RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 RACGAP1Q9H0H5 632 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 TAAR3PQ9P1P4 343 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 ASH2LQ9UBL3 628 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 NDRG4Q9ULP0 352 aaKnown RBP11.16□□□□□ -0.62
CNOT1-220ENST00000569916 SAMHD1Q9Y3Z3 626 aaKnown RBP11.16□□□□□ -0.62
CNOT1-220ENST00000569916 U3KQV3 271 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 IGHV4-61A0A0C4DH41 118 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 AQP12BA6NM10 295 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 BHLHE40O14503 412 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 GYG2O15488 501 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 SGCEO43556 437 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 IDH3BO43837 385 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 NCR1O76036 304 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 RENP00797 406 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 NGFP01138 241 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 TP53P04637 393 aaPredicted RBP11.15□□□□□ -0.62
CNOT1-220ENST00000569916 NAT2P11245 290 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 USF1P22415 310 aaPredicted RBP11.15□□□□□ -0.62
CNOT1-220ENST00000569916 GIFP27352 417 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 NOS3P29474 1203 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 HTR5AP47898 357 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 GGTLC2Q14390 218 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 MEP1BQ16820 701 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 NKPD1Q17RQ9 610 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 ALKBH6Q3KRA9 238 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 CLEC12AQ5QGZ9 265 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 SPATA46Q5T0L3 261 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 RASSF6Q6ZTQ3 369 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 VASH1Q7L8A9 365 aaPredicted RBP11.15□□□□□ -0.62
CNOT1-220ENST00000569916 ZBTB46Q86UZ6 589 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 AQP12AQ8IXF9 295 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 OR6V1Q8N148 313 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 ZNF786Q8N393 782 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 SDR9C7Q8NEX9 313 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 OR52L1Q8NGH7 329 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 UBASH3BQ8TF42 649 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 CANT1Q8WVQ1 401 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 MARS2Q96GW9 593 aaKnown RBP11.15□□□□□ -0.62
CNOT1-220ENST00000569916 FN3KQ9H479 309 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 REEP1Q9H902 201 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 RPRD1BQ9NQG5 326 aaKnown RBP11.15□□□□□ -0.62
CNOT1-220ENST00000569916 PLEK2Q9NYT0 353 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 IL20Q9NYY1 176 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 EIF3KQ9UBQ5 218 aaKnown RBP11.15□□□□□ -0.62
CNOT1-220ENST00000569916 B9D1Q9UPM9 204 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 ABCA1O95477 2261 aa11.15□□□□□ -0.62
CNOT1-220ENST00000569916 HIVEP2P31629 2446 aa11.15□□□□□ -0.63
CNOT1-220ENST00000569916 TANC2Q9HCD6 1990 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 DHRS12A0PJE2 317 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 OR6C68A6NDL8 312 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 OR6C6A6NF89 314 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 LYNX1G3V0Z9 82 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 IGHV3-13P01766 116 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 HPXP02790 462 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 LYNX1P0DP58 116 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 MPV17P39210 176 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 SELENOVP59797 346 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 PPP1CBP62140 327 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 PPP2R2BQ00005 443 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 GLO1Q04760 184 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.14□□□□□ -0.63
CNOT1-220ENST00000569916 GK3PQ14409 553 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 MICAQ29983 383 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 KRTAP21-3Q3LHN1 58 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 CCDC92Q53HC0 331 aaPredicted RBP11.14□□□□□ -0.63
CNOT1-220ENST00000569916 ELFN2Q5R3F8 820 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 SLC35F1Q5T1Q4 408 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 MBNL2Q5VZF2 373 aaKnown RBP11.14□□□□□ -0.63
CNOT1-220ENST00000569916 UNQ6126/PRO20091Q6UXV3 157 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 NPEPL1Q8NDH3 523 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 SLC26A10Q8NG04 563 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 OR52E2Q8NGJ4 325 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 ABHD4Q8TB40 342 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 SLC25A40Q8TBP6 338 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 IPCEF1Q8WWN9 437 aaPredicted RBP11.14□□□□□ -0.63
CNOT1-220ENST00000569916 C4orf45Q96LM5 186 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 CHID1Q9BWS9 393 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 DGCR6LQ9BY27 220 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 OR2J1Q9GZK6 312 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 SRA1Q9HD15 236 aaKnown RBP11.14□□□□□ -0.63
CNOT1-220ENST00000569916 HINT3Q9NQE9 182 aaKnown RBP11.14□□□□□ -0.63
CNOT1-220ENST00000569916 TBC1D23Q9NUY8 699 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 SLCO1C1Q9NYB5 712 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 LHFPL6Q9Y693 200 aa11.14□□□□□ -0.63
CNOT1-220ENST00000569916 NAV3Q8IVL0 2385 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 ABCA2Q9BZC7 2435 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 C17orf100A8MU93 164 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 H3BSA7 217 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 RER1O15258 196 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 TLX2O43763 284 aaPredicted RBP11.13□□□□□ -0.63
CNOT1-220ENST00000569916 DNAJC8O75937 253 aaPredicted RBP11.13□□□□□ -0.63
CNOT1-220ENST00000569916 SOX14O95416 240 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 ABHD16AO95870 558 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 CST1P01037 141 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 TFP02787 698 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 IGHV4-31P0DP07 118 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 ZNF16P17020 682 aaPredicted RBP11.13□□□□□ -0.63
CNOT1-220ENST00000569916 MAGEB1P43366 347 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 CENPAP49450 140 aa11.13□□□□□ -0.63
CNOT1-220ENST00000569916 HIST1H3AP68431 136 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms