RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 SSX1Q16384 188 aa16.48■□□□□ 0.23
COMMD4-213ENST00000565834 C9orf135Q5VTT2 229 aa16.48■□□□□ 0.23
COMMD4-213ENST00000565834 VWA1Q6PCB0 445 aa16.48■□□□□ 0.23
COMMD4-213ENST00000565834 LRRN1Q6UXK5 716 aa16.48■□□□□ 0.23
COMMD4-213ENST00000565834 ZNF813Q6ZN06 617 aa16.48■□□□□ 0.23
COMMD4-213ENST00000565834 SPATC1Q76KD6 591 aa16.48■□□□□ 0.23
COMMD4-213ENST00000565834 ATCAYQ86WG3 371 aa16.48■□□□□ 0.23
COMMD4-213ENST00000565834 ZNF679Q8IYX0 411 aa16.48■□□□□ 0.23
COMMD4-213ENST00000565834 MAP6Q96JE9 813 aa16.48■□□□□ 0.23
COMMD4-213ENST00000565834 EPG5Q9HCE0 2579 aa16.48■□□□□ 0.23
COMMD4-213ENST00000565834 E9PI62 339 aa16.47■□□□□ 0.23
COMMD4-213ENST00000565834 FARS2O95363 451 aaKnown RBP16.47■□□□□ 0.23
COMMD4-213ENST00000565834 ABHD16AO95870 558 aa16.47■□□□□ 0.23
COMMD4-213ENST00000565834 WNT11O96014 354 aa16.47■□□□□ 0.23
COMMD4-213ENST00000565834 AQP6Q13520 282 aa16.47■□□□□ 0.23
COMMD4-213ENST00000565834 ST3GAL2Q16842 350 aa16.47■□□□□ 0.23
COMMD4-213ENST00000565834 NRN1LQ496H8 165 aa16.47■□□□□ 0.23
COMMD4-213ENST00000565834 CFAP77Q6ZQR2 320 aa16.47■□□□□ 0.23
COMMD4-213ENST00000565834 P2RY8Q86VZ1 359 aa16.47■□□□□ 0.23
COMMD4-213ENST00000565834 PHC2Q8IXK0 858 aa16.47■□□□□ 0.23
COMMD4-213ENST00000565834 SLC22A24Q8N4F4 322 aa16.47■□□□□ 0.23
COMMD4-213ENST00000565834 SLAMF6Q96DU3 332 aa16.47■□□□□ 0.23
COMMD4-213ENST00000565834 ELOVL3Q9HB03 270 aa16.47■□□□□ 0.23
COMMD4-213ENST00000565834 NDUFB11Q9NX14 153 aa16.47■□□□□ 0.23
COMMD4-213ENST00000565834 TINAGQ9UJW2 476 aa16.47■□□□□ 0.23
COMMD4-213ENST00000565834 HSPB2A8KAH6 182 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 NOL3O60936 208 aaKnown RBP16.46■□□□□ 0.23
COMMD4-213ENST00000565834 TNFSF13O75888 250 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 CST2P09228 141 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 GLI4P10075 376 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 CELP19835 753 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 MPGP29372 298 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 MRPL28Q13084 256 aaKnown RBP16.46■□□□□ 0.23
COMMD4-213ENST00000565834 HSPB2Q16082 182 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 LIPNQ5VXI9 398 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 KLHL24Q6TFL4 600 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 ANKRD13BQ86YJ7 626 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 ZNF420Q8TAQ5 688 aaPredicted RBP16.46■□□□□ 0.23
COMMD4-213ENST00000565834 HAVCR2Q8TDQ0 301 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 RNF133Q8WVZ7 376 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 DGCR14Q96DF8 476 aaKnown RBP16.46■□□□□ 0.23
COMMD4-213ENST00000565834 SH3GL3Q99963 347 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 NAA50Q9GZZ1 169 aaKnown RBP16.46■□□□□ 0.23
COMMD4-213ENST00000565834 CENPMQ9NSP4 180 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 ENPP5Q9UJA9 477 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 GRIP1Q9Y3R0 1128 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 RER1O15258 196 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 RPP14O95059 124 aaKnown RBP16.46■□□□□ 0.23
COMMD4-213ENST00000565834 CNOT4O95628 575 aaKnown RBP16.46■□□□□ 0.23
COMMD4-213ENST00000565834 CEACAM8P31997 349 aaPredicted RBP16.46■□□□□ 0.23
COMMD4-213ENST00000565834 PSMB10P40306 273 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 RIDAP52758 137 aaKnown RBP16.46■□□□□ 0.23
COMMD4-213ENST00000565834 TMBIM6P55061 237 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 FOXG1P55316 489 aaPredicted RBP16.46■□□□□ 0.23
COMMD4-213ENST00000565834 SH3BGRP55822 239 aaPredicted RBP16.46■□□□□ 0.23
COMMD4-213ENST00000565834 NFATC3Q12968 1075 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 CCDC58Q4VC31 144 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 DEGS2Q6QHC5 323 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 ZNF627Q7L945 461 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 BTLAQ7Z6A9 289 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 NAXEQ8NCW5 288 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 ST6GALNAC3Q8NDV1 305 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 GJC3Q8NFK1 279 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 ISOC1Q96CN7 298 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 FBXO17Q96EF6 278 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 PLSCR4Q9NRQ2 329 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 RSL24D1Q9UHA3 163 aaKnown RBP16.46■□□□□ 0.23
COMMD4-213ENST00000565834 SH3BGRL2Q9UJC5 107 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 PROCRQ9UNN8 238 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 LRP12Q9Y561 859 aa16.46■□□□□ 0.23
COMMD4-213ENST00000565834 SIRT4Q9Y6E7 314 aaPredicted RBP16.46■□□□□ 0.23
COMMD4-213ENST00000565834 ZNF878C9JN71 531 aa16.45■□□□□ 0.22
COMMD4-213ENST00000565834 ZNF254O75437 659 aa16.45■□□□□ 0.22
COMMD4-213ENST00000565834 H2BFMP0C1H6 154 aa16.45■□□□□ 0.22
COMMD4-213ENST00000565834 OPRL1P41146 370 aa16.45■□□□□ 0.22
COMMD4-213ENST00000565834 GPR50Q13585 617 aa16.45■□□□□ 0.22
COMMD4-213ENST00000565834 OR7E24Q6IFN5 339 aa16.45■□□□□ 0.22
COMMD4-213ENST00000565834 SLC16A14Q7RTX9 510 aa16.45■□□□□ 0.22
COMMD4-213ENST00000565834 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.45■□□□□ 0.22
COMMD4-213ENST00000565834 OR10S1Q8NGN2 331 aa16.45■□□□□ 0.22
COMMD4-213ENST00000565834 RAB2BQ8WUD1 216 aa16.45■□□□□ 0.22
COMMD4-213ENST00000565834 STARD4Q96DR4 205 aa16.45■□□□□ 0.22
COMMD4-213ENST00000565834 KCNN2Q9H2S1 579 aa16.45■□□□□ 0.22
COMMD4-213ENST00000565834 ST6GALNAC2Q9UJ37 374 aa16.45■□□□□ 0.22
COMMD4-213ENST00000565834 ITGA5P08648 1049 aa16.44■□□□□ 0.22
COMMD4-213ENST00000565834 GADD45AP24522 165 aa16.44■□□□□ 0.22
COMMD4-213ENST00000565834 TGM4P49221 684 aa16.44■□□□□ 0.22
COMMD4-213ENST00000565834 CDK5R1Q15078 307 aa16.44■□□□□ 0.22
COMMD4-213ENST00000565834 RPL22L1Q6P5R6 122 aaKnown RBP16.44■□□□□ 0.22
COMMD4-213ENST00000565834 ARL9Q6T311 187 aa16.44■□□□□ 0.22
COMMD4-213ENST00000565834 SLC16A12Q6ZSM3 486 aa16.44■□□□□ 0.22
COMMD4-213ENST00000565834 Q6ZT83 130 aa16.44■□□□□ 0.22
COMMD4-213ENST00000565834 RHOUQ7L0Q8 258 aa16.44■□□□□ 0.22
COMMD4-213ENST00000565834 SKA3Q8IX90 412 aa16.44■□□□□ 0.22
COMMD4-213ENST00000565834 SFXN3Q9BWM7 321 aa16.44■□□□□ 0.22
COMMD4-213ENST00000565834 ZNF701M0R085 212 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-213ENST00000565834 OGG1O15527 345 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 PLPP2O43688 288 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 GABARAPO95166 117 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 IL18BPO95998 194 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms