RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 MARCH7Q9H992 704 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 NGBQ9NPG2 151 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 DNAJC27Q9NZQ0 273 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 ASH2LQ9UBL3 628 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 POLR1DQ9Y2S0 133 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 TIMM10BQ9Y5J6 103 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 LHFPL6Q9Y693 200 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 COMMD3-BMI1R4GMX3 469 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 SLC22A31A6NKX4 558 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 A6NNC1 897 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 RER1O15258 196 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 MPZL2O60487 215 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 ENTPD6O75354 484 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 SERPINA5P05154 406 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 MRPL3P09001 348 aaKnown RBP7.44□□□□□ -1.22
NUP88-211ENST00000575976 GNAO1P09471 354 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 SPARCP09486 303 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 CECR9P0C854 216 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 ZNF14P17017 642 aaPredicted RBP7.44□□□□□ -1.22
NUP88-211ENST00000575976 PTAFRP25105 342 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 CD40P25942 277 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 HTR1FP30939 366 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 NAA10P41227 235 aaPredicted RBP7.44□□□□□ -1.22
NUP88-211ENST00000575976 ENTPD1P49961 510 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 CDH11P55287 796 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 ISL1P61371 349 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 PCBD1P61457 104 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 HIST1H3AP68431 136 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 SCRN3Q0VDG4 424 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 AQP6Q13520 282 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 MAD2L1BPQ15013 274 aaPredicted RBP7.44□□□□□ -1.22
NUP88-211ENST00000575976 SNCBQ16143 134 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 OCLNQ16625 522 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 C3orf36Q3SXR2 165 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 CCDC92Q53HC0 331 aaPredicted RBP7.44□□□□□ -1.22
NUP88-211ENST00000575976 BEX5Q5H9J7 111 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 TEX30Q5JUR7 227 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 SLC25A30Q5SVS4 291 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 HIST2H3PS2Q5TEC6 136 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 LCN1P1Q5VSP4 162 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 SLC18B1Q6NT16 456 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 ZNF774Q6NX45 483 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 TMEM108Q6UXF1 575 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 USP51Q70EK9 711 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 HIST2H3AQ71DI3 136 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 ERI1Q8IV48 349 aaKnown RBP7.44□□□□□ -1.22
NUP88-211ENST00000575976 GID4Q8IVV7 300 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 CPEB3Q8NE35 698 aaKnown RBP7.44□□□□□ -1.22
NUP88-211ENST00000575976 OR6N2Q8NGY6 317 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 OR2AJ1Q8NGZ0 328 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 SMAP2Q8WU79 429 aaPredicted RBP7.44□□□□□ -1.22
NUP88-211ENST00000575976 APH1BQ8WW43 257 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 MAP6Q96JE9 813 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 HS3ST6Q96QI5 342 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 INTS14Q96SY0 518 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 CDADC1Q9BWV3 514 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 WNT5BQ9H1J7 359 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 ESRP2Q9H6T0 727 aaKnown RBP7.44□□□□□ -1.22
NUP88-211ENST00000575976 CYB5R1Q9UHQ9 305 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 KCNG2Q9UJ96 466 aa7.44□□□□□ -1.22
NUP88-211ENST00000575976 IQCMA0A1B0GVH7 501 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 FAM221AA4D161 298 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 ABCD4O14678 606 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 SGCEO43556 437 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 TMCC2O75069 709 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 WBP4O75554 376 aaKnown RBP7.43□□□□□ -1.22
NUP88-211ENST00000575976 APOL3O95236 402 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 PLAUP00749 431 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 CCL2P13500 99 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 APEX1P27695 318 aaKnown RBP7.43□□□□□ -1.22
NUP88-211ENST00000575976 CALCRP30988 508 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 HCCSP53701 268 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 NAAAQ02083 359 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 PLP2Q04941 152 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 BSPH1Q075Z2 132 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 SPOCK1Q08629 439 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 IL18R1Q13478 541 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 GGTLC2Q14390 218 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 PCK2Q16822 640 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 MEDAGQ5VYS4 303 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 TMEM154Q6P9G4 183 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 CFAP77Q6ZQR2 320 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 VASH1Q7L8A9 365 aaPredicted RBP7.43□□□□□ -1.22
NUP88-211ENST00000575976 SLC16A9Q7RTY1 509 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 DPY19L4Q7Z388 723 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 DCXRQ7Z4W1 244 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 C8orf59Q8N0T1 100 aaPredicted RBP7.43□□□□□ -1.22
NUP88-211ENST00000575976 SETD9Q8NE22 299 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 GJC3Q8NFK1 279 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 CNIH3Q8TBE1 160 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 RFKQ969G6 155 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 RASSF4Q9H2L5 321 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 C1orf198Q9H425 327 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 MOV10Q9HCE1 1003 aaKnown RBP7.43□□□□□ -1.22
NUP88-211ENST00000575976 CLN6Q9NWW5 311 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 HAO2Q9NYQ3 351 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 PLEK2Q9NYT0 353 aa7.43□□□□□ -1.22
NUP88-211ENST00000575976 WARS2Q9UGM6 360 aaKnown RBP7.43□□□□□ -1.22
NUP88-211ENST00000575976 GDF2Q9UK05 429 aaPredicted RBP7.43□□□□□ -1.22
NUP88-211ENST00000575976 FBXL3Q9UKT7 428 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms