RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 TAF13Q15543 124 aa11.25□□□□□ -0.61
CLK3-214ENST00000564096 TIGD6Q17RP2 521 aa11.25□□□□□ -0.61
CLK3-214ENST00000564096 ZNF829Q3KNS6 432 aaPredicted RBP11.25□□□□□ -0.61
CLK3-214ENST00000564096 SLC25A35Q3KQZ1 300 aa11.25□□□□□ -0.61
CLK3-214ENST00000564096 TMEM53Q6P2H8 277 aa11.25□□□□□ -0.61
CLK3-214ENST00000564096 DEGS2Q6QHC5 323 aa11.25□□□□□ -0.61
CLK3-214ENST00000564096 RHOUQ7L0Q8 258 aa11.25□□□□□ -0.61
CLK3-214ENST00000564096 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.25□□□□□ -0.61
CLK3-214ENST00000564096 ZNF679Q8IYX0 411 aa11.25□□□□□ -0.61
CLK3-214ENST00000564096 GABRG1Q8N1C3 465 aa11.25□□□□□ -0.61
CLK3-214ENST00000564096 YIPF7Q8N8F6 280 aa11.25□□□□□ -0.61
CLK3-214ENST00000564096 RNF133Q8WVZ7 376 aa11.25□□□□□ -0.61
CLK3-214ENST00000564096 MUL1Q969V5 352 aa11.25□□□□□ -0.61
CLK3-214ENST00000564096 SLAMF6Q96DU3 332 aa11.25□□□□□ -0.61
CLK3-214ENST00000564096 LRRC46Q96FV0 321 aa11.25□□□□□ -0.61
CLK3-214ENST00000564096 OR8B4Q96RC9 309 aa11.25□□□□□ -0.61
CLK3-214ENST00000564096 ABHD6Q9BV23 337 aa11.25□□□□□ -0.61
CLK3-214ENST00000564096 TTTY10Q9BZA0 68 aa11.25□□□□□ -0.61
CLK3-214ENST00000564096 NIPAL2Q9H841 368 aa11.25□□□□□ -0.61
CLK3-214ENST00000564096 OBP2BQ9NPH6 170 aa11.25□□□□□ -0.61
CLK3-214ENST00000564096 CLEC2DQ9UHP7 191 aa11.25□□□□□ -0.61
CLK3-214ENST00000564096 FBXL3Q9UKT7 428 aa11.25□□□□□ -0.61
CLK3-214ENST00000564096 KLHDC2Q9Y2U9 406 aa11.25□□□□□ -0.61
CLK3-214ENST00000564096 BOD1L1Q8NFC6 3051 aa11.25□□□□□ -0.61
CLK3-214ENST00000564096 ITPR1Q14643 2758 aa11.25□□□□□ -0.61
CLK3-214ENST00000564096 A0A096LPE4 126 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 A0A1W2PPZ6 126 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 METTL15A6NJ78 407 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 J3QLW9 94 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 DOK2O60496 412 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 LYZL6O75951 148 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 LCKP06239 509 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 H2BFMP0C1H6 154 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 HSMCR30P0CW71 290 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 HOXB1P14653 301 aaPredicted RBP11.24□□□□□ -0.61
CLK3-214ENST00000564096 ZNF19P17023 458 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 JUNBP17275 347 aaPredicted RBP11.24□□□□□ -0.61
CLK3-214ENST00000564096 HSD11B1P28845 292 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 ARR3P36575 388 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 ECH1Q13011 328 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 MLLT11Q13015 90 aaPredicted RBP11.24□□□□□ -0.61
CLK3-214ENST00000564096 TBRG1Q3YBR2 411 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 TP53I3Q53FA7 332 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 C1QTNF12Q5T7M4 302 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 OR2G6Q5TZ20 316 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 OTPQ5XKR4 325 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 XAF1Q6GPH4 301 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 CORO6Q6QEF8 472 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 SSX6Q7RTT6 188 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 GPR141Q7Z602 305 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 LUZP2Q86TE4 346 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 FJX1Q86VR8 437 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 RFLNBQ8N5W9 214 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 ZNF610Q8N9Z0 462 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 ST7LQ8TDW4 575 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 SMAP2Q8WU79 429 aaPredicted RBP11.24□□□□□ -0.61
CLK3-214ENST00000564096 SPRYD4Q8WW59 207 aaPredicted RBP11.24□□□□□ -0.61
CLK3-214ENST00000564096 HTRA1Q92743 480 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 UFD1Q92890 307 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 ATF6BQ99941 703 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 SH3GL3Q99963 347 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 USB1Q9BQ65 265 aaKnown RBP11.24□□□□□ -0.61
CLK3-214ENST00000564096 HDHD5Q9BXW7 423 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 RNF121Q9H920 327 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 ISYNA1Q9NPH2 558 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 ACOXLQ9NUZ1 547 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 ELOVL5Q9NYP7 299 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 PLEK2Q9NYT0 353 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 ATPIF1Q9UII2 106 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 LSM2Q9Y333 95 aaKnown RBP11.24□□□□□ -0.61
CLK3-214ENST00000564096 TIMM10BQ9Y5J6 103 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 ATRXP46100 2492 aa11.24□□□□□ -0.61
CLK3-214ENST00000564096 RER1O15258 196 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 SGCEO43556 437 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 NOL3O60936 208 aaKnown RBP11.23□□□□□ -0.61
CLK3-214ENST00000564096 WNT11O96014 354 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 APOC1P02654 83 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 SCG5P05408 212 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 ADRA2AP08913 450 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 PSKH1P11801 424 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 CD79AP11912 226 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 ZNF32P17041 273 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 PAX7P23759 505 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 OPRL1P41146 370 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 ASCL1P50553 236 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 HCCSP53701 268 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 PLP2Q04941 152 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 ACSM1Q08AH1 577 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 CCDC58Q4VC31 144 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 C4orf17Q53FE4 359 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 ELFN2Q5R3F8 820 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 SYT6Q5T7P8 510 aaPredicted RBP11.23□□□□□ -0.61
CLK3-214ENST00000564096 LRRN1Q6UXK5 716 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 CFAP77Q6ZQR2 320 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 SPATC1Q76KD6 591 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 VASH1Q7L8A9 365 aaPredicted RBP11.23□□□□□ -0.61
CLK3-214ENST00000564096 BHLHA15Q7RTS1 189 aaPredicted RBP11.23□□□□□ -0.61
CLK3-214ENST00000564096 SSX8Q7RTT4 187 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 CXorf67Q86X51 503 aaPredicted RBP11.23□□□□□ -0.61
CLK3-214ENST00000564096 ALDH16A1Q8IZ83 802 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms