RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 CMAHPQ9Y471 501 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 TIMM10BQ9Y5J6 103 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 MTORP42345 2549 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 TMEM129A0AVI4 362 aa11.92□□□□□ -0.5
HERPUD1-210ENST00000565966 TRIM64A6NGJ6 449 aa11.92□□□□□ -0.5
HERPUD1-210ENST00000565966 TRIM64BA6NI03 449 aa11.92□□□□□ -0.5
HERPUD1-210ENST00000565966 FAM171A2A8MVW0 826 aa11.92□□□□□ -0.5
HERPUD1-210ENST00000565966 H7C1Q1 480 aa11.92□□□□□ -0.5
HERPUD1-210ENST00000565966 SSX4O60224 188 aa11.92□□□□□ -0.5
HERPUD1-210ENST00000565966 INHBBP09529 407 aa11.92□□□□□ -0.5
HERPUD1-210ENST00000565966 CCL2P13500 99 aa11.92□□□□□ -0.5
HERPUD1-210ENST00000565966 APEX1P27695 318 aaKnown RBP11.92□□□□□ -0.5
HERPUD1-210ENST00000565966 APLNRP35414 380 aa11.92□□□□□ -0.5
HERPUD1-210ENST00000565966 NUDT6P53370 316 aa11.92□□□□□ -0.5
HERPUD1-210ENST00000565966 RPS23P62266 143 aaKnown RBP11.92□□□□□ -0.5
HERPUD1-210ENST00000565966 CDK5Q00535 292 aa11.92□□□□□ -0.5
HERPUD1-210ENST00000565966 GINS1Q14691 196 aa11.92□□□□□ -0.5
HERPUD1-210ENST00000565966 SLC27A4Q6P1M0 643 aa11.92□□□□□ -0.5
HERPUD1-210ENST00000565966 C10orf67Q8IYJ2 551 aa11.92□□□□□ -0.5
HERPUD1-210ENST00000565966 ALDH16A1Q8IZ83 802 aa11.92□□□□□ -0.5
HERPUD1-210ENST00000565966 PARP8Q8N3A8 854 aa11.92□□□□□ -0.5
HERPUD1-210ENST00000565966 CPEB3Q8NE35 698 aaKnown RBP11.92□□□□□ -0.5
HERPUD1-210ENST00000565966 SLC26A10Q8NG04 563 aa11.92□□□□□ -0.5
HERPUD1-210ENST00000565966 ZNRF4Q8WWF5 429 aa11.92□□□□□ -0.5
HERPUD1-210ENST00000565966 DOK1Q99704 481 aa11.92□□□□□ -0.5
HERPUD1-210ENST00000565966 RBM4Q9BWF3 364 aaKnown RBP11.92□□□□□ -0.5
HERPUD1-210ENST00000565966 NMNAT2Q9BZQ4 307 aa11.92□□□□□ -0.5
HERPUD1-210ENST00000565966 SLC25A19Q9HC21 320 aa11.92□□□□□ -0.5
HERPUD1-210ENST00000565966 OAZ3Q9UMX2 235 aa11.92□□□□□ -0.5
HERPUD1-210ENST00000565966 RIIAD1A6NNX1 92 aa11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 MITFO75030 526 aaPredicted RBP11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 SNAP29O95721 258 aa11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 F12P00748 615 aaPredicted RBP11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 IFNGP01579 166 aa11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 TFP02787 698 aa11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 STOMP27105 288 aa11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 PYCR1P32322 319 aa11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 EVX1P49640 407 aa11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 EFNA4P52798 201 aa11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 CRISP1P54107 249 aa11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 GLO1Q04760 184 aa11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 TNK1Q13470 666 aa11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 AQP6Q13520 282 aa11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 ZSCAN26Q16670 478 aa11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 MEP1BQ16820 701 aa11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 TMEM236Q5W0B7 351 aa11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 KDM4DQ6B0I6 523 aa11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 ZNF774Q6NX45 483 aa11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 DNM1P46Q6ZS02 220 aa11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 BIVMQ86UB2 503 aa11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 CIARTQ8N365 385 aaPredicted RBP11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 PAQR4Q8N4S7 273 aaPredicted RBP11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 ICA1LQ8NDH6 482 aa11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 OR9Q1Q8NGQ5 310 aa11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 OR2T4Q8NH00 348 aa11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 MRPL24Q96A35 216 aaKnown RBP11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 COX4I2Q96KJ9 171 aa11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 POM121L2Q96KW2 1035 aa11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 VRK1Q99986 396 aaPredicted RBP11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 S100A14Q9HCY8 104 aa11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 KRT84Q9NSB2 600 aa11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 CSPG4Q6UVK1 2322 aa11.91□□□□□ -0.5
HERPUD1-210ENST00000565966 LOC100509620A0A075B734 347 aa11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 SAC3D1A6NKF1 404 aa11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 GPRIN2O60269 458 aa11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 CLUP10909 449 aa11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 SPI1P17947 270 aa11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 CCNOP22674 350 aa11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 PCSK6P29122 969 aa11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 RAD52P43351 418 aa11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 PPOXP50336 477 aa11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 SLC25A1P53007 311 aa11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 UCP2P55851 309 aa11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 DSCR9P59020 149 aa11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 ESRRGP62508 458 aa11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 TEKQ02763 1124 aa11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 SCRN3Q0VDG4 424 aa11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 RGS7BPQ6MZT1 257 aaPredicted RBP11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 PROKR2Q8NFJ6 384 aa11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 OR51L1Q8NGJ5 315 aa11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 RHNO1Q9BSD3 238 aa11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 HCAR1Q9BXC0 346 aa11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 MRPL37Q9BZE1 423 aaKnown RBP11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 BCL2L14Q9BZR8 327 aa11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 RAB1BQ9H0U4 201 aa11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 MRPL22Q9NWU5 206 aaKnown RBP11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 ASH2LQ9UBL3 628 aa11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 TMEFF2Q9UIK5 374 aaPredicted RBP11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 LHFPL6Q9Y693 200 aa11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 ABCA1O95477 2261 aa11.9□□□□□ -0.5
HERPUD1-210ENST00000565966 TVP23AA6NH52 213 aa11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 FAM183AA6NL82 134 aa11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 SMAD7O15105 426 aaKnown RBP11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 SURF4O15260 269 aa11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 SGCEO43556 437 aa11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 DOK2O60496 412 aa11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 HMGN1P05114 100 aa11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 GYPBP06028 91 aa11.89□□□□□ -0.51
HERPUD1-210ENST00000565966 FAM157BP0CG42 384 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms