RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 CSN2P05814 226 aa17.12■□□□□ 0.33
SCARF1-206ENST00000573852 CD37P11049 281 aa17.12■□□□□ 0.33
SCARF1-206ENST00000573852 OR4S1Q8NGB4 309 aa17.12■□□□□ 0.33
SCARF1-206ENST00000573852 EDAQ92838 391 aa17.12■□□□□ 0.33
SCARF1-206ENST00000573852 CDCA3Q99618 268 aaPredicted RBP17.12■□□□□ 0.33
SCARF1-206ENST00000573852 VSX1Q9NZR4 365 aaPredicted RBP17.12■□□□□ 0.33
SCARF1-206ENST00000573852 A0A0D9SG52 128 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 FITM1A5D6W6 292 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 TMEM235A6NFC5 223 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 CCSO14618 274 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 LMX1BO60663 402 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 SLC25A12O75746 678 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 CD74P04233 296 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 ICAM2P13598 275 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 AGTR1P30556 359 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 MRPS21P82921 87 aaKnown RBP17.11■□□□□ 0.33
SCARF1-206ENST00000573852 HYAL1Q12794 435 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 JMJD6Q6NYC1 403 aaPredicted RBP17.11■□□□□ 0.33
SCARF1-206ENST00000573852 LRFN4Q6PJG9 635 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 ADGRE4PQ86SQ3 457 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 KCNRGQ8N5I3 272 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 JAGN1Q8N5M9 183 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 SEC22AQ96IW7 307 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 LRRC61Q9BV99 259 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 TXNIPQ9H3M7 391 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 BARX1Q9HBU1 254 aaPredicted RBP17.11■□□□□ 0.33
SCARF1-206ENST00000573852 PLCL2Q9UPR0 1127 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 EMC9Q9Y3B6 208 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 PIAS3Q9Y6X2 628 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 SEC16AO15027 2179 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 C10orf142B7Z368 130 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 IGKV3-11P04433 115 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 FSTP19883 344 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 NKPD1Q17RQ9 610 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 LRRC37A5PQ49AS3 106 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 CORO6Q6QEF8 472 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 SOHLH2Q9NX45 425 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 VSIG4Q9Y279 399 aa17.11■□□□□ 0.33
SCARF1-206ENST00000573852 IGHV5-51A0A0C4DH38 117 aa17.1■□□□□ 0.33
SCARF1-206ENST00000573852 SRSF10O75494 262 aaKnown RBP17.1■□□□□ 0.33
SCARF1-206ENST00000573852 DDAH2O95865 285 aa17.1■□□□□ 0.33
SCARF1-206ENST00000573852 CD34P28906 385 aa17.1■□□□□ 0.33
SCARF1-206ENST00000573852 CAPZBP47756 277 aa17.1■□□□□ 0.33
SCARF1-206ENST00000573852 BEX5Q5H9J7 111 aa17.1■□□□□ 0.33
SCARF1-206ENST00000573852 FBXO46Q6PJ61 603 aaPredicted RBP17.1■□□□□ 0.33
SCARF1-206ENST00000573852 OR13C3Q8NGS6 347 aa17.1■□□□□ 0.33
SCARF1-206ENST00000573852 ZNF721Q8TF20 911 aa17.1■□□□□ 0.33
SCARF1-206ENST00000573852 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.1■□□□□ 0.33
SCARF1-206ENST00000573852 ZNF75AQ96N20 296 aa17.1■□□□□ 0.33
SCARF1-206ENST00000573852 ZNF587Q96SQ5 575 aaPredicted RBP17.1■□□□□ 0.33
SCARF1-206ENST00000573852 SLCO5A1Q9H2Y9 848 aa17.1■□□□□ 0.33
SCARF1-206ENST00000573852 TNFSF18Q9UNG2 199 aa17.1■□□□□ 0.33
SCARF1-206ENST00000573852 COA3Q9Y2R0 106 aaPredicted RBP17.1■□□□□ 0.33
SCARF1-206ENST00000573852 NOP16Q9Y3C1 178 aaKnown RBP17.1■□□□□ 0.33
SCARF1-206ENST00000573852 CPAMD8Q8IZJ3 1885 aa17.1■□□□□ 0.33
SCARF1-206ENST00000573852 PCDH15Q96QU1 1955 aa17.1■□□□□ 0.33
SCARF1-206ENST00000573852 WIPF3A6NGB9 483 aa17.1■□□□□ 0.33
SCARF1-206ENST00000573852 GP1BBP13224 206 aa17.1■□□□□ 0.33
SCARF1-206ENST00000573852 OR1D4P47884 311 aa17.1■□□□□ 0.33
SCARF1-206ENST00000573852 PPM1FP49593 454 aaPredicted RBP17.1■□□□□ 0.33
SCARF1-206ENST00000573852 LUMP51884 338 aaPredicted RBP17.1■□□□□ 0.33
SCARF1-206ENST00000573852 GFERP55789 205 aa17.1■□□□□ 0.33
SCARF1-206ENST00000573852 RP1P56715 2156 aa17.1■□□□□ 0.33
SCARF1-206ENST00000573852 TAF13Q15543 124 aa17.1■□□□□ 0.33
SCARF1-206ENST00000573852 CD163Q86VB7 1156 aa17.1■□□□□ 0.33
SCARF1-206ENST00000573852 NUDT9Q9BW91 350 aa17.1■□□□□ 0.33
SCARF1-206ENST00000573852 GPN3Q9UHW5 284 aaPredicted RBP17.1■□□□□ 0.33
SCARF1-206ENST00000573852 MRTO4Q9UKD2 239 aaKnown RBP17.1■□□□□ 0.33
SCARF1-206ENST00000573852 ARPC4-TTLL3A0A0A6YYG9 625 aa17.09■□□□□ 0.33
SCARF1-206ENST00000573852 H0YIG0 161 aa17.09■□□□□ 0.33
SCARF1-206ENST00000573852 DXOO77932 396 aaKnown RBP17.09■□□□□ 0.33
SCARF1-206ENST00000573852 MT-ATP6P00846 226 aa17.09■□□□□ 0.33
SCARF1-206ENST00000573852 HLA-AP01891 365 aaKnown RBP17.09■□□□□ 0.33
SCARF1-206ENST00000573852 DRD1P21728 446 aa17.09■□□□□ 0.33
SCARF1-206ENST00000573852 IL12BP29460 328 aa17.09■□□□□ 0.33
SCARF1-206ENST00000573852 DNASE1L1P49184 302 aa17.09■□□□□ 0.33
SCARF1-206ENST00000573852 SRSF4Q08170 494 aaKnown RBP17.09■□□□□ 0.33
SCARF1-206ENST00000573852 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.09■□□□□ 0.33
SCARF1-206ENST00000573852 C11orf87Q6NUJ2 197 aa17.09■□□□□ 0.33
SCARF1-206ENST00000573852 MOB3CQ70IA8 216 aa17.09■□□□□ 0.33
SCARF1-206ENST00000573852 ACBD4Q8NC06 268 aa17.09■□□□□ 0.33
SCARF1-206ENST00000573852 OR4D6Q8NGJ1 314 aa17.09■□□□□ 0.33
SCARF1-206ENST00000573852 OR52N5Q8NH56 324 aa17.09■□□□□ 0.33
SCARF1-206ENST00000573852 OR11A1Q9GZK7 315 aa17.09■□□□□ 0.33
SCARF1-206ENST00000573852 TMED7-TICAM2A0A0A6YYA0 188 aa17.09■□□□□ 0.33
SCARF1-206ENST00000573852 LOC107986453A0A1B0GWG9 222 aa17.09■□□□□ 0.33
SCARF1-206ENST00000573852 DNASE2O00115 360 aaPredicted RBP17.09■□□□□ 0.33
SCARF1-206ENST00000573852 NR0B1P51843 470 aaKnown RBP17.09■□□□□ 0.33
SCARF1-206ENST00000573852 EFNA3P52797 238 aa17.09■□□□□ 0.33
SCARF1-206ENST00000573852 ZP2Q05996 745 aa17.09■□□□□ 0.33
SCARF1-206ENST00000573852 FGL1Q08830 312 aa17.09■□□□□ 0.33
SCARF1-206ENST00000573852 ELP2Q6IA86 826 aa17.09■□□□□ 0.33
SCARF1-206ENST00000573852 PAPD4Q6PIY7 484 aaKnown RBP17.09■□□□□ 0.33
SCARF1-206ENST00000573852 KDM8Q8N371 416 aa17.09■□□□□ 0.33
SCARF1-206ENST00000573852 NKD1Q969G9 470 aa17.09■□□□□ 0.33
SCARF1-206ENST00000573852 ZBTB8AQ96BR9 441 aa17.09■□□□□ 0.33
SCARF1-206ENST00000573852 TGM7Q96PF1 710 aa17.09■□□□□ 0.33
SCARF1-206ENST00000573852 VRK1Q99986 396 aaPredicted RBP17.09■□□□□ 0.33
SCARF1-206ENST00000573852 PDCD10Q9BUL8 212 aa17.09■□□□□ 0.33
SCARF1-206ENST00000573852 HHLA2Q9UM44 414 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms