RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 LNX2Q8N448 690 aa20.19■□□□□ 0.82
SNF8-217ENST00000576353 NPEPL1Q8NDH3 523 aa20.19■□□□□ 0.82
SNF8-217ENST00000576353 OR2T33Q8NG76 320 aa20.19■□□□□ 0.82
SNF8-217ENST00000576353 OR8D4Q8NGM9 314 aa20.19■□□□□ 0.82
SNF8-217ENST00000576353 OR1J1Q8NGS3 322 aa20.19■□□□□ 0.82
SNF8-217ENST00000576353 SYNPRQ8TBG9 265 aa20.19■□□□□ 0.82
SNF8-217ENST00000576353 PDP1Q9P0J1 537 aaPredicted RBP20.19■□□□□ 0.82
SNF8-217ENST00000576353 ASH2LQ9UBL3 628 aa20.19■□□□□ 0.82
SNF8-217ENST00000576353 GPR160Q9UJ42 338 aa20.19■□□□□ 0.82
SNF8-217ENST00000576353 FZR1Q9UM11 496 aa20.19■□□□□ 0.82
SNF8-217ENST00000576353 POLR1DQ9Y2S0 133 aa20.19■□□□□ 0.82
SNF8-217ENST00000576353 A0A1W2PPW3 197 aa20.18■□□□□ 0.82
SNF8-217ENST00000576353 DOK2O60496 412 aa20.18■□□□□ 0.82
SNF8-217ENST00000576353 LY6HO94772 140 aa20.18■□□□□ 0.82
SNF8-217ENST00000576353 SOX14O95416 240 aa20.18■□□□□ 0.82
SNF8-217ENST00000576353 ARHGDIAP52565 204 aa20.18■□□□□ 0.82
SNF8-217ENST00000576353 KLF3P57682 345 aaPredicted RBP20.18■□□□□ 0.82
SNF8-217ENST00000576353 SLC36A3Q495N2 470 aa20.18■□□□□ 0.82
SNF8-217ENST00000576353 LRP11Q86VZ4 500 aa20.18■□□□□ 0.82
SNF8-217ENST00000576353 ICA1LQ8NDH6 482 aa20.18■□□□□ 0.82
SNF8-217ENST00000576353 NIPSNAP1Q9BPW8 284 aa20.18■□□□□ 0.82
SNF8-217ENST00000576353 ELOVL3Q9HB03 270 aa20.18■□□□□ 0.82
SNF8-217ENST00000576353 PLEK2Q9NYT0 353 aa20.18■□□□□ 0.82
SNF8-217ENST00000576353 IGHV4-30-2A0A087WSY4 118 aa20.17■□□□□ 0.82
SNF8-217ENST00000576353 ICMTO60725 284 aa20.17■□□□□ 0.82
SNF8-217ENST00000576353 IGFBP1P08833 259 aaPredicted RBP20.17■□□□□ 0.82
SNF8-217ENST00000576353 GAAP10253 952 aa20.17■□□□□ 0.82
SNF8-217ENST00000576353 SLC25A16P16260 332 aa20.17■□□□□ 0.82
SNF8-217ENST00000576353 WNT5AP41221 380 aa20.17■□□□□ 0.82
SNF8-217ENST00000576353 HTR5AP47898 357 aa20.17■□□□□ 0.82
SNF8-217ENST00000576353 PDLIM4P50479 330 aa20.17■□□□□ 0.82
SNF8-217ENST00000576353 ERFP50548 548 aa20.17■□□□□ 0.82
SNF8-217ENST00000576353 MOGQ16653 247 aa20.17■□□□□ 0.82
SNF8-217ENST00000576353 VASH1Q7L8A9 365 aaPredicted RBP20.17■□□□□ 0.82
SNF8-217ENST00000576353 TMEM179BQ7Z7N9 219 aa20.17■□□□□ 0.82
SNF8-217ENST00000576353 ZNF101Q8IZC7 436 aa20.17■□□□□ 0.82
SNF8-217ENST00000576353 ZCCHC24Q8N2G6 241 aaKnown RBP20.17■□□□□ 0.82
SNF8-217ENST00000576353 SLC26A10Q8NG04 563 aa20.17■□□□□ 0.82
SNF8-217ENST00000576353 OR2T4Q8NH00 348 aa20.17■□□□□ 0.82
SNF8-217ENST00000576353 SLCO4A1Q96BD0 722 aa20.17■□□□□ 0.82
SNF8-217ENST00000576353 C4orf45Q96LM5 186 aa20.17■□□□□ 0.82
SNF8-217ENST00000576353 ZNF556Q9HAH1 456 aa20.17■□□□□ 0.82
SNF8-217ENST00000576353 SLCO1C1Q9NYB5 712 aa20.17■□□□□ 0.82
SNF8-217ENST00000576353 KLHL21Q9UJP4 597 aa20.17■□□□□ 0.82
SNF8-217ENST00000576353 ARFGEF3Q5TH69 2177 aa20.17■□□□□ 0.82
SNF8-217ENST00000576353 IGLV3-9A0A075B6K5 115 aa20.16■□□□□ 0.82
SNF8-217ENST00000576353 NDUFS8O00217 210 aa20.16■□□□□ 0.82
SNF8-217ENST00000576353 LY6G6DO95868 133 aa20.16■□□□□ 0.82
SNF8-217ENST00000576353 GPANK1O95872 356 aa20.16■□□□□ 0.82
SNF8-217ENST00000576353 ALDH3B1P43353 468 aa20.16■□□□□ 0.82
SNF8-217ENST00000576353 ERVS71-1P61550 626 aa20.16■□□□□ 0.82
SNF8-217ENST00000576353 TEKQ02763 1124 aa20.16■□□□□ 0.82
SNF8-217ENST00000576353 NKPD1Q17RQ9 610 aa20.16■□□□□ 0.82
SNF8-217ENST00000576353 ZNF718Q3SXZ3 478 aa20.16■□□□□ 0.82
SNF8-217ENST00000576353 C1orf146Q5VVC0 180 aa20.16■□□□□ 0.82
SNF8-217ENST00000576353 OTPQ5XKR4 325 aa20.16■□□□□ 0.82
SNF8-217ENST00000576353 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.16■□□□□ 0.82
SNF8-217ENST00000576353 GJC3Q8NFK1 279 aa20.16■□□□□ 0.82
SNF8-217ENST00000576353 TEX47Q8TBZ9 253 aa20.16■□□□□ 0.82
SNF8-217ENST00000576353 C10orf105Q8TEF2 133 aa20.16■□□□□ 0.82
SNF8-217ENST00000576353 DDOQ99489 341 aa20.16■□□□□ 0.82
SNF8-217ENST00000576353 FN3KQ9H479 309 aa20.16■□□□□ 0.82
SNF8-217ENST00000576353 ARMC1Q9NVT9 282 aa20.16■□□□□ 0.82
SNF8-217ENST00000576353 MYEF2Q9P2K5 600 aaKnown RBP20.16■□□□□ 0.82
SNF8-217ENST00000576353 LOC390937A0A1W2PQ73 354 aa20.15■□□□□ 0.82
SNF8-217ENST00000576353 H3BN98 237 aa20.15■□□□□ 0.82
SNF8-217ENST00000576353 DEAF1O75398 565 aaPredicted RBP20.15■□□□□ 0.82
SNF8-217ENST00000576353 IFNGP01579 166 aa20.15■□□□□ 0.82
SNF8-217ENST00000576353 HLA-DQA2P01906 255 aa20.15■□□□□ 0.82
SNF8-217ENST00000576353 TP53P04637 393 aaPredicted RBP20.15■□□□□ 0.82
SNF8-217ENST00000576353 HEXAP06865 529 aa20.15■□□□□ 0.82
SNF8-217ENST00000576353 ANXA8P13928 327 aa20.15■□□□□ 0.82
SNF8-217ENST00000576353 GCH1P30793 250 aa20.15■□□□□ 0.82
SNF8-217ENST00000576353 MEP1BQ16820 701 aa20.15■□□□□ 0.82
SNF8-217ENST00000576353 ZNF362Q5T0B9 420 aaPredicted RBP20.15■□□□□ 0.82
SNF8-217ENST00000576353 CYB561A3Q8NBI2 242 aa20.15■□□□□ 0.82
SNF8-217ENST00000576353 SLC37A3Q8NCC5 494 aa20.15■□□□□ 0.82
SNF8-217ENST00000576353 OR4Q3Q8NH05 313 aa20.15■□□□□ 0.82
SNF8-217ENST00000576353 OR1F12Q8NHA8 337 aa20.15■□□□□ 0.82
SNF8-217ENST00000576353 ABHD4Q8TB40 342 aa20.15■□□□□ 0.82
SNF8-217ENST00000576353 CDADC1Q9BWV3 514 aa20.15■□□□□ 0.82
SNF8-217ENST00000576353 TAAR3PQ9P1P4 343 aa20.15■□□□□ 0.82
SNF8-217ENST00000576353 ATPIF1Q9UII2 106 aa20.15■□□□□ 0.82
SNF8-217ENST00000576353 RER1O15258 196 aa20.14■□□□□ 0.81
SNF8-217ENST00000576353 ABHD16AO95870 558 aa20.14■□□□□ 0.81
SNF8-217ENST00000576353 CLPTM1O96005 669 aa20.14■□□□□ 0.81
SNF8-217ENST00000576353 TFP02787 698 aa20.14■□□□□ 0.81
SNF8-217ENST00000576353 DAOP14920 347 aa20.14■□□□□ 0.81
SNF8-217ENST00000576353 TUBG1P23258 451 aa20.14■□□□□ 0.81
SNF8-217ENST00000576353 PPP1CBP62140 327 aa20.14■□□□□ 0.81
SNF8-217ENST00000576353 HIST1H3AP68431 136 aa20.14■□□□□ 0.81
SNF8-217ENST00000576353 MAD2L1BPQ15013 274 aaPredicted RBP20.14■□□□□ 0.81
SNF8-217ENST00000576353 CARTPTQ16568 116 aa20.14■□□□□ 0.81
SNF8-217ENST00000576353 CCDC92Q53HC0 331 aaPredicted RBP20.14■□□□□ 0.81
SNF8-217ENST00000576353 HIST2H3PS2Q5TEC6 136 aa20.14■□□□□ 0.81
SNF8-217ENST00000576353 HIST2H3AQ71DI3 136 aa20.14■□□□□ 0.81
SNF8-217ENST00000576353 PROKR2Q8NFJ6 384 aa20.14■□□□□ 0.81
SNF8-217ENST00000576353 SNX33Q8WV41 574 aa20.14■□□□□ 0.81
SNF8-217ENST00000576353 NRBF2Q96F24 287 aa20.14■□□□□ 0.81
SNF8-217ENST00000576353 MARS2Q96GW9 593 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms