RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 CAB39Q9Y376 341 aaPredicted RBP21.09■□□□□ 0.97
ATPAF1-213ENST00000574428 SMG1Q96Q15 3661 aaKnown RBP21.09■□□□□ 0.97
ATPAF1-213ENST00000574428 CCL21O00585 134 aa21.08■□□□□ 0.97
ATPAF1-213ENST00000574428 CNOT4O95628 575 aaKnown RBP21.08■□□□□ 0.97
ATPAF1-213ENST00000574428 OR8G3PP0DMU2 310 aa21.08■□□□□ 0.97
ATPAF1-213ENST00000574428 OPRM1P35372 400 aa21.08■□□□□ 0.97
ATPAF1-213ENST00000574428 WNT4P56705 351 aa21.08■□□□□ 0.97
ATPAF1-213ENST00000574428 OR12D2P58182 307 aa21.08■□□□□ 0.97
ATPAF1-213ENST00000574428 LSAMPQ13449 338 aa21.08■□□□□ 0.97
ATPAF1-213ENST00000574428 UBE2UQ5VVX9 321 aa21.08■□□□□ 0.97
ATPAF1-213ENST00000574428 TMEM211Q6ICI0 200 aa21.08■□□□□ 0.97
ATPAF1-213ENST00000574428 TMPRSS11AQ6ZMR5 421 aa21.08■□□□□ 0.97
ATPAF1-213ENST00000574428 SKA3Q8IX90 412 aa21.08■□□□□ 0.97
ATPAF1-213ENST00000574428 ZNF485Q8NCK3 441 aa21.08■□□□□ 0.97
ATPAF1-213ENST00000574428 OR2AJ1Q8NGZ0 328 aa21.08■□□□□ 0.97
ATPAF1-213ENST00000574428 OR52N1Q8NH53 320 aa21.08■□□□□ 0.97
ATPAF1-213ENST00000574428 FBXO17Q96EF6 278 aa21.08■□□□□ 0.97
ATPAF1-213ENST00000574428 MAP6Q96JE9 813 aa21.08■□□□□ 0.97
ATPAF1-213ENST00000574428 FUNDC2Q9BWH2 189 aa21.08■□□□□ 0.97
ATPAF1-213ENST00000574428 J3QLW9 94 aa21.08■□□□□ 0.96
ATPAF1-213ENST00000574428 NOL3O60936 208 aaKnown RBP21.08■□□□□ 0.96
ATPAF1-213ENST00000574428 LYZL6O75951 148 aa21.08■□□□□ 0.96
ATPAF1-213ENST00000574428 ATE1O95260 518 aa21.08■□□□□ 0.96
ATPAF1-213ENST00000574428 ZNF19P17023 458 aa21.08■□□□□ 0.96
ATPAF1-213ENST00000574428 PSMB9P28065 219 aa21.08■□□□□ 0.96
ATPAF1-213ENST00000574428 SH3BGRP55822 239 aaPredicted RBP21.08■□□□□ 0.96
ATPAF1-213ENST00000574428 ACTA2P62736 377 aa21.08■□□□□ 0.96
ATPAF1-213ENST00000574428 ACTG2P63267 376 aa21.08■□□□□ 0.96
ATPAF1-213ENST00000574428 SPHARQ15513 63 aa21.08■□□□□ 0.96
ATPAF1-213ENST00000574428 CDONQ4KMG0 1287 aa21.08■□□□□ 0.96
ATPAF1-213ENST00000574428 ZNF627Q7L945 461 aa21.08■□□□□ 0.96
ATPAF1-213ENST00000574428 GABRG1Q8N1C3 465 aa21.08■□□□□ 0.96
ATPAF1-213ENST00000574428 OR1K1Q8NGR3 316 aa21.08■□□□□ 0.96
ATPAF1-213ENST00000574428 OR52N5Q8NH56 324 aa21.08■□□□□ 0.96
ATPAF1-213ENST00000574428 FCGR1BQ92637 280 aa21.08■□□□□ 0.96
ATPAF1-213ENST00000574428 RND1Q92730 232 aa21.08■□□□□ 0.96
ATPAF1-213ENST00000574428 GNG8Q9UK08 70 aa21.08■□□□□ 0.96
ATPAF1-213ENST00000574428 PHYHO14832 338 aa21.07■□□□□ 0.96
ATPAF1-213ENST00000574428 RER1O15258 196 aa21.07■□□□□ 0.96
ATPAF1-213ENST00000574428 CST2P09228 141 aa21.07■□□□□ 0.96
ATPAF1-213ENST00000574428 PATE4P0C8F1 98 aa21.07■□□□□ 0.96
ATPAF1-213ENST00000574428 HSMCR30P0CW71 290 aa21.07■□□□□ 0.96
ATPAF1-213ENST00000574428 AQP6Q13520 282 aa21.07■□□□□ 0.96
ATPAF1-213ENST00000574428 IGFBP7Q16270 282 aa21.07■□□□□ 0.96
ATPAF1-213ENST00000574428 NRN1LQ496H8 165 aa21.07■□□□□ 0.96
ATPAF1-213ENST00000574428 LRRN1Q6UXK5 716 aa21.07■□□□□ 0.96
ATPAF1-213ENST00000574428 ZNF367Q7RTV3 350 aa21.07■□□□□ 0.96
ATPAF1-213ENST00000574428 LUZP2Q86TE4 346 aa21.07■□□□□ 0.96
ATPAF1-213ENST00000574428 ASB17Q8WXJ9 295 aa21.07■□□□□ 0.96
ATPAF1-213ENST00000574428 SLCO1C1Q9NYB5 712 aa21.07■□□□□ 0.96
ATPAF1-213ENST00000574428 IKZF2Q9UKS7 526 aa21.07■□□□□ 0.96
ATPAF1-213ENST00000574428 POLEQ07864 2286 aa21.06■□□□□ 0.96
ATPAF1-213ENST00000574428 FARS2O95363 451 aaKnown RBP21.06■□□□□ 0.96
ATPAF1-213ENST00000574428 TSC22D1Q15714 1073 aa21.06■□□□□ 0.96
ATPAF1-213ENST00000574428 HIKESHIQ53FT3 197 aa21.06■□□□□ 0.96
ATPAF1-213ENST00000574428 ZNF684Q5T5D7 378 aa21.06■□□□□ 0.96
ATPAF1-213ENST00000574428 PLEKHG7Q6ZR37 379 aa21.06■□□□□ 0.96
ATPAF1-213ENST00000574428 SLC16A12Q6ZSM3 486 aa21.06■□□□□ 0.96
ATPAF1-213ENST00000574428 SLC16A14Q7RTX9 510 aa21.06■□□□□ 0.96
ATPAF1-213ENST00000574428 LIX1LQ8IVB5 337 aa21.06■□□□□ 0.96
ATPAF1-213ENST00000574428 FGFBP3Q8TAT2 258 aa21.06■□□□□ 0.96
ATPAF1-213ENST00000574428 C1orf198Q9H425 327 aa21.06■□□□□ 0.96
ATPAF1-213ENST00000574428 ZNF629Q9UEG4 869 aaPredicted RBP21.06■□□□□ 0.96
ATPAF1-213ENST00000574428 MRM2Q9UI43 246 aaKnown RBP21.06■□□□□ 0.96
ATPAF1-213ENST00000574428 EEF1E1-BLOC1S5C9J1V9 151 aa21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 EEF1E1O43324 174 aaKnown RBP21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 RAD51DO75771 328 aa21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 MT-ND5P03915 603 aa21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 COX5AP20674 150 aa21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 EGR3Q06889 387 aa21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 ANKRD16Q6P6B7 361 aa21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 ZNF474Q6S9Z5 364 aaPredicted RBP21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 BEND4Q6ZU67 534 aa21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 FJX1Q86VR8 437 aa21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 CXorf67Q86X51 503 aaPredicted RBP21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 KLBQ86Z14 1044 aa21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 ZNF433Q8N7K0 673 aaPredicted RBP21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 OR10S1Q8NGN2 331 aa21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 RAB2BQ8WUD1 216 aa21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 SLAMF6Q96DU3 332 aa21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 YIPF6Q96EC8 236 aa21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 MRPL48Q96GC5 212 aaKnown RBP21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 OR8B4Q96RC9 309 aa21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 ACOXLQ9NUZ1 547 aa21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 ENPP5Q9UJA9 477 aa21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 TRIM64BA6NI03 449 aa21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 LALBAP00709 142 aa21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 KRT8P05787 483 aa21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 UQCRFS1P47985 274 aa21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 TIGD6Q17RP2 521 aa21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 ANKRD13BQ86YJ7 626 aa21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 SYS1Q8N2H4 156 aa21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 BCL2L2Q92843 193 aaPredicted RBP21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 CENPMQ9NSP4 180 aa21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 ZNF224Q9NZL3 707 aa21.05■□□□□ 0.96
ATPAF1-213ENST00000574428 GNLYP22749 145 aa21.04■□□□□ 0.96
ATPAF1-213ENST00000574428 CAPZA2P47755 286 aa21.04■□□□□ 0.96
ATPAF1-213ENST00000574428 TGFBR3Q03167 851 aa21.04■□□□□ 0.96
ATPAF1-213ENST00000574428 KCTD18Q6PI47 426 aaPredicted RBP21.04■□□□□ 0.96
ATPAF1-213ENST00000574428 KRT77Q7Z794 578 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms