.51
NDE1-211ENST00000576502 COA3Q9Y2R0 106 aaPredicted RBP11.86□□□□□ -0.51
NDE1-211ENST00000576502 LYVE1Q9Y5Y7 322 aa11.86□□□□□ -0.51
NDE1-211ENST00000576502 CDH10Q9Y6N8 788 aa11.86□□□□□ -0.51
NDE1-211ENST00000576502 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.85□□□□□ -0.512e-6■■■■■ 54.6
NDE1-211ENST00000576502 LOC100509620A0A075B734 347 aa11.85□□□□□ -0.51
NDE1-211ENST00000576502 J3QW42 95 aa11.85□□□□□ -0.51
NDE1-211ENST00000576502 IFNA2P01563 188 aa11.85□□□□□ -0.51
NDE1-211ENST00000576502 RAP2AP10114 183 aa11.85□□□□□ -0.51
NDE1-211ENST00000576502 NAT2P11245 290 aa11.85□□□□□ -0.51
NDE1-211ENST00000576502 GPR6P46095 362 aaPredicted RBP11.85□□□□□ -0.51
NDE1-211ENST00000576502 RGS6P49758 472 aa11.85□□□□□ -0.51
NDE1-211ENST00000576502 TMEM33P57088 247 aa11.85□□□□□ -0.51
NDE1-211ENST00000576502 PPP1CBP62140 327 aa11.85□□□□□ -0.51
NDE1-211ENST00000576502 MAD2L1BPQ15013 274 aaPredicted RBP11.85□□□□□ -0.51
NDE1-211ENST00000576502 KCNMB1Q16558 191 aa11.85□□□□□ -0.51
NDE1-211ENST00000576502 MSMPQ1L6U9 139 aa11.85□□□□□ -0.51
NDE1-211ENST00000576502 CHRFAM7AQ494W8 412 aa11.85□□□□□ -0.51
NDE1-211ENST00000576502 MBNL2Q5VZF2 373 aaKnown RBP11.85□□□□□ -0.51
NDE1-211ENST00000576502 OR2T5Q6IEZ7 315 aa11.85□□□□□ -0.51
NDE1-211ENST00000576502 FAM166AQ6J272 317 aa11.85□□□□□ -0.51
NDE1-211ENST00000576502 PGBD2Q6P3X8 592 aa11.85□□□□□ -0.51
NDE1-211ENST00000576502 ZNF620Q6ZNG0 422 aa11.85□□□□□ -0.51
NDE1-211ENST00000576502 GJC3Q8NFK1 279 aa11.85□□□□□ -0.51
NDE1-211ENST00000576502 OR2T29Q8NH02 315 aa11.85□□□□□ -0.51
NDE1-211ENST00000576502 CCDC124Q96CT7 223 aaKnown RBP11.85□□□□□ -0.51
NDE1-211ENST00000576502 SAMD8Q96LT4 415 aa11.85□□□□□ -0.51
NDE1-211ENST00000576502 DCLRE1CQ96SD1 692 aaKnown RBP11.85□□□□□ -0.51
NDE1-211ENST00000576502 DIRC2Q96SL1 478 aa11.85□□□□□ -0.51
NDE1-211ENST00000576502 EGLN1Q9GZT9 426 aa11.85□□□□□ -0.51
NDE1-211ENST00000576502 NUAK2Q9H093 628 aa11.85□□□□□ -0.51
NDE1-211ENST00000576502 RACGAP1Q9H0H5 632 aa11.85□□□□□ -0.51
NDE1-211ENST00000576502 YY1AP1Q9H869 796 aa11.85□□□□□ -0.51
NDE1-211ENST00000576502 TBCCD1Q9NVR7 557 aa11.85□□□□□ -0.51
NDE1-211ENST00000576502 MYEF2Q9P2K5 600 aaKnown RBP11.85□□□□□ -0.51
NDE1-211ENST00000576502 ASH2LQ9UBL3 628 aa11.85□□□□□ -0.51
NDE1-211ENST00000576502 CDC42EP3Q9UKI2 254 aa11.85□□□□□ -0.51
NDE1-211ENST00000576502 BAIAP2Q9UQB8 552 aa11.85□□□□□ -0.51
NDE1-211ENST00000576502 SAMHD1Q9Y3Z3 626 aaKnown RBP11.85□□□□□ -0.51
NDE1-211ENST00000576502 TCRBV5S2A0A599 114 aa11.84□□□□□ -0.51
NDE1-211ENST00000576502 OR6C6A6NF89 314 aa11.84□□□□□ -0.51
NDE1-211ENST00000576502 GYG2O15488 501 aa11.84□□□□□ -0.51
NDE1-211ENST00000576502 CLPTM1O96005 669 aa11.84□□□□□ -0.51
NDE1-211ENST00000576502 TACSTD2P09758 323 aa11.84□□□□□ -0.51
NDE1-211ENST00000576502 T-ENOLP0DO92 83 aa11.84□□□□□ -0.51
NDE1-211ENST00000576502 IGHV4-31P0DP07 118 aa11.84□□□□□ -0.51
NDE1-211ENST00000576502 HNF1AP20823 631 aa11.84□□□□□ -0.51
NDE1-211ENST00000576502 PCMT1P22061 227 aa11.84□□□□□ -0.51
NDE1-211ENST00000576502 WNT5AP41221 380 aa11.84□□□□□ -0.51
NDE1-211ENST00000576502 CDKN2AP42771 156 aaKnown RBP11.84□□□□□ -0.51
NDE1-211ENST00000576502 FXYD6P3P58550 94 aa11.84□□□□□ -0.51
NDE1-211ENST00000576502 ERVS71-1P61550 626 aa11.84□□□□□ -0.51
NDE1-211ENST00000576502 PTCHD4Q6ZW05 846 aa11.84□□□□□ -0.51
NDE1-211ENST00000576502 HIPK1Q86Z02 1210 aa11.84□□□□□ -0.51
NDE1-211ENST00000576502 OR5L1Q8NGL2 311 aa11.84□□□□□ -0.51
NDE1-211ENST00000576502 OR4K13Q8NH42 304 aa11.84□□□□□ -0.51
NDE1-211ENST00000576502 SLC25A40Q8TBP6 338 aa11.84□□□□□ -0.51
NDE1-211ENST00000576502 KLF14Q8TD94 323 aaPredicted RBP11.84□□□□□ -0.51
NDE1-211ENST00000576502 MARS2Q96GW9 593 aaKnown RBP11.84□□□□□ -0.51
NDE1-211ENST00000576502 GPA33Q99795 319 aa11.84□□□□□ -0.51
NDE1-211ENST00000576502 THTPAQ9BU02 230 aa11.84□□□□□ -0.51
NDE1-211ENST00000576502 CDADC1Q9BWV3 514 aa11.84□□□□□ -0.51
NDE1-211ENST00000576502 HDHD2Q9H0R4 259 aa11.84□□□□□ -0.51
NDE1-211ENST00000576502 TAS2R1Q9NYW7 299 aa11.84□□□□□ -0.51
NDE1-211ENST00000576502 IGHV4-61A0A0C4DH41 118 aa11.83□□□□□ -0.52
NDE1-211ENST00000576502 LOC100289279A0A1B0GTE1 492 aa11.83□□□□□ -0.52
NDE1-211ENST00000576502 AQP12BA6NM10 295 aa11.83□□□□□ -0.52
NDE1-211ENST00000576502 GNGT2O14610 69 aa11.83□□□□□ -0.52
NDE1-211ENST00000576502 LMX1BO60663 402 aa11.83□□□□□ -0.52
NDE1-211ENST00000576502 HLA-DQA2P01906 255 aa11.83□□□□□ -0.52
NDE1-211ENST00000576502 HPXP02790 462 aa11.83□□□□□ -0.52
NDE1-211ENST00000576502 HIST1H1CP16403 213 aaKnown RBP11.83□□□□□ -0.52
NDE1-211ENST00000576502 ZNF16P17020 682 aaPredicted RBP11.83□□□□□ -0.52
NDE1-211ENST00000576502 TNFSF4P23510 183 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms