RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 UNQ9370/PRO34162Q6UXP9 181 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 FOXL2NBQ6ZUU3 175 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 OR10S1Q8NGN2 331 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 RNF133Q8WVZ7 376 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 DCBLD2Q96PD2 775 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 ULBP2Q9BZM5 246 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 CENPMQ9NSP4 180 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 PLEKHB1Q9UF11 243 aaPredicted RBP15.95■□□□□ 0.14
COMMD4-208ENST00000563220 DAPK2Q9UIK4 370 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 GDF2Q9UK05 429 aaPredicted RBP15.95■□□□□ 0.14
COMMD4-208ENST00000563220 FBXL3Q9UKT7 428 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 MCTS1Q9ULC4 181 aaKnown RBP15.95■□□□□ 0.14
COMMD4-208ENST00000563220 DNAJC13O75165 2243 aa15.95■□□□□ 0.14
COMMD4-208ENST00000563220 A0A1W2PPK0 400 aa15.94■□□□□ 0.14
COMMD4-208ENST00000563220 TAF4O00268 1085 aa15.94■□□□□ 0.14
COMMD4-208ENST00000563220 SERPINA3P01011 423 aa15.94■□□□□ 0.14
COMMD4-208ENST00000563220 PPP5CP53041 499 aa15.94■□□□□ 0.14
COMMD4-208ENST00000563220 WDR38Q5JTN6 314 aa15.94■□□□□ 0.14
COMMD4-208ENST00000563220 CFAP77Q6ZQR2 320 aa15.94■□□□□ 0.14
COMMD4-208ENST00000563220 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.94■□□□□ 0.14
COMMD4-208ENST00000563220 OR5AK2Q8NH90 309 aa15.94■□□□□ 0.14
COMMD4-208ENST00000563220 PPP1R14AQ96A00 147 aa15.94■□□□□ 0.14
COMMD4-208ENST00000563220 NABP1Q96AH0 204 aa15.94■□□□□ 0.14
COMMD4-208ENST00000563220 TMEM45BQ96B21 275 aa15.94■□□□□ 0.14
COMMD4-208ENST00000563220 SLAMF6Q96DU3 332 aa15.94■□□□□ 0.14
COMMD4-208ENST00000563220 C4orf45Q96LM5 186 aa15.94■□□□□ 0.14
COMMD4-208ENST00000563220 OR14A2Q96R54 314 aa15.94■□□□□ 0.14
COMMD4-208ENST00000563220 C1orf198Q9H425 327 aa15.94■□□□□ 0.14
COMMD4-208ENST00000563220 A0A075B6Q4 140 aa15.93■□□□□ 0.14
COMMD4-208ENST00000563220 CTDSP2O14595 271 aa15.93■□□□□ 0.14
COMMD4-208ENST00000563220 SRSF10O75494 262 aaKnown RBP15.93■□□□□ 0.14
COMMD4-208ENST00000563220 NCR1O76036 304 aa15.93■□□□□ 0.14
COMMD4-208ENST00000563220 MFGE8Q08431 387 aaPredicted RBP15.93■□□□□ 0.14
COMMD4-208ENST00000563220 ZNF169Q14929 603 aaPredicted RBP15.93■□□□□ 0.14
COMMD4-208ENST00000563220 LINGO2Q7L985 606 aa15.93■□□□□ 0.14
COMMD4-208ENST00000563220 TUSC5Q8IXB3 177 aa15.93■□□□□ 0.14
COMMD4-208ENST00000563220 RDH10Q8IZV5 341 aa15.93■□□□□ 0.14
COMMD4-208ENST00000563220 TEX19Q8NA77 164 aa15.93■□□□□ 0.14
COMMD4-208ENST00000563220 TAAR6Q96RI8 345 aa15.93■□□□□ 0.14
COMMD4-208ENST00000563220 ZNF416Q9BWM5 594 aa15.93■□□□□ 0.14
COMMD4-208ENST00000563220 ASH2LQ9UBL3 628 aa15.93■□□□□ 0.14
COMMD4-208ENST00000563220 SLC22A13Q9Y226 551 aa15.93■□□□□ 0.14
COMMD4-208ENST00000563220 POLR1DQ9Y2S0 133 aa15.93■□□□□ 0.14
COMMD4-208ENST00000563220 MTNR1BP49286 362 aa15.93■□□□□ 0.14
COMMD4-208ENST00000563220 IFITM3Q01628 133 aa15.93■□□□□ 0.14
COMMD4-208ENST00000563220 YIF1BQ5BJH7 314 aa15.93■□□□□ 0.14
COMMD4-208ENST00000563220 DEGS2Q6QHC5 323 aa15.93■□□□□ 0.14
COMMD4-208ENST00000563220 NR2C2APQ86WQ0 139 aa15.93■□□□□ 0.14
COMMD4-208ENST00000563220 ITPKCQ96DU7 683 aa15.93■□□□□ 0.14
COMMD4-208ENST00000563220 PRRG4Q9BZD6 226 aa15.93■□□□□ 0.14
COMMD4-208ENST00000563220 NELFAQ9H3P2 528 aa15.93■□□□□ 0.14
COMMD4-208ENST00000563220 CRLF2Q9HC73 371 aa15.93■□□□□ 0.14
COMMD4-208ENST00000563220 CLEC4AQ9UMR7 237 aa15.93■□□□□ 0.14
COMMD4-208ENST00000563220 CAMK2AQ9UQM7 478 aa15.93■□□□□ 0.14
COMMD4-208ENST00000563220 URB1O60287 2271 aaKnown RBP15.92■□□□□ 0.14
COMMD4-208ENST00000563220 GPR171O14626 319 aa15.92■□□□□ 0.14
COMMD4-208ENST00000563220 RER1O15258 196 aa15.92■□□□□ 0.14
COMMD4-208ENST00000563220 PIN1P1O15428 100 aa15.92■□□□□ 0.14
COMMD4-208ENST00000563220 ZNHIT1O43257 154 aa15.92■□□□□ 0.14
COMMD4-208ENST00000563220 ZNF254O75437 659 aa15.92■□□□□ 0.14
COMMD4-208ENST00000563220 GATBO75879 557 aaKnown RBP15.92■□□□□ 0.14
COMMD4-208ENST00000563220 MSR1P21757 451 aa15.92■□□□□ 0.14
COMMD4-208ENST00000563220 LSM6P62312 80 aaKnown RBP15.92■□□□□ 0.14
COMMD4-208ENST00000563220 ODF4Q2M2E3 257 aa15.92■□□□□ 0.14
COMMD4-208ENST00000563220 Q6ZS92 163 aa15.92■□□□□ 0.14
COMMD4-208ENST00000563220 CHMP1BQ7LBR1 199 aa15.92■□□□□ 0.14
COMMD4-208ENST00000563220 IL17RDQ8NFM7 739 aa15.92■□□□□ 0.14
COMMD4-208ENST00000563220 OR2AJ1Q8NGZ0 328 aa15.92■□□□□ 0.14
COMMD4-208ENST00000563220 NEURL2Q9BR09 285 aa15.92■□□□□ 0.14
COMMD4-208ENST00000563220 NOSIPQ9Y314 301 aaKnown RBP15.92■□□□□ 0.14
COMMD4-208ENST00000563220 PHF3Q92576 2039 aaKnown RBP15.92■□□□□ 0.14
COMMD4-208ENST00000563220 TNRC6AQ8NDV7 1962 aaKnown RBP15.91■□□□□ 0.14
COMMD4-208ENST00000563220 ISPDA4D126 451 aa15.91■□□□□ 0.14
COMMD4-208ENST00000563220 TMEM212A6NML5 194 aa15.91■□□□□ 0.14
COMMD4-208ENST00000563220 UCHL1P09936 223 aa15.91■□□□□ 0.14
COMMD4-208ENST00000563220 H2BFMP0C1H6 154 aa15.91■□□□□ 0.14
COMMD4-208ENST00000563220 GUCA1AP43080 201 aaPredicted RBP15.91■□□□□ 0.14
COMMD4-208ENST00000563220 CCR9P51686 369 aa15.91■□□□□ 0.14
COMMD4-208ENST00000563220 ENDOGQ14249 297 aaKnown RBP15.91■□□□□ 0.14
COMMD4-208ENST00000563220 PAMR1Q6UXH9 720 aa15.91■□□□□ 0.14
COMMD4-208ENST00000563220 CATSPERDQ86XM0 798 aa15.91■□□□□ 0.14
COMMD4-208ENST00000563220 GPR137CQ8N3F9 429 aa15.91■□□□□ 0.14
COMMD4-208ENST00000563220 ZNF676Q8N7Q3 588 aa15.91■□□□□ 0.14
COMMD4-208ENST00000563220 RBMXL3Q8N7X1 1067 aaKnown RBP15.91■□□□□ 0.14
COMMD4-208ENST00000563220 OR10AC1Q8NH08 325 aa15.91■□□□□ 0.14
COMMD4-208ENST00000563220 ORAI1Q96D31 301 aa15.91■□□□□ 0.14
COMMD4-208ENST00000563220 ALKBH3Q96Q83 286 aaPredicted RBP15.91■□□□□ 0.14
COMMD4-208ENST00000563220 CALHM2Q9HA72 323 aa15.91■□□□□ 0.14
COMMD4-208ENST00000563220 BCO1Q9HAY6 547 aa15.91■□□□□ 0.14
COMMD4-208ENST00000563220 R4GMQ9 66 aa15.91■□□□□ 0.14
COMMD4-208ENST00000563220 CEP295Q9C0D2 2601 aa15.91■□□□□ 0.14
COMMD4-208ENST00000563220 A0A1B0GVC2 190 aa15.91■□□□□ 0.14
COMMD4-208ENST00000563220 ACOD1A6NK06 481 aa15.91■□□□□ 0.14
COMMD4-208ENST00000563220 ZNF879B4DU55 563 aa15.91■□□□□ 0.14
COMMD4-208ENST00000563220 MRPL33O75394 65 aaKnown RBP15.91■□□□□ 0.14
COMMD4-208ENST00000563220 TGM6O95932 706 aa15.91■□□□□ 0.14
COMMD4-208ENST00000563220 ZNF84P51523 738 aa15.91■□□□□ 0.14
COMMD4-208ENST00000563220 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.91■□□□□ 0.14
COMMD4-208ENST00000563220 SIAH3Q8IW03 269 aa15.91■□□□□ 0.14
COMMD4-208ENST00000563220 LRRC18Q8N456 261 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms