RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 MICAQ29983 383 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 C5orf64Q2M2E5 130 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 TPTE2P1Q5T6R2 138 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 MFSD14CQ5VZR4 134 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 APOBEC3HQ6NTF7 200 aaKnown RBP2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 UFSP1Q6NVU6 142 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 PPP1R2P3Q6NXS1 205 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 C8orf74Q6P047 294 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 GDPGP1Q6ZNW5 385 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 C1QL2Q7Z5L3 287 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 HORMAD1Q86X24 394 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 SLC22A18ASQ8N1D0 253 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 ARRDC1Q8N5I2 433 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 ZFP41Q8N8Y5 198 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 NECAP1Q8NC96 275 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 UBA3Q8TBC4 463 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 PHF10Q8WUB8 498 aaKnown RBP2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 LGMNQ99538 433 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 KCTD14Q9BQ13 255 aaPredicted RBP2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 API5Q9BZZ5 524 aaKnown RBP2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 ING2Q9H160 280 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 TMBIM4Q9HC24 238 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 IMP3Q9NV31 184 aaKnown RBP2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 NAGKQ9UJ70 344 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 FADS3Q9Y5Q0 445 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 V9GY05 133 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 COL3A1P02461 1466 aaPredicted RBP2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 ARHGAP23Q9P227 1491 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 CFAP74Q9C0B2 1584 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 DOCK7Q96N67 2140 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 SIGLEC1Q9BZZ2 1709 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 KDM5DQ9BY66 1539 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 UACAQ9BZF9 1416 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 CNTLNQ9NXG0 1405 aa2.68□□□□□ -1.98
HERPUD1-211ENST00000566550 MROH2AA6NES4 1674 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 ADGBQ8N7X0 1667 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 IGHV1OR21-1A0A087WYE8 117 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 TMEM210A6NLX4 147 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 GOLGA8JA6NMD2 632 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 ERI2A8K979 691 aaKnown RBP2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 ZNF487B1APH4 448 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 GOLGA8KD6RF30 607 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 H0YHG0 523 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 SMKR1H3BMG3 65 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 GOLGA8MH3BSY2 632 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 K7EMT4 169 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 DFFAO00273 331 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 NUPL2O15504 423 aaKnown RBP2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 EMC8O43402 210 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 RAD51CO43502 376 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 DPM1O60762 260 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 EIF3GO75821 320 aaKnown RBP eCLIP2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 ZMPSTE24O75844 475 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 DEXIO95424 95 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 BMP15O95972 392 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 RENP00797 406 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 OXTP01178 125 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 OR8U8P0C7N1 319 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 GOLGA8HP0CJ92 632 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 CT45A10P0DMU9 189 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 LIPCP11150 499 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 GGT1P19440 569 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 TBPP20226 339 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 IL2RGP31785 369 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 DNASE1L1P49184 302 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 KLK7P49862 253 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 HNRNPA3P51991 378 aaKnown RBP2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 PLK1P53350 603 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 ERVPABLB-1P60509 514 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 TSPAN5P62079 268 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 SELENOTP62341 195 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 RPL31P62899 125 aaKnown RBP2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 BCL2L1Q07817 233 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 TWF1Q12792 350 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 STX5Q13190 355 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 ZNHIT3Q15649 155 aaPredicted RBP2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 CCL14Q16627 93 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 PGGHGQ32M88 737 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 ACTL10Q5JWF8 245 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 SAPCD1Q5SSQ6 148 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 COX15Q7KZN9 410 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 TMEM150AQ86TG1 271 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 C9orf40Q8IXQ3 194 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 LRRC34Q8IZ02 419 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 RDH10Q8IZV5 341 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 MDS2Q8NDY4 140 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 BEST4Q8NFU0 473 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 FANK1Q8TC84 345 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 MRAPQ8TCY5 172 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 RNASEH2CQ8TDP1 164 aaKnown RBP2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 MRGPRDQ8TDS7 321 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 SDR42E1Q8WUS8 393 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 APH1BQ8WW43 257 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 RASL10AQ92737 203 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 ARPC1AQ92747 370 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 CCDC127Q96BQ5 260 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 GMPPAQ96IJ6 420 aaPredicted RBP2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 ADTRPQ96IZ2 230 aa2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 DNAJC1Q96KC8 554 aaKnown RBP2.67□□□□□ -1.98
HERPUD1-211ENST00000566550 COL21A1Q96P44 957 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms