RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 PNLDC1Q8NA58 520 aaKnown RBP9.83□□□□□ -0.84
CLK3-226ENST00000569406 OR5AP2Q8NGF4 316 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 ABHD3Q8WU67 409 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 TFGQ92734 400 aaPredicted RBP9.83□□□□□ -0.84
CLK3-226ENST00000569406 SCAMP4Q969E2 229 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 OR8B4Q96RC9 309 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 EIF5A2Q9GZV4 153 aaKnown RBP9.83□□□□□ -0.84
CLK3-226ENST00000569406 COMMD4Q9H0A8 199 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 ARV1Q9H2C2 271 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 IL21RQ9HBE5 538 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 NAP1L6A6NFF2 107 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 AQP7P3A6NL99 342 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 NPIPA2E9PIF3 369 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 REM1O75628 298 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 CD74P04233 296 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 C8AP07357 584 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 LIPCP11150 499 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 METAP1P53582 386 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 SLC16A1P53985 500 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 PRKAG1P54619 331 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 RPS23P62266 143 aaKnown RBP9.83□□□□□ -0.84
CLK3-226ENST00000569406 MST1LQ2TV78 715 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 GGTA1PQ4G0N0 100 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 C11orf87Q6NUJ2 197 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 TNFAIP8L2Q6P589 184 aaPredicted RBP9.83□□□□□ -0.84
CLK3-226ENST00000569406 ZNF615Q8N8J6 731 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 OR5L2Q8NGL0 311 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 SP7Q8TDD2 431 aaPredicted RBP9.83□□□□□ -0.84
CLK3-226ENST00000569406 LIPHQ8WWY8 451 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 RIOK2Q9BVS4 552 aaKnown RBP9.83□□□□□ -0.84
CLK3-226ENST00000569406 SYT4Q9H2B2 425 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 EXO5Q9H790 373 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 GPR52Q9Y2T5 361 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 WIF1Q9Y5W5 379 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 ENPP4Q9Y6X5 453 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 TMEM269A0A1B0GVZ9 245 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 GXYLT2A0PJZ3 443 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 RNF222A6NCQ9 220 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 RPL36A-HNRNPH2H7BZ11 118 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 IGSF6O95976 241 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 LAMA1P25391 3075 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 SERPINA4P29622 427 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 NTSP30990 170 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 HMGN3Q15651 99 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 CCSMST1Q4G0I0 132 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 GXYLT1Q4G148 440 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 LDLRAD2Q5SZI1 272 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 PRPF38BQ5VTL8 546 aaKnown RBP9.82□□□□□ -0.84
CLK3-226ENST00000569406 C2orf16Q68DN1 1984 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 ASCC3Q8N3C0 2202 aaKnown RBP9.82□□□□□ -0.84
CLK3-226ENST00000569406 APIPQ96GX9 242 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 PHB2Q99623 299 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 PARP12Q9H0J9 701 aaKnown RBP9.82□□□□□ -0.84
CLK3-226ENST00000569406 MSL2Q9HCI7 577 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 LPAR3Q9UBY5 353 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 ICKQ9UPZ9 632 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 NUP210Q8TEM1 1887 aaPredicted RBP9.82□□□□□ -0.84
CLK3-226ENST00000569406 ANXA4P09525 319 aaPredicted RBP9.82□□□□□ -0.84
CLK3-226ENST00000569406 SDC1P18827 310 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 MAPK8P45983 427 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 LBX1P52954 281 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 HENMT1Q5T8I9 393 aaKnown RBP9.82□□□□□ -0.84
CLK3-226ENST00000569406 CPTPQ5TA50 214 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 NDUFAF7Q7L592 441 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.82□□□□□ -0.84
CLK3-226ENST00000569406 ADCK2Q7Z695 626 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 WFDC8Q8IUA0 241 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 BOD1Q96IK1 185 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 GPR87Q9BY21 358 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 ACTRT3Q9BYD9 372 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 SLC32A1Q9H598 525 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 CAMK2AQ9UQM7 478 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 ZNF337Q9Y3M9 751 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 PLXND1Q9Y4D7 1925 aa9.82□□□□□ -0.84
CLK3-226ENST00000569406 CCL16O15467 120 aa9.81□□□□□ -0.84
CLK3-226ENST00000569406 NDUFB6O95139 128 aa9.81□□□□□ -0.84
CLK3-226ENST00000569406 GIMD1P0DJR0 217 aa9.81□□□□□ -0.84
CLK3-226ENST00000569406 OR12D1P0DN82 309 aa9.81□□□□□ -0.84
CLK3-226ENST00000569406 COMPP49747 757 aaPredicted RBP9.81□□□□□ -0.84
CLK3-226ENST00000569406 CEBPGP53567 150 aa9.81□□□□□ -0.84
CLK3-226ENST00000569406 DVL1P1P54792 670 aaPredicted RBP9.81□□□□□ -0.84
CLK3-226ENST00000569406 RAP1BP61224 184 aa9.81□□□□□ -0.84
CLK3-226ENST00000569406 SLC22A6Q4U2R8 563 aa9.81□□□□□ -0.84
CLK3-226ENST00000569406 NUFIP2Q7Z417 695 aaKnown RBP9.81□□□□□ -0.84
CLK3-226ENST00000569406 TSEN54Q7Z6J9 526 aaKnown RBP9.81□□□□□ -0.84
CLK3-226ENST00000569406 MRPL41Q8IXM3 137 aaKnown RBP9.81□□□□□ -0.84
CLK3-226ENST00000569406 CSGALNACT1Q8TDX6 532 aa9.81□□□□□ -0.84
CLK3-226ENST00000569406 SPRYD4Q8WW59 207 aaPredicted RBP9.81□□□□□ -0.84
CLK3-226ENST00000569406 FRZBQ92765 325 aa9.81□□□□□ -0.84
CLK3-226ENST00000569406 ACTR3CQ9C0K3 210 aaPredicted RBP9.81□□□□□ -0.84
CLK3-226ENST00000569406 UPB1Q9UBR1 384 aa9.81□□□□□ -0.84
CLK3-226ENST00000569406 RNF150Q9ULK6 438 aa9.81□□□□□ -0.84
CLK3-226ENST00000569406 AMDHD2Q9Y303 409 aa9.81□□□□□ -0.84
CLK3-226ENST00000569406 KIF26AQ9ULI4 1882 aaPredicted RBP9.81□□□□□ -0.84
CLK3-226ENST00000569406 TSPAN11A1L157 253 aa9.81□□□□□ -0.84
CLK3-226ENST00000569406 F6UZH7 168 aa9.81□□□□□ -0.84
CLK3-226ENST00000569406 FBXO24O75426 580 aa9.81□□□□□ -0.84
CLK3-226ENST00000569406 SLCO2B1O94956 709 aa9.81□□□□□ -0.84
CLK3-226ENST00000569406 ETHE1O95571 254 aa9.81□□□□□ -0.84
CLK3-226ENST00000569406 CXCL1P09341 107 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 227.4 ms