RNA–Protein interactions for RNA: ENST00000569151.1

BBS4-216, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 272 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-216	ENST00000569151	PFDN5	Q99471	154 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	SULT4A1	Q9BR01	284 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	PBDC1	Q9BVG4	233 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	GGACT	Q9BVM4	153 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	SSBP4	Q9BWG4	385 aa	Predicted RBP	4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	SLC25A18	Q9H1K4	315 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	ATG5	Q9H1Y0	275 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	HIPK2	Q9H2X6	1198 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	GSX1	Q9H4S2	264 aa	Predicted RBP	4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	C7orf69	Q9H7B7	122 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	MRPS30	Q9NP92	439 aa	Known RBP	4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	PRDM7	Q9NQW5	492 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	RXFP3	Q9NSD7	469 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	C20orf141	Q9NUB4	165 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	USP36	Q9P275	1121 aa	Known RBP	4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	C5AR2	Q9P296	337 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	CKLF	Q9UBR5	152 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	SUSD2	Q9UGT4	822 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	IL36A	Q9UHA7	158 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	DPP7	Q9UHL4	492 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	CD84	Q9UIB8	345 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	C19orf53	Q9UNZ5	99 aa	Predicted RBP	4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	TP53TG5	Q9Y2B4	290 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	RPH3A	Q9Y2J0	694 aa	Predicted RBP	4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	STRAP	Q9Y3F4	350 aa	Known RBP	4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	ADAM18	Q9Y3Q7	739 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	OR10H1	Q9Y4A9	318 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	HELZ	P42694	1942 aa	Known RBP	4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	MDC1	Q14676	2089 aa	Known RBP	4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	TRAV18	A0A075B6X5	111 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	TRAV27	A0A087WT01	109 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151		A0A1B0GWA3	101 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151		A0A1B0GWJ7	208 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	CPED1	A4D0V7	1026 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	MYADML2	A6NDP7	307 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	BTBD17	A6NE02	478 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	URAD	A6NGE7	173 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	OR52A4P	A6NMU1	304 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	TSTD3	H0UI37	97 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	SLC31A2	O15432	143 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	ERI3	O43414	337 aa	Known RBP	4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	SYT7	O43581	403 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	OR1F1	O43749	312 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	LEFTY1	O75610	366 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	ERAL1	O75616	437 aa	Known RBP	4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	STK17B	O94768	372 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	FGF19	O95750	216 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	LRG1	P02750	347 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	CSTB	P04080	98 aa	Known RBP	4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	PRNP	P04156	253 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	DCN	P07585	359 aa	Known RBP	4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	ITGA5	P08648	1049 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	SPARC	P09486	303 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	SEC11B	P0C7V7	166 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	CLU	P10909	449 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	IGFBP3	P17936	291 aa	Predicted RBP	4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	S1PR1	P21453	382 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	FCAR	P24071	287 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	ACKR3	P25106	362 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	LMO1	P25800	156 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	GABRR2	P28476	465 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	PBLD	P30039	288 aa	Predicted RBP	4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	AVPR2	P30518	371 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	RAB28	P51157	221 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	NANOS3	P60323	173 aa	Known RBP	4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	PKIA	P61925	76 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	IL13RA1	P78552	427 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	HSD11B2	P80365	405 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	TLE2	Q04725	743 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	BIK	Q13323	160 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	PPP1R1A	Q13522	171 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	TSTA3	Q13630	321 aa	Predicted RBP	4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	NR0B2	Q15466	257 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	SURF2	Q15527	256 aa	Predicted RBP	4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	TAF13	Q15543	124 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	AWAT1	Q58HT5	328 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	TMEM128	Q5BJH2	165 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	ACER2	Q5QJU3	275 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	C1orf100	Q5SVJ3	147 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	FHL5	Q5TD97	284 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	METRNL	Q641Q3	311 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	ZNF585A	Q6P3V2	769 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	ULK3	Q6PHR2	472 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	DHRS11	Q6UWP2	260 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	CXCL17	Q6UXB2	119 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	ERN2	Q76MJ5	926 aa	Known RBP	4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	C11orf96	Q7Z7L8	435 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	PEG10	Q86TG7	708 aa	Known RBP	4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	RTN4RL1	Q86UN2	441 aa	Predicted RBP	4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	ZNF547	Q8IVP9	402 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	RFLNB	Q8N5W9	214 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	EXD3	Q8N9H8	876 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	CYB561A3	Q8NBI2	242 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	UBAC2	Q8NBM4	344 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	MFSD9	Q8NBP5	474 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	CHST14	Q8NCH0	376 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	SLC16A11	Q8NCK7	471 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	BEND2	Q8NDZ0	799 aa		4.14	□□□□□ -1.75
BBS4-216	ENST00000569151	OR4E2	Q8NGC2	313 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms