RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 C11orf71Q6IPW1 123 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 HIST2H3AQ71DI3 136 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 OR9Q1Q8NGQ5 310 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 AKR7LQ8NHP1 331 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 GABARAPL3Q9BY60 117 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 GSX2Q9BZM3 304 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 MRPL22Q9NWU5 206 aaKnown RBP18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 USE1Q9NZ43 259 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 NDRG4Q9ULP0 352 aaKnown RBP18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 ZAR1LA6NP61 321 aa18.19■□□□□ 0.5
SHCBP1-205ENST00000566016 DOK2O60496 412 aa18.19■□□□□ 0.5
SHCBP1-205ENST00000566016 MITFO75030 526 aaPredicted RBP18.19■□□□□ 0.5
SHCBP1-205ENST00000566016 GPANK1O95872 356 aa18.19■□□□□ 0.5
SHCBP1-205ENST00000566016 ALPLP05186 524 aa18.19■□□□□ 0.5
SHCBP1-205ENST00000566016 PYCR1P32322 319 aa18.19■□□□□ 0.5
SHCBP1-205ENST00000566016 GLRXP35754 106 aa18.19■□□□□ 0.5
SHCBP1-205ENST00000566016 GGT2P36268 569 aa18.19■□□□□ 0.5
SHCBP1-205ENST00000566016 TESK1Q15569 626 aa18.19■□□□□ 0.5
SHCBP1-205ENST00000566016 EFNB3Q15768 340 aa18.19■□□□□ 0.5
SHCBP1-205ENST00000566016 ADIPOQQ15848 244 aa18.19■□□□□ 0.5
SHCBP1-205ENST00000566016 MEP1BQ16820 701 aa18.19■□□□□ 0.5
SHCBP1-205ENST00000566016 KRT80Q6KB66 452 aa18.19■□□□□ 0.5
SHCBP1-205ENST00000566016 ZNF774Q6NX45 483 aa18.19■□□□□ 0.5
SHCBP1-205ENST00000566016 VASH1Q7L8A9 365 aaPredicted RBP18.19■□□□□ 0.5
SHCBP1-205ENST00000566016 PAQR4Q8N4S7 273 aaPredicted RBP18.19■□□□□ 0.5
SHCBP1-205ENST00000566016 GJC3Q8NFK1 279 aa18.19■□□□□ 0.5
SHCBP1-205ENST00000566016 OR10H5Q8NGA6 315 aa18.19■□□□□ 0.5
SHCBP1-205ENST00000566016 CYB5R1Q9UHQ9 305 aa18.19■□□□□ 0.5
SHCBP1-205ENST00000566016 LOC100509620A0A075B734 347 aa18.18■□□□□ 0.5
SHCBP1-205ENST00000566016 FAM171A2A8MVW0 826 aa18.18■□□□□ 0.5
SHCBP1-205ENST00000566016 VSTM5A8MXK1 200 aa18.18■□□□□ 0.5
SHCBP1-205ENST00000566016 PRR23D1E9PI22 279 aaPredicted RBP18.18■□□□□ 0.5
SHCBP1-205ENST00000566016 SMPD2O60906 423 aa18.18■□□□□ 0.5
SHCBP1-205ENST00000566016 HLA-DQA2P01906 255 aa18.18■□□□□ 0.5
SHCBP1-205ENST00000566016 PRR23D2P0DMB1 279 aaPredicted RBP18.18■□□□□ 0.5
SHCBP1-205ENST00000566016 FMO3P31513 532 aa18.18■□□□□ 0.5
SHCBP1-205ENST00000566016 SERPINF1P36955 418 aa18.18■□□□□ 0.5
SHCBP1-205ENST00000566016 GDI2P50395 445 aaKnown RBP18.18■□□□□ 0.5
SHCBP1-205ENST00000566016 ART1P52961 327 aa18.18■□□□□ 0.5
SHCBP1-205ENST00000566016 DBPQ10586 325 aaPredicted RBP18.18■□□□□ 0.5
SHCBP1-205ENST00000566016 RAB35Q15286 201 aa18.18■□□□□ 0.5
SHCBP1-205ENST00000566016 SLX4IPQ5VYV7 408 aa18.18■□□□□ 0.5
SHCBP1-205ENST00000566016 TMEM236Q5W0B7 351 aa18.18■□□□□ 0.5
SHCBP1-205ENST00000566016 PTP4A1Q93096 173 aa18.18■□□□□ 0.5
SHCBP1-205ENST00000566016 PLEKHA8Q96JA3 519 aa18.18■□□□□ 0.5
SHCBP1-205ENST00000566016 HDHD2Q9H0R4 259 aa18.18■□□□□ 0.5
SHCBP1-205ENST00000566016 PLEK2Q9NYT0 353 aa18.18■□□□□ 0.5
SHCBP1-205ENST00000566016 FBXO9Q9UK97 447 aaPredicted RBP18.18■□□□□ 0.5
SHCBP1-205ENST00000566016 COMMD3-BMI1R4GMX3 469 aa18.18■□□□□ 0.5
SHCBP1-205ENST00000566016 FLNAP21333 2647 aaKnown RBP18.18■□□□□ 0.5
SHCBP1-205ENST00000566016 OR6C6A6NF89 314 aa18.17■□□□□ 0.5
SHCBP1-205ENST00000566016 FAM183AA6NL82 134 aa18.17■□□□□ 0.5
SHCBP1-205ENST00000566016 PRODHO43272 600 aa18.17■□□□□ 0.5
SHCBP1-205ENST00000566016 SYNGR3O43761 229 aa18.17■□□□□ 0.5
SHCBP1-205ENST00000566016 GYPBP06028 91 aa18.17■□□□□ 0.5
SHCBP1-205ENST00000566016 CLUP10909 449 aa18.17■□□□□ 0.5
SHCBP1-205ENST00000566016 BMP4P12644 408 aa18.17■□□□□ 0.5
SHCBP1-205ENST00000566016 THBS4P35443 961 aa18.17■□□□□ 0.5
SHCBP1-205ENST00000566016 PCK2Q16822 640 aa18.17■□□□□ 0.5
SHCBP1-205ENST00000566016 LINC01590Q5TEZ4 76 aa18.17■□□□□ 0.5
SHCBP1-205ENST00000566016 SLC18B1Q6NT16 456 aa18.17■□□□□ 0.5
SHCBP1-205ENST00000566016 UNQ6126/PRO20091Q6UXV3 157 aa18.17■□□□□ 0.5
SHCBP1-205ENST00000566016 C1orf174Q8IYL3 243 aa18.17■□□□□ 0.5
SHCBP1-205ENST00000566016 ZNRF4Q8WWF5 429 aa18.17■□□□□ 0.5
SHCBP1-205ENST00000566016 HCAR1Q9BXC0 346 aa18.17■□□□□ 0.5
SHCBP1-205ENST00000566016 BCL2L14Q9BZR8 327 aa18.17■□□□□ 0.5
SHCBP1-205ENST00000566016 C5orf49A4QMS7 147 aa18.16■□□□□ 0.5
SHCBP1-205ENST00000566016 B9A039 149 aa18.16■□□□□ 0.5
SHCBP1-205ENST00000566016 EI24O14681 340 aa18.16■□□□□ 0.5
SHCBP1-205ENST00000566016 RER1O15258 196 aa18.16■□□□□ 0.5
SHCBP1-205ENST00000566016 OR4A8P0C604 315 aa18.16■□□□□ 0.5
SHCBP1-205ENST00000566016 CCL2P13500 99 aa18.16■□□□□ 0.5
SHCBP1-205ENST00000566016 ZNF823P16415 610 aa18.16■□□□□ 0.5
SHCBP1-205ENST00000566016 EPHA2P29317 976 aa18.16■□□□□ 0.5
SHCBP1-205ENST00000566016 RAD52P43351 418 aa18.16■□□□□ 0.5
SHCBP1-205ENST00000566016 HTR5AP47898 357 aa18.16■□□□□ 0.5
SHCBP1-205ENST00000566016 ALDH3A2P51648 485 aa18.16■□□□□ 0.5
SHCBP1-205ENST00000566016 SWI5Q1ZZU3 235 aa18.16■□□□□ 0.5
SHCBP1-205ENST00000566016 TEX30Q5JUR7 227 aa18.16■□□□□ 0.5
SHCBP1-205ENST00000566016 OTPQ5XKR4 325 aa18.16■□□□□ 0.5
SHCBP1-205ENST00000566016 OR51L1Q8NGJ5 315 aa18.16■□□□□ 0.5
SHCBP1-205ENST00000566016 OR6K6Q8NGW6 343 aa18.16■□□□□ 0.5
SHCBP1-205ENST00000566016 IPCEF1Q8WWN9 437 aaPredicted RBP18.16■□□□□ 0.5
SHCBP1-205ENST00000566016 C9orf16Q9BUW7 83 aa18.16■□□□□ 0.5
SHCBP1-205ENST00000566016 HINT3Q9NQE9 182 aaKnown RBP18.16■□□□□ 0.5
SHCBP1-205ENST00000566016 H7C417 338 aa18.15■□□□□ 0.5
SHCBP1-205ENST00000566016 GLCEO94923 617 aa18.15■□□□□ 0.5
SHCBP1-205ENST00000566016 PTH2RP49190 550 aa18.15■□□□□ 0.5
SHCBP1-205ENST00000566016 EVX1P49640 407 aa18.15■□□□□ 0.5
SHCBP1-205ENST00000566016 UCP2P55851 309 aa18.15■□□□□ 0.5
SHCBP1-205ENST00000566016 ADAM8P78325 824 aa18.15■□□□□ 0.5
SHCBP1-205ENST00000566016 SNAPC1Q16533 368 aa18.15■□□□□ 0.5
SHCBP1-205ENST00000566016 MST1LQ2TV78 715 aa18.15■□□□□ 0.5
SHCBP1-205ENST00000566016 CCDC92Q53HC0 331 aaPredicted RBP18.15■□□□□ 0.5
SHCBP1-205ENST00000566016 C12orf73Q69YU5 71 aa18.15■□□□□ 0.5
SHCBP1-205ENST00000566016 PLBD1Q6P4A8 553 aa18.15■□□□□ 0.5
SHCBP1-205ENST00000566016 VHLLQ6RSH7 139 aa18.15■□□□□ 0.5
SHCBP1-205ENST00000566016 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.15■□□□□ 0.5
SHCBP1-205ENST00000566016 MRPL24Q96A35 216 aaKnown RBP18.15■□□□□ 0.5
SHCBP1-205ENST00000566016 COQ7Q99807 217 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms