RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 OR2M4Q96R27 311 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 MRI1Q9BV20 369 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 GLIPR2Q9H4G4 154 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 CSAG2Q9Y5P2 127 aa12.68□□□□□ -0.38
GTF3C1-203ENST00000562609 FANCMQ8IYD8 2048 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 TCRBV21S2A2A0A5A6 115 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 FAM157AC9JC47 383 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 DCNP07585 359 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 HCKP08631 526 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 FCGR3AP08637 254 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 MAKP20794 623 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 SLC2A5P22732 501 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 OR8G1Q15617 311 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 STAC2Q6ZMT1 411 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 FRRS1Q6ZNA5 592 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 GABRG1Q8N1C3 465 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 OR10G6Q8NH81 332 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 MAFIPQ8WZ33 124 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 MS4A6EQ96DS6 147 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 ZNF559Q9BR84 538 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 DUSP15Q9H1R2 295 aaPredicted RBP12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 ATG5Q9H1Y0 275 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 A0A087WV48 116 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 A0A1W2PPE2 198 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 A0A1W2PR48 441 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 FBXO24O75426 580 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 MED6O75586 246 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 RAB3DO95716 219 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 ADRA2CP18825 462 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 NCBP2P52298 156 aaKnown RBP eCLIP12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 ACTA2P62736 377 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 ACTG2P63267 376 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 ZNF761Q86XN6 746 aaPredicted RBP12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 ACOT4Q8N9L9 421 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 AVL9Q8NBF6 648 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 PHYHIPQ92561 330 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 C16orf58Q96GQ5 468 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 SMIM8Q96KF7 97 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 POTEKPQ9BYX7 375 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 RGCCQ9H4X1 137 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 APOBEC3BQ9UH17 382 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 CD207Q9UJ71 328 aa12.67□□□□□ -0.38
GTF3C1-203ENST00000562609 A0A0A6YYD5 115 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 PRR19A6NJB7 356 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 PSMD9O00233 223 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 BCAT2O15382 392 aaPredicted RBP12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 CLEC3AO75596 197 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 AMY2AP04746 511 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 SERPINA5P05154 406 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 HMGN2P05204 90 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 PRSS3P35030 304 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 EFNB2P52799 333 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 ZNF585AQ6P3V2 769 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 MTSS1LQ765P7 747 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 PFN4Q8NHR9 129 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 SAT2Q96F10 170 aaPredicted RBP12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 SLC25A21Q9BQT8 299 aaPredicted RBP12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 TCEAL2Q9H3H9 227 aaPredicted RBP12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 C20orf141Q9NUB4 165 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 KLHL28Q9NXS3 571 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 DOK5Q9P104 306 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 GDF2Q9UK05 429 aaPredicted RBP12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 TMEM184BQ9Y519 407 aaPredicted RBP12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 HEXBP07686 556 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 ITGA5P08648 1049 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 FRKP42685 505 aaPredicted RBP12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 RPS10P46783 165 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 ID4P47928 161 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 SOX2P48431 317 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 SULT1A1P50225 295 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 DVL1P1P54792 670 aaPredicted RBP12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 NUTF2P61970 127 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 KCNAB1Q14722 419 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 SLC9A5Q14940 896 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 SCGB2B2Q4G0G5 96 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 PDZD11Q5EBL8 140 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 NKAIN2Q5VXU1 208 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 Q6ZS52 159 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 TMEFF1Q8IYR6 380 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 SYS1Q8N2H4 156 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 RRNAD1Q96FB5 475 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 TCTN2Q96GX1 697 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 POM121Q96HA1 1249 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 ZNF350Q9GZX5 532 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 PRDM7Q9NQW5 492 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 WIF1Q9Y5W5 379 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 GPRIN2O60269 458 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 DNAJB6O75190 326 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 F10P00742 488 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 MBP02144 154 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 MELTFP08582 738 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 SNRPCP09234 159 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 HIST1H1TP22492 207 aaPredicted RBP12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 IGFBP4P22692 258 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 BIKQ13323 160 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 ABHD17CQ6PCB6 329 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 OR13C2Q8NGS9 318 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 OR4C6Q8NH72 309 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 ZCCHC10Q8TBK6 192 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 CNRIP1Q96F85 164 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms