RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 CST2P09228 141 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 CD36P16671 472 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 PSMB10P40306 273 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 HIST1H3AP68431 136 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 BDH1Q02338 343 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 ROM1Q03395 351 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 TPBGQ13641 420 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 HIST2H3PS2Q5TEC6 136 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 LIPKQ5VXJ0 399 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 KCTD18Q6PI47 426 aaPredicted RBP8.92□□□□□ -0.98
SMG1-208ENST00000563448 KLHL24Q6TFL4 600 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 HIST2H3AQ71DI3 136 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 ZNF627Q7L945 461 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 KCTD20Q7Z5Y7 419 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 YIPF7Q8N8F6 280 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 ST6GALNAC3Q8NDV1 305 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 OR2AJ1Q8NGZ0 328 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 RNF133Q8WVZ7 376 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 SLAMF6Q96DU3 332 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 FBXO17Q96EF6 278 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 C1orf198Q9H425 327 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 ELOVL3Q9HB03 270 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 NDUFA13Q9P0J0 144 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 IKZF2Q9UKS7 526 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 POLR1DQ9Y2S0 133 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 ITPR1Q14643 2758 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 MYO7BQ6PIF6 2116 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 RTTNQ86VV8 2226 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 PNMA8CA0A1B0GUJ8 204 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 RER1O15258 196 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 CAPZA2P47755 286 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 NFATC3Q12968 1075 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 AQP6Q13520 282 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 NRN1LQ496H8 165 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 LIPNQ5VXI9 398 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 ZNF813Q6ZN06 617 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 SLC16A12Q6ZSM3 486 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 ABHD12BQ7Z5M8 362 aaPredicted RBP8.92□□□□□ -0.98
SMG1-208ENST00000563448 KRT77Q7Z794 578 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 ANKRD13BQ86YJ7 626 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 EGFL6Q8IUX8 553 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 SKA3Q8IX90 412 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 PHC2Q8IXK0 858 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 ZNF679Q8IYX0 411 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 FGFBP3Q8TAT2 258 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 ZFP3Q96NJ6 502 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 MROQ9BYG7 248 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 PNRC2Q9NPJ4 139 aaKnown RBP8.92□□□□□ -0.98
SMG1-208ENST00000563448 TRIM36Q9NQ86 728 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 ST6GALNAC2Q9UJ37 374 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 SH3BGRL2Q9UJC5 107 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 PROCRQ9UNN8 238 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 SF3B6Q9Y3B4 125 aaKnown RBP8.92□□□□□ -0.98
SMG1-208ENST00000563448 LRP12Q9Y561 859 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 OGG1O15527 345 aa8.91□□□□□ -0.98
SMG1-208ENST00000563448 RPP14O95059 124 aaKnown RBP8.91□□□□□ -0.98
SMG1-208ENST00000563448 IL18BPO95998 194 aa8.91□□□□□ -0.98
SMG1-208ENST00000563448 TACSTD2P09758 323 aa8.91□□□□□ -0.98
SMG1-208ENST00000563448 PATE4P0C8F1 98 aa8.91□□□□□ -0.98
SMG1-208ENST00000563448 CELP19835 753 aa8.91□□□□□ -0.98
SMG1-208ENST00000563448 NR4A1P22736 598 aa8.91□□□□□ -0.98
SMG1-208ENST00000563448 IGHV1-2P23083 117 aa8.91□□□□□ -0.98
SMG1-208ENST00000563448 MPGP29372 298 aa8.91□□□□□ -0.98
SMG1-208ENST00000563448 GBX2P52951 348 aaPredicted RBP8.91□□□□□ -0.98
SMG1-208ENST00000563448 PMPCAQ10713 525 aa8.91□□□□□ -0.98
SMG1-208ENST00000563448 EIF2S3LQ2VIR3 472 aaKnown RBP8.91□□□□□ -0.98
SMG1-208ENST00000563448 CCDC92Q53HC0 331 aaPredicted RBP8.91□□□□□ -0.98
SMG1-208ENST00000563448 OR7E24Q6IFN5 339 aa8.91□□□□□ -0.98
SMG1-208ENST00000563448 NCCRP1Q6ZVX7 275 aaPredicted RBP8.91□□□□□ -0.98
SMG1-208ENST00000563448 FAM220AQ7Z4H9 259 aa8.91□□□□□ -0.98
SMG1-208ENST00000563448 ZNF610Q8N9Z0 462 aa8.91□□□□□ -0.98
SMG1-208ENST00000563448 OR1K1Q8NGR3 316 aa8.91□□□□□ -0.98
SMG1-208ENST00000563448 UFD1Q92890 307 aa8.91□□□□□ -0.98
SMG1-208ENST00000563448 FAM192AQ9GZU8 254 aa8.91□□□□□ -0.98
SMG1-208ENST00000563448 CENPMQ9NSP4 180 aa8.91□□□□□ -0.98
SMG1-208ENST00000563448 NDUFB11Q9NX14 153 aa8.91□□□□□ -0.98
SMG1-208ENST00000563448 ZNF224Q9NZL3 707 aa8.91□□□□□ -0.98
SMG1-208ENST00000563448 ENPP5Q9UJA9 477 aa8.91□□□□□ -0.98
SMG1-208ENST00000563448 USP24Q9UPU5 2620 aa8.91□□□□□ -0.98
SMG1-208ENST00000563448 A0A096LPE4 126 aa8.9□□□□□ -0.98
SMG1-208ENST00000563448 A0A0G2JNJ9 132 aa8.9□□□□□ -0.98
SMG1-208ENST00000563448 A0A1W2PPZ6 126 aa8.9□□□□□ -0.98
SMG1-208ENST00000563448 CCDC160A6NGH7 325 aa8.9□□□□□ -0.98
SMG1-208ENST00000563448 HSPB2A8KAH6 182 aa8.9□□□□□ -0.98
SMG1-208ENST00000563448 SRSF10O75494 262 aaKnown RBP8.9□□□□□ -0.98
SMG1-208ENST00000563448 CNOT4O95628 575 aaKnown RBP8.9□□□□□ -0.98
SMG1-208ENST00000563448 ZNF32P17041 273 aa8.9□□□□□ -0.98
SMG1-208ENST00000563448 GADD45AP24522 165 aa8.9□□□□□ -0.98
SMG1-208ENST00000563448 CTSSP25774 331 aa8.9□□□□□ -0.98
SMG1-208ENST00000563448 OPRL1P41146 370 aa8.9□□□□□ -0.98
SMG1-208ENST00000563448 TGM4P49221 684 aa8.9□□□□□ -0.98
SMG1-208ENST00000563448 TAS2R43P59537 309 aa8.9□□□□□ -0.98
SMG1-208ENST00000563448 NANOS3P60323 173 aaKnown RBP8.9□□□□□ -0.98
SMG1-208ENST00000563448 HSPB2Q16082 182 aa8.9□□□□□ -0.98
SMG1-208ENST00000563448 DMKNQ6E0U4 476 aaPredicted RBP8.9□□□□□ -0.98
SMG1-208ENST00000563448 DEGS2Q6QHC5 323 aa8.9□□□□□ -0.98
SMG1-208ENST00000563448 Q6ZT83 130 aa8.9□□□□□ -0.98
SMG1-208ENST00000563448 SLC16A14Q7RTX9 510 aa8.9□□□□□ -0.98
SMG1-208ENST00000563448 P2RY8Q86VZ1 359 aa8.9□□□□□ -0.98
SMG1-208ENST00000563448 GJC3Q8NFK1 279 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms