RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 M0QX08 132 aa16.6■□□□□ 0.25
CCDC40-206ENST00000572083 OR7A10O76100 309 aa16.6■□□□□ 0.25
CCDC40-206ENST00000572083 CST2P09228 141 aa16.6■□□□□ 0.25
CCDC40-206ENST00000572083 FUT1P19526 365 aa16.6■□□□□ 0.25
CCDC40-206ENST00000572083 ERFP50548 548 aa16.6■□□□□ 0.25
CCDC40-206ENST00000572083 TOP3AQ13472 1001 aaPredicted RBP16.6■□□□□ 0.25
CCDC40-206ENST00000572083 CYP51A1Q16850 503 aa16.6■□□□□ 0.25
CCDC40-206ENST00000572083 SLC25A47Q6Q0C1 308 aa16.6■□□□□ 0.25
CCDC40-206ENST00000572083 KLBQ86Z14 1044 aa16.6■□□□□ 0.25
CCDC40-206ENST00000572083 C11orf65Q8NCR3 313 aa16.6■□□□□ 0.25
CCDC40-206ENST00000572083 ZNF420Q8TAQ5 688 aaPredicted RBP16.6■□□□□ 0.25
CCDC40-206ENST00000572083 RAB40AQ8WXH6 277 aa16.6■□□□□ 0.25
CCDC40-206ENST00000572083 DACT3Q96B18 629 aaPredicted RBP16.6■□□□□ 0.25
CCDC40-206ENST00000572083 GCM1Q9NP62 436 aa16.6■□□□□ 0.25
CCDC40-206ENST00000572083 MAN2C1Q9NTJ4 1040 aa16.6■□□□□ 0.25
CCDC40-206ENST00000572083 STX18Q9P2W9 335 aaKnown RBP16.6■□□□□ 0.25
CCDC40-206ENST00000572083 TIMM10BQ9Y5J6 103 aa16.6■□□□□ 0.25
CCDC40-206ENST00000572083 A0A1W2PPL8 197 aa16.59■□□□□ 0.25
CCDC40-206ENST00000572083 CLPSL1A2RUU4 121 aa16.59■□□□□ 0.25
CCDC40-206ENST00000572083 NDUFA7O95182 113 aa16.59■□□□□ 0.25
CCDC40-206ENST00000572083 MT-ND1P03886 318 aa16.59■□□□□ 0.25
CCDC40-206ENST00000572083 CD247P20963 164 aa16.59■□□□□ 0.25
CCDC40-206ENST00000572083 MRPL19P49406 292 aaKnown RBP16.59■□□□□ 0.25
CCDC40-206ENST00000572083 ASPHD2Q6ICH7 369 aa16.59■□□□□ 0.25
CCDC40-206ENST00000572083 ARL9Q6T311 187 aa16.59■□□□□ 0.25
CCDC40-206ENST00000572083 NPEPL1Q8NDH3 523 aa16.59■□□□□ 0.25
CCDC40-206ENST00000572083 PRDM13Q9H4Q3 707 aa16.59■□□□□ 0.25
CCDC40-206ENST00000572083 C20orf141Q9NUB4 165 aa16.59■□□□□ 0.25
CCDC40-206ENST00000572083 SURF4O15260 269 aa16.58■□□□□ 0.24
CCDC40-206ENST00000572083 CYB5R3P00387 301 aaPredicted RBP16.58■□□□□ 0.24
CCDC40-206ENST00000572083 KITLGP21583 273 aa16.58■□□□□ 0.24
CCDC40-206ENST00000572083 PCBD1P61457 104 aa16.58■□□□□ 0.24
CCDC40-206ENST00000572083 ENDOGQ14249 297 aaKnown RBP16.58■□□□□ 0.24
CCDC40-206ENST00000572083 RUNDC3AQ59EK9 446 aa16.58■□□□□ 0.24
CCDC40-206ENST00000572083 RUSC1-AS1Q66K80 236 aa16.58■□□□□ 0.24
CCDC40-206ENST00000572083 EPGNQ6UW88 154 aa16.58■□□□□ 0.24
CCDC40-206ENST00000572083 NKAIN4Q8IVV8 208 aa16.58■□□□□ 0.24
CCDC40-206ENST00000572083 OR10AD1Q8NGE0 317 aa16.58■□□□□ 0.24
CCDC40-206ENST00000572083 TMEM255BQ8WV15 326 aa16.58■□□□□ 0.24
CCDC40-206ENST00000572083 CMBLQ96DG6 245 aa16.58■□□□□ 0.24
CCDC40-206ENST00000572083 SGTBQ96EQ0 304 aa16.58■□□□□ 0.24
CCDC40-206ENST00000572083 NUDT16L1Q9BRJ7 211 aaKnown RBP16.58■□□□□ 0.24
CCDC40-206ENST00000572083 PCDHAC1Q9H158 963 aa16.58■□□□□ 0.24
CCDC40-206ENST00000572083 NDRG4Q9ULP0 352 aaKnown RBP16.58■□□□□ 0.24
CCDC40-206ENST00000572083 ZNF281Q9Y2X9 895 aa16.58■□□□□ 0.24
CCDC40-206ENST00000572083 USH1CQ9Y6N9 552 aa16.58■□□□□ 0.24
CCDC40-206ENST00000572083 GMNCA6NCL1 334 aa16.57■□□□□ 0.24
CCDC40-206ENST00000572083 POLR3GO15318 223 aaPredicted RBP16.57■□□□□ 0.24
CCDC40-206ENST00000572083 TSPAN15O95858 294 aa16.57■□□□□ 0.24
CCDC40-206ENST00000572083 NR2C1P13056 603 aa16.57■□□□□ 0.24
CCDC40-206ENST00000572083 SELEP16581 610 aa16.57■□□□□ 0.24
CCDC40-206ENST00000572083 FGF12P61328 243 aa16.57■□□□□ 0.24
CCDC40-206ENST00000572083 SELPLGQ14242 412 aa16.57■□□□□ 0.24
CCDC40-206ENST00000572083 LAPTM4AQ15012 233 aa16.57■□□□□ 0.24
CCDC40-206ENST00000572083 SLC27A4Q6P1M0 643 aa16.57■□□□□ 0.24
CCDC40-206ENST00000572083 OR5AS1Q8N127 324 aa16.57■□□□□ 0.24
CCDC40-206ENST00000572083 TAMM41Q96BW9 452 aa16.57■□□□□ 0.24
CCDC40-206ENST00000572083 TMEM246Q9BRR3 403 aa16.57■□□□□ 0.24
CCDC40-206ENST00000572083 TXNIPQ9H3M7 391 aa16.57■□□□□ 0.24
CCDC40-206ENST00000572083 TMEM165Q9HC07 324 aa16.57■□□□□ 0.24
CCDC40-206ENST00000572083 MIOXQ9UGB7 285 aa16.57■□□□□ 0.24
CCDC40-206ENST00000572083 IGHV3-64DA0A0J9YX35 117 aa16.56■□□□□ 0.24
CCDC40-206ENST00000572083 KIR2DS1A0A191URI9 304 aa16.56■□□□□ 0.24
CCDC40-206ENST00000572083 TSPAN19P0C672 248 aa16.56■□□□□ 0.24
CCDC40-206ENST00000572083 HTR5AP47898 357 aa16.56■□□□□ 0.24
CCDC40-206ENST00000572083 MTPNP58546 118 aa16.56■□□□□ 0.24
CCDC40-206ENST00000572083 GPR157Q5UAW9 335 aa16.56■□□□□ 0.24
CCDC40-206ENST00000572083 FAM205BPQ63HN1 556 aa16.56■□□□□ 0.24
CCDC40-206ENST00000572083 WDR93Q6P2C0 686 aa16.56■□□□□ 0.24
CCDC40-206ENST00000572083 DLEU7Q6UYE1 221 aa16.56■□□□□ 0.24
CCDC40-206ENST00000572083 Q6YL49 198 aa16.56■□□□□ 0.24
CCDC40-206ENST00000572083 FITM2Q8N6M3 262 aa16.56■□□□□ 0.24
CCDC40-206ENST00000572083 ATG16L2Q8NAA4 619 aa16.56■□□□□ 0.24
CCDC40-206ENST00000572083 NEIL1Q96FI4 390 aaPredicted RBP16.56■□□□□ 0.24
CCDC40-206ENST00000572083 PLEKHA8Q96JA3 519 aa16.56■□□□□ 0.24
CCDC40-206ENST00000572083 ALG12Q9BV10 488 aa16.56■□□□□ 0.24
CCDC40-206ENST00000572083 TBCCD1Q9NVR7 557 aa16.56■□□□□ 0.24
CCDC40-206ENST00000572083 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.56■□□□□ 0.24
CCDC40-206ENST00000572083 STARD10Q9Y365 291 aa16.56■□□□□ 0.24
CCDC40-206ENST00000572083 RNF114Q9Y508 228 aa16.56■□□□□ 0.24
CCDC40-206ENST00000572083 V9GYY5 206 aaPredicted RBP16.56■□□□□ 0.24
CCDC40-206ENST00000572083 NPIPB13A6NJU9 1138 aa16.55■□□□□ 0.24
CCDC40-206ENST00000572083 NPIPB4C9JG80 1138 aa16.55■□□□□ 0.24
CCDC40-206ENST00000572083 DOK2O60496 412 aa16.55■□□□□ 0.24
CCDC40-206ENST00000572083 SCG5P05408 212 aa16.55■□□□□ 0.24
CCDC40-206ENST00000572083 MELTFP08582 738 aa16.55■□□□□ 0.24
CCDC40-206ENST00000572083 VIMP08670 466 aaKnown RBP16.55■□□□□ 0.24
CCDC40-206ENST00000572083 MSR1P21757 451 aa16.55■□□□□ 0.24
CCDC40-206ENST00000572083 GUCA1AP43080 201 aaPredicted RBP16.55■□□□□ 0.24
CCDC40-206ENST00000572083 PITPNBP48739 271 aa16.55■□□□□ 0.24
CCDC40-206ENST00000572083 GUCY1A3Q02108 690 aa16.55■□□□□ 0.24
CCDC40-206ENST00000572083 TAF9Q16594 264 aa16.55■□□□□ 0.24
CCDC40-206ENST00000572083 AGKQ53H12 422 aa16.55■□□□□ 0.24
CCDC40-206ENST00000572083 ALG10Q5BKT4 473 aa16.55■□□□□ 0.24
CCDC40-206ENST00000572083 C1orf94Q6P1W5 598 aa16.55■□□□□ 0.24
CCDC40-206ENST00000572083 FOXL2NBQ6ZUU3 175 aa16.55■□□□□ 0.24
CCDC40-206ENST00000572083 OR8B3Q8NGG8 313 aa16.55■□□□□ 0.24
CCDC40-206ENST00000572083 SLC26A7Q8TE54 656 aa16.55■□□□□ 0.24
CCDC40-206ENST00000572083 RBP7Q96R05 134 aa16.55■□□□□ 0.24
CCDC40-206ENST00000572083 OR8B2Q96RD0 313 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms