RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 NDEL1Q9GZM8 345 aa12.68□□□□□ -0.38
RNF40-209ENST00000566703 ANKRD19PQ9H560 264 aa12.68□□□□□ -0.38
RNF40-209ENST00000566703 GRHPRQ9UBQ7 328 aa12.68□□□□□ -0.38
RNF40-209ENST00000566703 OPN4Q9UHM6 478 aa12.68□□□□□ -0.38
RNF40-209ENST00000566703 PURGQ9UJV8 347 aaKnown RBP12.68□□□□□ -0.38
RNF40-209ENST00000566703 SVEP1Q4LDE5 3571 aa12.68□□□□□ -0.38
RNF40-209ENST00000566703 TRAV27A0A087WT01 109 aa12.67□□□□□ -0.38
RNF40-209ENST00000566703 ISPDA4D126 451 aa12.67□□□□□ -0.38
RNF40-209ENST00000566703 XKRYO14609 159 aa12.67□□□□□ -0.38
RNF40-209ENST00000566703 FFAR1O14842 300 aa12.67□□□□□ -0.38
RNF40-209ENST00000566703 SURF4O15260 269 aa12.67□□□□□ -0.38
RNF40-209ENST00000566703 IGHV2-70P01814 119 aa12.67□□□□□ -0.38
RNF40-209ENST00000566703 SBK2P0C263 348 aa12.67□□□□□ -0.38
RNF40-209ENST00000566703 H2AFXP16104 143 aaPredicted RBP12.67□□□□□ -0.38
RNF40-209ENST00000566703 CPT2P23786 658 aa12.67□□□□□ -0.38
RNF40-209ENST00000566703 YAP1P46937 504 aaKnown RBP12.67□□□□□ -0.38
RNF40-209ENST00000566703 TUSC1Q2TAM9 212 aa12.67□□□□□ -0.38
RNF40-209ENST00000566703 ZBED5Q49AG3 693 aa12.67□□□□□ -0.38
RNF40-209ENST00000566703 TMEM155Q4W5P6 130 aa12.67□□□□□ -0.38
RNF40-209ENST00000566703 IFI44LQ53G44 452 aa12.67□□□□□ -0.38
RNF40-209ENST00000566703 ZNF730Q6ZMV8 503 aa12.67□□□□□ -0.38
RNF40-209ENST00000566703 CBLL1Q75N03 491 aa12.67□□□□□ -0.38
RNF40-209ENST00000566703 RRM2BQ7LG56 351 aa12.67□□□□□ -0.38
RNF40-209ENST00000566703 LRRC28Q86X40 367 aaPredicted RBP12.67□□□□□ -0.38
RNF40-209ENST00000566703 SLC15A3Q8IY34 581 aa12.67□□□□□ -0.38
RNF40-209ENST00000566703 BPIFB2Q8N4F0 458 aa12.67□□□□□ -0.38
RNF40-209ENST00000566703 SPICQ8N5J4 248 aa12.67□□□□□ -0.38
RNF40-209ENST00000566703 ZNF283Q8N7M2 679 aa12.67□□□□□ -0.38
RNF40-209ENST00000566703 RP9Q8TA86 221 aaKnown RBP12.67□□□□□ -0.38
RNF40-209ENST00000566703 PTP4A1Q93096 173 aa12.67□□□□□ -0.38
RNF40-209ENST00000566703 POP5Q969H6 163 aaKnown RBP12.67□□□□□ -0.38
RNF40-209ENST00000566703 HAVCR1Q96D42 359 aa12.67□□□□□ -0.38
RNF40-209ENST00000566703 MSL2Q9HCI7 577 aa12.67□□□□□ -0.38
RNF40-209ENST00000566703 TMEM106BQ9NUM4 274 aa12.67□□□□□ -0.38
RNF40-209ENST00000566703 CMTM6Q9NX76 183 aa12.67□□□□□ -0.38
RNF40-209ENST00000566703 IL19Q9UHD0 177 aa12.67□□□□□ -0.38
RNF40-209ENST00000566703 SNX13Q9Y5W8 968 aa12.67□□□□□ -0.38
RNF40-209ENST00000566703 CAPN7Q9Y6W3 813 aa12.67□□□□□ -0.38
RNF40-209ENST00000566703 PRSS37A4D1T9 235 aa12.66□□□□□ -0.38
RNF40-209ENST00000566703 J3KTA2 159 aa12.66□□□□□ -0.38
RNF40-209ENST00000566703 J3QW42 95 aa12.66□□□□□ -0.38
RNF40-209ENST00000566703 IFNL4K9M1U5 179 aa12.66□□□□□ -0.38
RNF40-209ENST00000566703 SGCEO43556 437 aa12.66□□□□□ -0.38
RNF40-209ENST00000566703 RGS9O75916 674 aaPredicted RBP12.66□□□□□ -0.38
RNF40-209ENST00000566703 PRSS23O95084 383 aa12.66□□□□□ -0.38
RNF40-209ENST00000566703 SCG5P05408 212 aa12.66□□□□□ -0.38
RNF40-209ENST00000566703 FUT4P22083 530 aa12.66□□□□□ -0.38
RNF40-209ENST00000566703 RPL4P36578 427 aaKnown RBP12.66□□□□□ -0.38
RNF40-209ENST00000566703 LSM6P62312 80 aaKnown RBP12.66□□□□□ -0.38
RNF40-209ENST00000566703 LCN2P80188 198 aa12.66□□□□□ -0.38
RNF40-209ENST00000566703 FAM122BQ7Z309 247 aa12.66□□□□□ -0.38
RNF40-209ENST00000566703 VTCN1Q7Z7D3 282 aa12.66□□□□□ -0.38
RNF40-209ENST00000566703 KLHL36Q8N4N3 616 aa12.66□□□□□ -0.38
RNF40-209ENST00000566703 ZDHHC22Q8N966 263 aa12.66□□□□□ -0.38
RNF40-209ENST00000566703 OR13C2Q8NGS9 318 aa12.66□□□□□ -0.38
RNF40-209ENST00000566703 DVL3Q92997 716 aaPredicted RBP12.66□□□□□ -0.38
RNF40-209ENST00000566703 SLC6A7Q99884 636 aa12.66□□□□□ -0.38
RNF40-209ENST00000566703 HOPXQ9BPY8 73 aaPredicted RBP12.66□□□□□ -0.38
RNF40-209ENST00000566703 PATZ1Q9HBE1 687 aaKnown RBP12.66□□□□□ -0.38
RNF40-209ENST00000566703 DDX28Q9NUL7 540 aaKnown RBP12.66□□□□□ -0.38
RNF40-209ENST00000566703 FGFR1OP2Q9NVK5 253 aa12.66□□□□□ -0.38
RNF40-209ENST00000566703 UBAP1Q9NZ09 502 aa12.66□□□□□ -0.38
RNF40-209ENST00000566703 RHCGQ9UBD6 479 aa12.66□□□□□ -0.38
RNF40-209ENST00000566703 TMEM5Q9Y2B1 443 aa12.66□□□□□ -0.38
RNF40-209ENST00000566703 CXCR6O00574 342 aa12.65□□□□□ -0.38
RNF40-209ENST00000566703 NDUFAB1O14561 156 aa12.65□□□□□ -0.38
RNF40-209ENST00000566703 CDC42EP2O14613 210 aa12.65□□□□□ -0.38
RNF40-209ENST00000566703 SPRY1O43609 319 aaPredicted RBP12.65□□□□□ -0.38
RNF40-209ENST00000566703 DOK2O60496 412 aa12.65□□□□□ -0.38
RNF40-209ENST00000566703 PTP4A3O75365 173 aa12.65□□□□□ -0.38
RNF40-209ENST00000566703 ZFP36P26651 326 aaKnown RBP12.65□□□□□ -0.38
RNF40-209ENST00000566703 HTR5AP47898 357 aa12.65□□□□□ -0.38
RNF40-209ENST00000566703 SLC6A9P48067 706 aa12.65□□□□□ -0.38
RNF40-209ENST00000566703 LIPEQ05469 1076 aa12.65□□□□□ -0.38
RNF40-209ENST00000566703 AQP6Q13520 282 aa12.65□□□□□ -0.38
RNF40-209ENST00000566703 SPRNQ5BIV9 151 aa12.65□□□□□ -0.38
RNF40-209ENST00000566703 GPR139Q6DWJ6 353 aa12.65□□□□□ -0.38
RNF40-209ENST00000566703 CGB2Q6NT52 195 aa12.65□□□□□ -0.38
RNF40-209ENST00000566703 SLC27A4Q6P1M0 643 aa12.65□□□□□ -0.38
RNF40-209ENST00000566703 FKBP9P1Q75LS8 142 aa12.65□□□□□ -0.38
RNF40-209ENST00000566703 VASH1Q7L8A9 365 aaPredicted RBP12.65□□□□□ -0.38
RNF40-209ENST00000566703 CYP4Z1Q86W10 505 aa12.65□□□□□ -0.38
RNF40-209ENST00000566703 RCN3Q96D15 328 aa12.65□□□□□ -0.38
RNF40-209ENST00000566703 CMBLQ96DG6 245 aa12.65□□□□□ -0.38
RNF40-209ENST00000566703 Q96M85 177 aa12.65□□□□□ -0.38
RNF40-209ENST00000566703 DCLRE1CQ96SD1 692 aaKnown RBP12.65□□□□□ -0.38
RNF40-209ENST00000566703 GPA33Q99795 319 aa12.65□□□□□ -0.38
RNF40-209ENST00000566703 NMNAT1Q9HAN9 279 aaPredicted RBP12.65□□□□□ -0.38
RNF40-209ENST00000566703 EMC7Q9NPA0 242 aa12.65□□□□□ -0.38
RNF40-209ENST00000566703 ATPIF1Q9UII2 106 aa12.65□□□□□ -0.38
RNF40-209ENST00000566703 STARD10Q9Y365 291 aa12.65□□□□□ -0.38
RNF40-209ENST00000566703 TEX13CA0A0J9YWL9 993 aa12.64□□□□□ -0.39
RNF40-209ENST00000566703 A8MXK9 166 aa12.64□□□□□ -0.39
RNF40-209ENST00000566703 GSTA4O15217 222 aa12.64□□□□□ -0.39
RNF40-209ENST00000566703 KHDRBS3O75525 346 aaKnown RBP12.64□□□□□ -0.39
RNF40-209ENST00000566703 ZNF682O95780 498 aa12.64□□□□□ -0.39
RNF40-209ENST00000566703 RAC2P15153 192 aa12.64□□□□□ -0.39
RNF40-209ENST00000566703 EGR1P18146 543 aa12.64□□□□□ -0.39
RNF40-209ENST00000566703 UBA52P62987 128 aaKnown RBP12.64□□□□□ -0.39
RNF40-209ENST00000566703 MESTQ5EB52 335 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms