RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 TXNIPQ9H3M7 391 aa10.12□□□□□ -0.79
CAPN3-220ENST00000569827 CYSLTR2Q9NS75 346 aa10.12□□□□□ -0.79
CAPN3-220ENST00000569827 PDP1Q9P0J1 537 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-220ENST00000569827 OR5V1Q9UGF6 321 aa10.12□□□□□ -0.79
CAPN3-220ENST00000569827 RIMS3Q9UJD0 308 aa10.12□□□□□ -0.79
CAPN3-220ENST00000569827 PPP1R3CQ9UQK1 317 aa10.12□□□□□ -0.79
CAPN3-220ENST00000569827 NDUFAF1Q9Y375 327 aa10.12□□□□□ -0.79
CAPN3-220ENST00000569827 A8MXK9 166 aa10.11□□□□□ -0.79
CAPN3-220ENST00000569827 CENPBD1B2RD01 187 aa10.11□□□□□ -0.79
CAPN3-220ENST00000569827 H0YL77 283 aa10.11□□□□□ -0.79
CAPN3-220ENST00000569827 DOK2O60496 412 aa10.11□□□□□ -0.79
CAPN3-220ENST00000569827 IFI30P13284 250 aa10.11□□□□□ -0.79
CAPN3-220ENST00000569827 RPS2P15880 293 aaKnown RBP10.11□□□□□ -0.79
CAPN3-220ENST00000569827 YAP1P46937 504 aaKnown RBP10.11□□□□□ -0.79
CAPN3-220ENST00000569827 GZMMP51124 257 aa10.11□□□□□ -0.79
CAPN3-220ENST00000569827 MMP16P51512 607 aa10.11□□□□□ -0.79
CAPN3-220ENST00000569827 ARHGDIAP52565 204 aa10.11□□□□□ -0.79
CAPN3-220ENST00000569827 CTXN1P60606 82 aa10.11□□□□□ -0.79
CAPN3-220ENST00000569827 PAX8Q06710 450 aa10.11□□□□□ -0.79
CAPN3-220ENST00000569827 VMACQ2NL98 169 aa10.11□□□□□ -0.79
CAPN3-220ENST00000569827 DEFB112Q30KQ8 113 aa10.11□□□□□ -0.79
CAPN3-220ENST00000569827 TMEM155Q4W5P6 130 aa10.11□□□□□ -0.79
CAPN3-220ENST00000569827 RABL3Q5HYI8 236 aa10.11□□□□□ -0.79
CAPN3-220ENST00000569827 RUSC1-AS1Q66K80 236 aa10.11□□□□□ -0.79
CAPN3-220ENST00000569827 HDDC2Q7Z4H3 204 aa10.11□□□□□ -0.79
CAPN3-220ENST00000569827 ALDH16A1Q8IZ83 802 aa10.11□□□□□ -0.79
CAPN3-220ENST00000569827 SSBP3Q9BWW4 388 aaPredicted RBP10.11□□□□□ -0.79
CAPN3-220ENST00000569827 MARCH7Q9H992 704 aa10.11□□□□□ -0.79
CAPN3-220ENST00000569827 ZMAT3Q9HA38 289 aaKnown RBP10.11□□□□□ -0.79
CAPN3-220ENST00000569827 SMURF2Q9HAU4 748 aa10.11□□□□□ -0.79
CAPN3-220ENST00000569827 ELOVL3Q9HB03 270 aa10.11□□□□□ -0.79
CAPN3-220ENST00000569827 PTTG3PQ9NZH4 202 aa10.11□□□□□ -0.79
CAPN3-220ENST00000569827 POLR3KQ9Y2Y1 108 aaPredicted RBP10.11□□□□□ -0.79
CAPN3-220ENST00000569827 STARD10Q9Y365 291 aa10.11□□□□□ -0.79
CAPN3-220ENST00000569827 TIMM10BQ9Y5J6 103 aa10.11□□□□□ -0.79
CAPN3-220ENST00000569827 TMEM178BH3BS89 294 aa10.1□□□□□ -0.79
CAPN3-220ENST00000569827 IMPA2O14732 288 aa10.1□□□□□ -0.79
CAPN3-220ENST00000569827 DBHP09172 617 aa10.1□□□□□ -0.79
CAPN3-220ENST00000569827 TSPAN19P0C672 248 aa10.1□□□□□ -0.79
CAPN3-220ENST00000569827 GSTM3P21266 225 aa10.1□□□□□ -0.79
CAPN3-220ENST00000569827 MSR1P21757 451 aa10.1□□□□□ -0.79
CAPN3-220ENST00000569827 TNFSF4P23510 183 aa10.1□□□□□ -0.79
CAPN3-220ENST00000569827 LIPAP38571 399 aa10.1□□□□□ -0.79
CAPN3-220ENST00000569827 MDH2P40926 338 aaKnown RBP10.1□□□□□ -0.79
CAPN3-220ENST00000569827 RBM34P42696 430 aaKnown RBP10.1□□□□□ -0.79
CAPN3-220ENST00000569827 RPL27P61353 136 aaKnown RBP10.1□□□□□ -0.79
CAPN3-220ENST00000569827 PAX2Q02962 417 aa10.1□□□□□ -0.79
CAPN3-220ENST00000569827 DBPQ10586 325 aaPredicted RBP10.1□□□□□ -0.79
CAPN3-220ENST00000569827 ZMAT1Q5H9K5 638 aa10.1□□□□□ -0.79
CAPN3-220ENST00000569827 DPP10Q8N608 796 aa10.1□□□□□ -0.79
CAPN3-220ENST00000569827 POU5F2Q8N7G0 328 aa10.1□□□□□ -0.79
CAPN3-220ENST00000569827 ATG16L2Q8NAA4 619 aa10.1□□□□□ -0.79
CAPN3-220ENST00000569827 LRRC75AQ8NAA5 344 aa10.1□□□□□ -0.79
CAPN3-220ENST00000569827 OR13C2Q8NGS9 318 aa10.1□□□□□ -0.79
CAPN3-220ENST00000569827 OR51A7Q8NH64 312 aa10.1□□□□□ -0.79
CAPN3-220ENST00000569827 WFDC12Q8WWY7 111 aa10.1□□□□□ -0.79
CAPN3-220ENST00000569827 SAMD8Q96LT4 415 aa10.1□□□□□ -0.79
CAPN3-220ENST00000569827 ALG12Q9BV10 488 aa10.1□□□□□ -0.79
CAPN3-220ENST00000569827 GCM1Q9NP62 436 aa10.1□□□□□ -0.79
CAPN3-220ENST00000569827 POLE4Q9NR33 117 aa10.1□□□□□ -0.79
CAPN3-220ENST00000569827 RHCGQ9UBD6 479 aa10.1□□□□□ -0.79
CAPN3-220ENST00000569827 CGGBP1Q9UFW8 167 aaPredicted RBP10.1□□□□□ -0.79
CAPN3-220ENST00000569827 MED31Q9Y3C7 131 aa10.1□□□□□ -0.79
CAPN3-220ENST00000569827 ADAM18Q9Y3Q7 739 aa10.1□□□□□ -0.79
CAPN3-220ENST00000569827 IGHV2-70DA0A0C4DH43 119 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 FAM181BA6NEQ2 426 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 H3BSA7 217 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 J3KTA2 159 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 FBP2O00757 339 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 ICMTO60725 284 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 OR5F1O95221 314 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 PLATP00750 562 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 WNT2P09544 360 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 TNFRSF1AP19438 455 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 KRTAP10-3P60369 221 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 GNB2P62879 340 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 RELBQ01201 579 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 LRRC23Q53EV4 343 aaPredicted RBP10.09□□□□□ -0.79
CAPN3-220ENST00000569827 INTS11Q5TA45 600 aaKnown RBP10.09□□□□□ -0.79
CAPN3-220ENST00000569827 OR2T2Q6IF00 324 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 FIP1L1Q6UN15 594 aaKnown RBP10.09□□□□□ -0.79
CAPN3-220ENST00000569827 LYPD2Q6UXB3 125 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 UNQ6126/PRO20091Q6UXV3 157 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 FOXL2NBQ6ZUU3 175 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 CCDC80Q76M96 950 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 VASH1Q7L8A9 365 aaPredicted RBP10.09□□□□□ -0.79
CAPN3-220ENST00000569827 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.09□□□□□ -0.79
CAPN3-220ENST00000569827 KLBQ86Z14 1044 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 C1QL4Q86Z23 238 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 SLC30A8Q8IWU4 369 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 BHLHE23Q8NDY6 225 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 OR10S1Q8NGN2 331 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 TPD52L3Q96J77 140 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 RBP7Q96R05 134 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 RERGLQ9H628 205 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 WDR76Q9H967 626 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 GMPR2Q9P2T1 348 aaKnown RBP10.09□□□□□ -0.79
CAPN3-220ENST00000569827 STX18Q9P2W9 335 aaKnown RBP10.09□□□□□ -0.79
CAPN3-220ENST00000569827 HIF3AQ9Y2N7 669 aa10.09□□□□□ -0.79
CAPN3-220ENST00000569827 TET2Q6N021 2002 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms