RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 OTULINQ96BN8 352 aa13.09□□□□□ -0.31
RAB40B-203ENST00000570676 CNBD2Q96M20 576 aa13.09□□□□□ -0.31
RAB40B-203ENST00000570676 NMNAT3Q96T66 252 aa13.09□□□□□ -0.31
RAB40B-203ENST00000570676 CA10Q9NS85 328 aa13.09□□□□□ -0.31
RAB40B-203ENST00000570676 PRSS37A4D1T9 235 aa13.08□□□□□ -0.32
RAB40B-203ENST00000570676 FAM183AA6NL82 134 aa13.08□□□□□ -0.32
RAB40B-203ENST00000570676 M0R3G1 203 aa13.08□□□□□ -0.32
RAB40B-203ENST00000570676 CD5LO43866 347 aa13.08□□□□□ -0.32
RAB40B-203ENST00000570676 MPZL2O60487 215 aa13.08□□□□□ -0.32
RAB40B-203ENST00000570676 RENP00797 406 aa13.08□□□□□ -0.32
RAB40B-203ENST00000570676 CRYAAP02489 173 aa13.08□□□□□ -0.32
RAB40B-203ENST00000570676 PGA4P0DJD7 388 aa13.08□□□□□ -0.32
RAB40B-203ENST00000570676 PGA3P0DJD8 388 aa13.08□□□□□ -0.32
RAB40B-203ENST00000570676 CBR1P16152 277 aa13.08□□□□□ -0.32
RAB40B-203ENST00000570676 PAICSP22234 425 aaKnown RBP13.08□□□□□ -0.32
RAB40B-203ENST00000570676 MYF6P23409 242 aa13.08□□□□□ -0.32
RAB40B-203ENST00000570676 EFNB1P98172 346 aa13.08□□□□□ -0.32
RAB40B-203ENST00000570676 RAB35Q15286 201 aa13.08□□□□□ -0.32
RAB40B-203ENST00000570676 ADIPOQQ15848 244 aa13.08□□□□□ -0.32
RAB40B-203ENST00000570676 CLEC2AQ6UVW9 174 aa13.08□□□□□ -0.32
RAB40B-203ENST00000570676 THAP5Q7Z6K1 395 aa13.08□□□□□ -0.32
RAB40B-203ENST00000570676 ENTHD1Q8IYW4 607 aa13.08□□□□□ -0.32
RAB40B-203ENST00000570676 NOXO1Q8NFA2 376 aa13.08□□□□□ -0.32
RAB40B-203ENST00000570676 FBXO17Q96EF6 278 aa13.08□□□□□ -0.32
RAB40B-203ENST00000570676 LRR1Q96L50 414 aa13.08□□□□□ -0.32
RAB40B-203ENST00000570676 KCNK17Q96T54 332 aa13.08□□□□□ -0.32
RAB40B-203ENST00000570676 RHNO1Q9BSD3 238 aa13.08□□□□□ -0.32
RAB40B-203ENST00000570676 ALG12Q9BV10 488 aa13.08□□□□□ -0.32
RAB40B-203ENST00000570676 FN3KQ9H479 309 aa13.08□□□□□ -0.32
RAB40B-203ENST00000570676 NOX3Q9HBY0 568 aa13.08□□□□□ -0.32
RAB40B-203ENST00000570676 MOV10Q9HCE1 1003 aaKnown RBP13.08□□□□□ -0.32
RAB40B-203ENST00000570676 LRRC42Q9Y546 428 aa13.08□□□□□ -0.32
RAB40B-203ENST00000570676 HSPE1-MOB4S4R3N1 261 aa13.08□□□□□ -0.32
RAB40B-203ENST00000570676 SONP18583 2426 aaKnown RBP13.07□□□□□ -0.32
RAB40B-203ENST00000570676 SLC22A23A1A5C7 686 aa13.07□□□□□ -0.32
RAB40B-203ENST00000570676 OR6C68A6NDL8 312 aa13.07□□□□□ -0.32
RAB40B-203ENST00000570676 KIAA1324LA8MWY0 1029 aaPredicted RBP13.07□□□□□ -0.32
RAB40B-203ENST00000570676 CENPBD1B2RD01 187 aa13.07□□□□□ -0.32
RAB40B-203ENST00000570676 PRR23D1E9PI22 279 aaPredicted RBP13.07□□□□□ -0.32
RAB40B-203ENST00000570676 DENRO43583 198 aaKnown RBP13.07□□□□□ -0.32
RAB40B-203ENST00000570676 AHCYL1O43865 530 aa13.07□□□□□ -0.32
RAB40B-203ENST00000570676 LY6HO94772 140 aa13.07□□□□□ -0.32
RAB40B-203ENST00000570676 PRR23D2P0DMB1 279 aaPredicted RBP13.07□□□□□ -0.32
RAB40B-203ENST00000570676 CSNK1A1P48729 337 aa13.07□□□□□ -0.32
RAB40B-203ENST00000570676 IDH3GP51553 393 aaPredicted RBP13.07□□□□□ -0.32
RAB40B-203ENST00000570676 EFNA4P52798 201 aa13.07□□□□□ -0.32
RAB40B-203ENST00000570676 DSCR9P59020 149 aa13.07□□□□□ -0.32
RAB40B-203ENST00000570676 ISL1P61371 349 aa13.07□□□□□ -0.32
RAB40B-203ENST00000570676 SNRPGP62308 76 aaKnown RBP13.07□□□□□ -0.32
RAB40B-203ENST00000570676 HGFACQ04756 655 aa13.07□□□□□ -0.32
RAB40B-203ENST00000570676 CD47Q08722 323 aa13.07□□□□□ -0.32
RAB40B-203ENST00000570676 MAD2L1BPQ15013 274 aaPredicted RBP13.07□□□□□ -0.32
RAB40B-203ENST00000570676 PLBD1Q6P4A8 553 aa13.07□□□□□ -0.32
RAB40B-203ENST00000570676 ZNF627Q7L945 461 aa13.07□□□□□ -0.32
RAB40B-203ENST00000570676 CXXC5Q7LFL8 322 aaKnown RBP13.07□□□□□ -0.32
RAB40B-203ENST00000570676 MDP1Q86V88 176 aa13.07□□□□□ -0.32
RAB40B-203ENST00000570676 CPOQ8IVL8 374 aa13.07□□□□□ -0.32
RAB40B-203ENST00000570676 NUP37Q8NFH4 326 aa13.07□□□□□ -0.32
RAB40B-203ENST00000570676 OR6N1Q8NGY5 312 aa13.07□□□□□ -0.32
RAB40B-203ENST00000570676 RHOXF1Q8NHV9 184 aa13.07□□□□□ -0.32
RAB40B-203ENST00000570676 NANOS1Q8WY41 292 aaKnown RBP13.07□□□□□ -0.32
RAB40B-203ENST00000570676 SORCS2Q96PQ0 1159 aa13.07□□□□□ -0.32
RAB40B-203ENST00000570676 SNX18Q96RF0 628 aa13.07□□□□□ -0.32
RAB40B-203ENST00000570676 DDOQ99489 341 aa13.07□□□□□ -0.32
RAB40B-203ENST00000570676 KCNS3Q9BQ31 491 aa13.07□□□□□ -0.32
RAB40B-203ENST00000570676 MRPL13Q9BYD1 178 aaKnown RBP13.07□□□□□ -0.32
RAB40B-203ENST00000570676 SYT4Q9H2B2 425 aa13.07□□□□□ -0.32
RAB40B-203ENST00000570676 MED20Q9H944 212 aa13.07□□□□□ -0.32
RAB40B-203ENST00000570676 HINT3Q9NQE9 182 aaKnown RBP13.07□□□□□ -0.32
RAB40B-203ENST00000570676 RPRD1BQ9NQG5 326 aaKnown RBP13.07□□□□□ -0.32
RAB40B-203ENST00000570676 ZNF224Q9NZL3 707 aa13.07□□□□□ -0.32
RAB40B-203ENST00000570676 VSX1Q9NZR4 365 aaPredicted RBP13.07□□□□□ -0.32
RAB40B-203ENST00000570676 AASSQ9UDR5 926 aa13.07□□□□□ -0.32
RAB40B-203ENST00000570676 IGHV2OR16-5A0A0B4J2B6 119 aa13.06□□□□□ -0.32
RAB40B-203ENST00000570676 GPRIN2O60269 458 aa13.06□□□□□ -0.32
RAB40B-203ENST00000570676 CRLF1O75462 422 aa13.06□□□□□ -0.32
RAB40B-203ENST00000570676 B4GALT1P15291 398 aa13.06□□□□□ -0.32
RAB40B-203ENST00000570676 GABRB1P18505 474 aa13.06□□□□□ -0.32
RAB40B-203ENST00000570676 ARR3P36575 388 aa13.06□□□□□ -0.32
RAB40B-203ENST00000570676 SNRPD2P62316 118 aaKnown RBP13.06□□□□□ -0.32
RAB40B-203ENST00000570676 MED21Q13503 144 aa13.06□□□□□ -0.32
RAB40B-203ENST00000570676 EFNB3Q15768 340 aa13.06□□□□□ -0.32
RAB40B-203ENST00000570676 KRT80Q6KB66 452 aa13.06□□□□□ -0.32
RAB40B-203ENST00000570676 BCDIN3DQ7Z5W3 292 aaKnown RBP13.06□□□□□ -0.32
RAB40B-203ENST00000570676 OR9Q1Q8NGQ5 310 aa13.06□□□□□ -0.32
RAB40B-203ENST00000570676 C10orf105Q8TEF2 133 aa13.06□□□□□ -0.32
RAB40B-203ENST00000570676 FAM168AQ92567 244 aa13.06□□□□□ -0.32
RAB40B-203ENST00000570676 TMEM54Q969K7 222 aa13.06□□□□□ -0.32
RAB40B-203ENST00000570676 ZNF75AQ96N20 296 aa13.06□□□□□ -0.32
RAB40B-203ENST00000570676 RBP7Q96R05 134 aa13.06□□□□□ -0.32
RAB40B-203ENST00000570676 HCAR1Q9BXC0 346 aa13.06□□□□□ -0.32
RAB40B-203ENST00000570676 ULBP2Q9BZM5 246 aa13.06□□□□□ -0.32
RAB40B-203ENST00000570676 RERGLQ9H628 205 aa13.06□□□□□ -0.32
RAB40B-203ENST00000570676 ZNF442Q9H7R0 627 aa13.06□□□□□ -0.32
RAB40B-203ENST00000570676 CLN6Q9NWW5 311 aa13.06□□□□□ -0.32
RAB40B-203ENST00000570676 B3GNT2Q9NY97 397 aa13.06□□□□□ -0.32
RAB40B-203ENST00000570676 GLTPQ9NZD2 209 aa13.06□□□□□ -0.32
RAB40B-203ENST00000570676 DNAJC27Q9NZQ0 273 aa13.06□□□□□ -0.32
RAB40B-203ENST00000570676 PMF1-BGLAPU3KQ54 211 aa13.06□□□□□ -0.32
RAB40B-203ENST00000570676 ANK3Q12955 4377 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms