RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 AQP4P55087 323 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 MTPNP58546 118 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 TRA2BP62995 288 aaKnown RBP5.75□□□□□ -1.49
CHD3-213ENST00000571249 EMX1Q04741 257 aaPredicted RBP5.75□□□□□ -1.49
CHD3-213ENST00000571249 ZNF763Q0D2J5 394 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 QPRTQ15274 297 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 ATP6AP1Q15904 470 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 TSTQ16762 297 aaKnown RBP5.75□□□□□ -1.49
CHD3-213ENST00000571249 NDUFAF6Q330K2 333 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 PCGF3Q3KNV8 242 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 SLC25A53Q5H9E4 307 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 DHRS7BQ6IAN0 325 aaPredicted RBP5.75□□□□□ -1.49
CHD3-213ENST00000571249 SLC35E4Q6ICL7 350 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 OR4F3Q6IEY1 312 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 LIN54Q6MZP7 749 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 ERICH5Q6P6B1 374 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 BTNL3Q6UXE8 466 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 LRRN1Q6UXK5 716 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 ABHD12BQ7Z5M8 362 aaPredicted RBP5.75□□□□□ -1.49
CHD3-213ENST00000571249 POMGNT2Q8NAT1 580 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 ICA1LQ8NDH6 482 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 IL17RDQ8NFM7 739 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 OR2T12Q8NG77 320 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 OR7A2PQ8NGA2 310 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 CLHC1Q8NHS4 586 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 MAGEE2Q8TD90 523 aaPredicted RBP5.75□□□□□ -1.49
CHD3-213ENST00000571249 ST8SIA4Q92187 359 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 DACT3Q96B18 629 aaPredicted RBP5.75□□□□□ -1.49
CHD3-213ENST00000571249 COG8Q96MW5 612 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 RCHY1Q96PM5 261 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 DIRC2Q96SL1 478 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 PRPF18Q99633 342 aaKnown RBP5.75□□□□□ -1.49
CHD3-213ENST00000571249 DUSP26Q9BV47 211 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 VCXQ9H320 206 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 GHITMQ9H3K2 345 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 NELFAQ9H3P2 528 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 REEP4Q9H6H4 257 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 MAGIXQ9H6Y5 334 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 TMEM165Q9HC07 324 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 SLC35C2Q9NQQ7 365 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 UBQLN4Q9NRR5 601 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 DECR2Q9NUI1 292 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 GIMAP4Q9NUV9 329 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 TAS2R7Q9NYW3 318 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 TAAR3PQ9P1P4 343 aa5.75□□□□□ -1.49
CHD3-213ENST00000571249 A0A1W2PQD3 144 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 ZNF503-AS2A6NEH8 195 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 EVPLLA8MZ36 301 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 ZNF587BE7ETH6 402 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 H3BS24 57 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 CXCR6O00574 342 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 ANGPTL7O43827 346 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 PCDH7O60245 1069 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 INMTO95050 263 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 IL3P08700 152 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 RAP2AP10114 183 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 MAKP20794 623 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 FRKP42685 505 aaPredicted RBP5.74□□□□□ -1.49
CHD3-213ENST00000571249 CDKN2CP42773 168 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 MAGEA2P43356 314 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 NCBP2P52298 156 aaKnown RBP eCLIP5.74□□□□□ -1.49
CHD3-213ENST00000571249 GTF2A1P52655 376 aaPredicted RBP5.74□□□□□ -1.49
CHD3-213ENST00000571249 OR2B6P58173 313 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 TXNL4AP83876 142 aaKnown RBP5.74□□□□□ -1.49
CHD3-213ENST00000571249 MED21Q13503 144 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 CYP51A1Q16850 503 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 GTDC1Q4AE62 458 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 SYT14P1Q58G82 188 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 TCTEX1D4Q5JR98 221 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 GPR157Q5UAW9 335 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 AAED1Q7RTV5 226 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 ZNF551Q7Z340 670 aaPredicted RBP5.74□□□□□ -1.49
CHD3-213ENST00000571249 MDP1Q86V88 176 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 OR2L13Q8N349 312 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 SDR9C7Q8NEX9 313 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 OR4F17Q8NGA8 305 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 OR10A6Q8NH74 314 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 ADAMTS16Q8TE57 1224 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 C16orf78Q8WTQ4 265 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 ZG16BQ96DA0 208 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 FAM120BQ96EK7 910 aaKnown RBP5.74□□□□□ -1.49
CHD3-213ENST00000571249 ELMOD3Q96FG2 381 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 OR4F4Q96R69 305 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 C9orf16Q9BUW7 83 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 THUMPD3Q9BV44 507 aaKnown RBP5.74□□□□□ -1.49
CHD3-213ENST00000571249 Q9H521 79 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 YY1AP1Q9H869 796 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 PATZ1Q9HBE1 687 aaKnown RBP5.74□□□□□ -1.49
CHD3-213ENST00000571249 EQTNQ9NQ60 294 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 SERINC1Q9NRX5 453 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 TBC1D23Q9NUY8 699 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 DCAF13Q9NV06 445 aaKnown RBP5.74□□□□□ -1.49
CHD3-213ENST00000571249 ATAD3AQ9NVI7 634 aa5.74□□□□□ -1.49
CHD3-213ENST00000571249 DDX18Q9NVP1 670 aaKnown RBP5.74□□□□□ -1.49
CHD3-213ENST00000571249 NUP214P35658 2090 aaPredicted RBP5.73□□□□□ -1.49
CHD3-213ENST00000571249 GNG14A0A1W2PPG7 69 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 TTC36A6NLP5 189 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 A8MXK9 166 aa5.73□□□□□ -1.49
CHD3-213ENST00000571249 GTPBP1O00178 669 aaKnown RBP5.73□□□□□ -1.49
CHD3-213ENST00000571249 CLIC1O00299 241 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms