RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 MDC1Q14676 2089 aaKnown RBP16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 POLEQ07864 2286 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 NME2P1O60361 137 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 POU3F2P20265 443 aaPredicted RBP16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 IDH3GP51553 393 aaPredicted RBP16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 PAN3Q58A45 887 aaKnown RBP16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 SLC22A24Q8N4F4 322 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 BMFQ96LC9 184 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 PIGMQ9H3S5 423 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 EMC3Q9P0I2 261 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 TRBV11-1A0A0K0K1C0 115 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 A0A0U1RQK1 487 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 MED19A0JLT2 244 aaPredicted RBP16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 ZNF354AO60765 605 aaPredicted RBP16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 TGM6O95932 706 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 IFNA2P01563 188 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 CD53P19397 219 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 ACOT7LQ6ZUV0 252 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 LSMEM1Q8N8F7 131 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 PIGCQ92535 297 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 WDR34Q96EX3 536 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 SUSD2Q9UGT4 822 aa16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 PCYT1BQ9Y5K3 369 aaPredicted RBP16.24■□□□□ 0.19
ATPAF1-214ENST00000576409 F10P00742 488 aa16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 PSMB6P28072 239 aa16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 CX3CR1P49238 355 aa16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 OGFOD3Q6PK18 319 aa16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 CA13Q8N1Q1 262 aa16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 OR11H4Q8NGC9 324 aa16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 OR5L2Q8NGL0 311 aa16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 RPP25Q9BUL9 199 aaKnown RBP16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 LYRM4Q9HD34 91 aa16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 SNRNP200O75643 2136 aaKnown RBP16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 SERTM1A2A2V5 107 aa16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 NDUFB6O95139 128 aa16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 ANKRD34CP0C6C1 535 aa16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 RPL27P61353 136 aaKnown RBP16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 PDSS1Q5T2R2 415 aa16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 GPR137CQ8N3F9 429 aa16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 ADAMTS18Q8TE60 1221 aa16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 ASH2LQ9UBL3 628 aa16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 SHISA3A0PJX4 238 aa16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 DNAJB6O75190 326 aa16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 IGF2P01344 180 aa16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 CSNK1A1P48729 337 aa16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 MDGA2Q7Z553 956 aa16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 FAM71CQ8NEG0 241 aa16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 C19orf25Q9UFG5 118 aaPredicted RBP16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 A0A1W2PNR3 127 aa16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 SNRPGP15A8MWD9 76 aa16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 C21orf58P58505 322 aa16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 CHRDQ9H2X0 955 aa16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 B9D1Q9UPM9 204 aa16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 EXOGQ9Y2C4 368 aaKnown RBP16.23■□□□□ 0.19
ATPAF1-214ENST00000576409 A0A0B4J2E0 115 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 A0A1B0GX12 115 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 STMND1H3BQB6 276 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 XRCC3O43542 346 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 ICOSLGO75144 302 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 IGHG1P01857 330 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 CLDN17P56750 224 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 EEF1A1P68104 462 aaKnown RBP16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 LILRA6Q6PI73 481 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 RRNAD1Q96FB5 475 aaKnown RBP16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 MOGAT1Q96PD6 335 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 ABHD6Q9BV23 337 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 PCDHGA5Q9Y5G8 931 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 TDRD6O60522 2096 aaKnown RBP16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 EP300Q09472 2414 aaPredicted RBP16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 OR14A16Q8NHC5 309 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 KCNG3Q8TAE7 436 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 SECTM1Q8WVN6 248 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 JAM3Q9BX67 310 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 KLHL13Q9P2N7 655 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 RARRES3Q9UL19 164 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 RAB22AQ9UL26 194 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 FOXJ3Q9UPW0 622 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 EP400Q96L91 3159 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 SMCO3A2RU48 225 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 OR5K3A6NET4 321 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 ZNF705GA8MUZ8 300 aaPredicted RBP16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 GFERP55789 205 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 PLGLB1Q02325 96 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 PLA1AQ53H76 456 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 C1QL3Q5VWW1 255 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 FCRL6Q6DN72 434 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 BAHD1Q8TBE0 780 aaPredicted RBP16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 SEMA6CQ9H3T2 930 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 CA10Q9NS85 328 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 PCDHB10Q9UN67 800 aa16.22■□□□□ 0.19
ATPAF1-214ENST00000576409 A8MVM7 634 aa16.21■□□□□ 0.19
ATPAF1-214ENST00000576409 SULT1C2O00338 296 aa16.21■□□□□ 0.19
ATPAF1-214ENST00000576409 SLC34A2O95436 690 aa16.21■□□□□ 0.19
ATPAF1-214ENST00000576409 IFNA17P01571 189 aa16.21■□□□□ 0.19
ATPAF1-214ENST00000576409 FASLGP48023 281 aa16.21■□□□□ 0.19
ATPAF1-214ENST00000576409 POLR2HP52434 150 aaKnown RBP16.21■□□□□ 0.19
ATPAF1-214ENST00000576409 DOC2BQ14184 412 aa16.21■□□□□ 0.19
ATPAF1-214ENST00000576409 TMEM196Q5HYL7 178 aa16.21■□□□□ 0.19
ATPAF1-214ENST00000576409 WDR38Q5JTN6 314 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms