RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 DEFB134Q4QY38 66 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 CYB5R2Q6BCY4 276 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 ZNF425Q6IV72 752 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 ZNF227Q86WZ6 799 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 ZNF383Q8NA42 475 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 POMGNT2Q8NAT1 580 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 AKR7LQ8NHP1 331 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 NKD1Q969G9 470 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 FOXN4Q96NZ1 517 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 SEC61A2Q9H9S3 476 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 MRM2Q9UI43 246 aaKnown RBP14.69□□□□□ -0.06
LINC00554-201ENST00000564841 TICRRQ7Z2Z1 1910 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 LRRC72A6NJI9 287 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 H7C1C5 153 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 ZNF735P0CB33 412 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 SLC6A6P31641 620 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 LCN6P62502 163 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 PRAMEF8Q5VWM4 474 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 PRAMEF7Q5VXH5 474 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 SLC35F3Q8IY50 421 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 ZNF561Q8N587 486 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 DEFB119Q8N690 84 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 CCDC74AQ96AQ1 378 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 CYYR1Q96J86 154 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 ALX4Q9H161 411 aaPredicted RBP14.69□□□□□ -0.06
LINC00554-201ENST00000564841 ETV7Q9Y603 341 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 CABIN1Q9Y6J0 2220 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 A0A1W2PPC1 479 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 LDB3O75112 727 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 ZNF585AQ6P3V2 769 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 ABHD17CQ6PCB6 329 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 TMEM92Q6UXU6 159 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 SFTPA2Q8IWL1 248 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 GPX8Q8TED1 209 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 LINC00615Q96LM1 132 aaPredicted RBP14.68□□□□□ -0.06
LINC00554-201ENST00000564841 SULT4A1Q9BR01 284 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 APOOQ9BUR5 198 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 SLC2A4RGQ9NR83 387 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 A0A1B0GWA3 101 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 UPK3AO75631 287 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 IL13RA1P78552 427 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 ARHGAP11AQ6P4F7 1023 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 RNF113BQ8IZP6 322 aaKnown RBP14.68□□□□□ -0.06
LINC00554-201ENST00000564841 GVQW1Q8N7I0 195 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 ZNF676Q8N7Q3 588 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 NPEPL1Q8NDH3 523 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 OR10H5Q8NGA6 315 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 MRGPRFQ96AM1 343 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 FAM3DQ96BQ1 224 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 FOXRED1Q96CU9 486 aaPredicted RBP14.68□□□□□ -0.06
LINC00554-201ENST00000564841 RNF126Q9BV68 326 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 TEX101Q9BY14 249 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 EGLN1Q9GZT9 426 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 PELI2Q9HAT8 420 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 SRA1Q9HD15 236 aaKnown RBP14.68□□□□□ -0.06
LINC00554-201ENST00000564841 GTF2A1LQ9UNN4 478 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 ZNF780BQ9Y6R6 833 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 TMEM235A6NFC5 223 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 DCTN6O00399 190 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 LRP3O75074 770 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 FBXO24O75426 580 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 LRRC69Q6ZNQ3 347 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 TCTEX1D2Q8WW35 142 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 ADAD1Q96M93 576 aaKnown RBP14.68□□□□□ -0.06
LINC00554-201ENST00000564841 NRSN2Q9GZP1 204 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 FN3KRPQ9HA64 309 aa14.68□□□□□ -0.06
LINC00554-201ENST00000564841 CHMP1AQ9HD42 196 aaPredicted RBP14.68□□□□□ -0.06
LINC00554-201ENST00000564841 TCRBV21S2A2A0A5A6 115 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 IFITM10A6NMD0 228 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 PRAMEF26H0Y7S4 382 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 CD2P06729 351 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 CXADRP78310 365 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 FAM76BQ5HYJ3 339 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 PRSS41Q7RTY9 318 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 RTN4RL2Q86UN3 420 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 C15orf54Q8N8G6 183 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 CA5BP1Q8WTZ4 195 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 C14orf144Q96I85 54 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 MRGPRX1Q96LB2 322 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 POTEKPQ9BYX7 375 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 STARD5Q9NSY2 213 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 LPAR3Q9UBY5 353 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 CD207Q9UJ71 328 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 KCNG2Q9UJ96 466 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 ELOA3DA6NLF2 546 aaPredicted RBP14.67□□□□□ -0.06
LINC00554-201ENST00000564841 MED6O75586 246 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 CD14P08571 375 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 ZNF888P0CJ79 500 aaPredicted RBP14.67□□□□□ -0.06
LINC00554-201ENST00000564841 LAP3P28838 519 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 PEBP1P30086 187 aaKnown RBP14.67□□□□□ -0.06
LINC00554-201ENST00000564841 SERPINF1P36955 418 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 ACTR1BP42025 376 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 PPM1FP49593 454 aaPredicted RBP14.67□□□□□ -0.06
LINC00554-201ENST00000564841 CAV2P51636 162 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 ELOA3BQ3SY89 546 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 AWAT1Q58HT5 328 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 Q6ZS52 159 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 SLC30A7Q8NEW0 376 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 ELOA3Q8NG57 546 aa14.67□□□□□ -0.06
LINC00554-201ENST00000564841 OR10G6Q8NH81 332 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms