RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 ELOVL3Q9HB03 270 aa7.24□□□□□ -1.25
CAPN3-213ENST00000565173 POLE4Q9NR33 117 aa7.24□□□□□ -1.25
CAPN3-213ENST00000565173 TBCCD1Q9NVR7 557 aa7.24□□□□□ -1.25
CAPN3-213ENST00000565173 RHCGQ9UBD6 479 aa7.24□□□□□ -1.25
CAPN3-213ENST00000565173 CGGBP1Q9UFW8 167 aaPredicted RBP7.24□□□□□ -1.25
CAPN3-213ENST00000565173 EGFL7Q9UHF1 273 aa7.24□□□□□ -1.25
CAPN3-213ENST00000565173 STARD10Q9Y365 291 aa7.24□□□□□ -1.25
CAPN3-213ENST00000565173 NPTNQ9Y639 398 aa7.24□□□□□ -1.25
CAPN3-213ENST00000565173 A0A1W2PPL8 197 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 ELOVL7A1L3X0 281 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 ISPDA4D126 451 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 A6NIZ1 184 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 BBIP1A8MTZ0 92 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 C12orf71A8MTZ7 269 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 EFCAB9A8MZ26 197 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 H7C1C5 153 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 WIPF1O43516 503 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 FOXH1O75593 365 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 SBK2P0C263 348 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 COX5BP10606 129 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 KITLGP21583 273 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 MSR1P21757 451 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 TUBG1P23258 451 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 GUCA1AP43080 201 aaPredicted RBP7.23□□□□□ -1.25
CAPN3-213ENST00000565173 YAP1P46937 504 aaKnown RBP7.23□□□□□ -1.25
CAPN3-213ENST00000565173 SLC6A9P48067 706 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 ARHGDIAP52565 204 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 RAP1BP61224 184 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 SEC61A1P61619 476 aaKnown RBP7.23□□□□□ -1.25
CAPN3-213ENST00000565173 LCN6P62502 163 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 RAP1AP62834 184 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 UBA52P62987 128 aaKnown RBP7.23□□□□□ -1.25
CAPN3-213ENST00000565173 GNGT1P63211 74 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 TNFAIP6P98066 277 aaPredicted RBP7.23□□□□□ -1.25
CAPN3-213ENST00000565173 ANKDD1AQ495B1 522 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 LRRC23Q53EV4 343 aaPredicted RBP7.23□□□□□ -1.25
CAPN3-213ENST00000565173 MESTQ5EB52 335 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 KLF17Q5JT82 389 aaPredicted RBP7.23□□□□□ -1.25
CAPN3-213ENST00000565173 TMPRSS11FQ6ZWK6 438 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 MBOAT2Q6ZWT7 520 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 FAM122BQ7Z309 247 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 TSEN54Q7Z6J9 526 aaKnown RBP7.23□□□□□ -1.25
CAPN3-213ENST00000565173 OAFQ86UD1 273 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 LRRC28Q86X40 367 aaPredicted RBP7.23□□□□□ -1.25
CAPN3-213ENST00000565173 RNF113BQ8IZP6 322 aaKnown RBP7.23□□□□□ -1.25
CAPN3-213ENST00000565173 OFCC1Q8IZS5 231 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 ZNF283Q8N7M2 679 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 OR2T12Q8NG77 320 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 SGMS2Q8NHU3 365 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 HAVCR1Q96D42 359 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 CMBLQ96DG6 245 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 ZMYND19Q96E35 227 aaPredicted RBP7.23□□□□□ -1.25
CAPN3-213ENST00000565173 SAMD8Q96LT4 415 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 C1orf147Q96MC9 270 aaPredicted RBP7.23□□□□□ -1.25
CAPN3-213ENST00000565173 DCLRE1CQ96SD1 692 aaKnown RBP7.23□□□□□ -1.25
CAPN3-213ENST00000565173 WACQ9BTA9 647 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 FAM107BQ9H098 131 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 NTN4Q9HB63 628 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 EMC7Q9NPA0 242 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 TUBG2Q9NRH3 451 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 TMEM106BQ9NUM4 274 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 GID8Q9NWU2 228 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 CMTM6Q9NX76 183 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 UBAP1Q9NZ09 502 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 PURGQ9UJV8 347 aaKnown RBP7.23□□□□□ -1.25
CAPN3-213ENST00000565173 NDRG4Q9ULP0 352 aaKnown RBP7.23□□□□□ -1.25
CAPN3-213ENST00000565173 ADAM18Q9Y3Q7 739 aa7.23□□□□□ -1.25
CAPN3-213ENST00000565173 F5H0A9 414 aaPredicted RBP7.22□□□□□ -1.25
CAPN3-213ENST00000565173 IMPA2O14732 288 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 AHCYL1O43865 530 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 TIMM8AO60220 97 aaPredicted RBP7.22□□□□□ -1.25
CAPN3-213ENST00000565173 PTP4A3O75365 173 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 ABHD16AO95870 558 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 CD14P08571 375 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 CTLA4P16410 223 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 ZNF12P17014 697 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 FPR2P25090 351 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 SLC9A3P48764 834 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 ERFP50548 548 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 ZNF154Q13106 437 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 TRAM2Q15035 370 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 ZBED5Q49AG3 693 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 TMEM155Q4W5P6 130 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 ZMAT1Q5H9K5 638 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 OTPQ5XKR4 325 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 ARL9Q6T311 187 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 VASH1Q7L8A9 365 aaPredicted RBP7.22□□□□□ -1.25
CAPN3-213ENST00000565173 ZER1Q7Z7L7 766 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 SLC15A3Q8IY34 581 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 BCL6BQ8N143 479 aaPredicted RBP7.22□□□□□ -1.25
CAPN3-213ENST00000565173 BPIFB2Q8N4F0 458 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 SIGLECL1Q8N7X8 197 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 PCYOX1LQ8NBM8 494 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 OR2Z1Q8NG97 314 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 ST7LQ8TDW4 575 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 ACOT11Q8WXI4 607 aaPredicted RBP7.22□□□□□ -1.25
CAPN3-213ENST00000565173 SLC7A6Q92536 515 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 Q96M85 177 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 ZNF48Q96MX3 618 aaPredicted RBP7.22□□□□□ -1.25
CAPN3-213ENST00000565173 FNDC11Q9BVV2 318 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms