RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 SLC2A10O95528 541 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 IGF2P01344 180 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 LIPFP07098 398 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 MELTFP08582 738 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 COX5BP10606 129 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 AQP1P29972 269 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 PITPNBP48739 271 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 SRP9P49458 86 aaKnown RBP7.52□□□□□ -1.21
SMG6-218ENST00000575454 MMP16P51512 607 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 UGT2B15P54855 530 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 STX1BP61266 288 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 ERVK-25P63136 954 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 GUCY1A3Q02108 690 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 RPL18Q07020 188 aaKnown RBP7.52□□□□□ -1.21
SMG6-218ENST00000575454 CD47Q08722 323 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 SPRNQ5BIV9 151 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 TMEM255AQ5JRV8 349 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 ENTPD8Q5MY95 495 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 ARMC4Q5T2S8 1044 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 CD276Q5ZPR3 534 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 GDPGP1Q6ZNW5 385 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 C1QL4Q86Z23 238 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 ATG16L2Q8NAA4 619 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 LINC01006Q8NI28 216 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 FAM110DQ8TAY7 271 aaPredicted RBP7.52□□□□□ -1.21
SMG6-218ENST00000575454 ADAMTS16Q8TE57 1224 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 ITLN1Q8WWA0 313 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 GATAD2BQ8WXI9 593 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 PTP4A1Q93096 173 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 HAVCR1Q96D42 359 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 PAIP2Q9BPZ3 127 aaKnown RBP7.52□□□□□ -1.21
SMG6-218ENST00000575454 ZNF426Q9BUY5 554 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 ALG12Q9BV10 488 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 TRIM15Q9C019 465 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 WNT5BQ9H1J7 359 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 GCM1Q9NP62 436 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 KCNK9Q9NPC2 374 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 CLN8Q9UBY8 286 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 SLC7A7Q9UM01 511 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 SOX21Q9Y651 276 aaPredicted RBP7.52□□□□□ -1.21
SMG6-218ENST00000575454 C3orf80F5H4A9 247 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 J3QW42 95 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 M0R3H8 397 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 PIN1P1O15428 100 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 SNNO75324 88 aaPredicted RBP7.51□□□□□ -1.21
SMG6-218ENST00000575454 MT-ND1P03886 318 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 F13BP05160 661 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 KITP10721 976 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 IRF2P14316 349 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 HOXB9P17482 250 aaPredicted RBP7.51□□□□□ -1.21
SMG6-218ENST00000575454 GPX2P18283 190 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 FUT1P19526 365 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 LAP3P28838 519 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 RBM34P42696 430 aaKnown RBP7.51□□□□□ -1.21
SMG6-218ENST00000575454 PROK1P58294 105 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 FGF12P61328 243 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 ZNF181Q2M3W8 571 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 KRT71Q3SY84 523 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 SLC30A8Q8IWU4 369 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 FITM2Q8N6M3 262 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 SMYD1Q8NB12 490 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 C11orf65Q8NCR3 313 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 OR6T1Q8NGN1 323 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 OR9I1Q8NGQ6 314 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 OR13G1Q8NGZ3 307 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 LRTOMTQ8WZ04 291 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 NSMAFQ92636 917 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 NMD3Q96D46 503 aaKnown RBP7.51□□□□□ -1.21
SMG6-218ENST00000575454 CMBLQ96DG6 245 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 WFDC6Q9BQY6 131 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 TXNIPQ9H3M7 391 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 SLC25A37Q9NYZ2 338 aa7.51□□□□□ -1.21
SMG6-218ENST00000575454 NUP214P35658 2090 aaPredicted RBP7.5□□□□□ -1.21
SMG6-218ENST00000575454 HTR3EA5X5Y0 456 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 ZNF879B4DU55 563 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 M0QX08 132 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 GPR137BO60478 399 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 OR7A10O76100 309 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 LYPD3O95274 346 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 CSF1P09603 554 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 RAC2P15153 192 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 CD247P20963 164 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 MSR1P21757 451 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 AQP2P41181 271 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 MRPL19P49406 292 aaKnown RBP7.5□□□□□ -1.21
SMG6-218ENST00000575454 NPY4RP50391 375 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 PCBP3P57721 371 aaKnown RBP7.5□□□□□ -1.21
SMG6-218ENST00000575454 KRTAP10-3P60369 221 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 SCRN3Q0VDG4 424 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 KCNJ8Q15842 424 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 DUSP7Q16829 419 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 ZNF404Q494X3 552 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 KPRPQ5T749 579 aaPredicted RBP7.5□□□□□ -1.21
SMG6-218ENST00000575454 WDR25Q64LD2 544 aaPredicted RBP7.5□□□□□ -1.21
SMG6-218ENST00000575454 SLC25A47Q6Q0C1 308 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 Q6ZR03 302 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 PATL1Q86TB9 770 aaKnown RBP7.5□□□□□ -1.21
SMG6-218ENST00000575454 MSRB3Q8IXL7 192 aa7.5□□□□□ -1.21
SMG6-218ENST00000575454 ZSCAN4Q8NAM6 433 aaPredicted RBP7.5□□□□□ -1.21
SMG6-218ENST00000575454 OR5L1Q8NGL2 311 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms