RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 TNFRSF4P43489 277 aa12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 EIF2B1Q14232 305 aaKnown RBP12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 ELOCQ15369 112 aa12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 FNDC7Q5VTL7 733 aa12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 HAGHLQ6PII5 290 aaPredicted RBP12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 PRR22Q8IZ63 422 aa12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 OR13C3Q8NGS6 347 aa12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 MMABQ96EY8 250 aaPredicted RBP12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 RPP25Q9BUL9 199 aaKnown RBP12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 SEMA6CQ9H3T2 930 aa12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 CYB5R1Q9UHQ9 305 aa12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 F5P12259 2224 aa12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 A0A1W2PQF6 199 aa12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 EEF1E1-BLOC1S5C9J1V9 151 aa12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 HCRTR2O43614 444 aa12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 CELA2BP08218 269 aaPredicted RBP12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 AVPR2P30518 371 aa12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 RPL35P42766 123 aaKnown RBP12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 IL13RA1P78552 427 aa12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 PPP1R1AQ13522 171 aa12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 VWA2Q5GFL6 755 aa12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 TEX30Q5JUR7 227 aa12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 Q6ZSR6 202 aa12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 LYG2Q86SG7 212 aa12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 ASB12Q8WXK4 309 aa12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 ADOQ96SZ5 270 aa12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 EDEM2Q9BV94 578 aa12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 PRMT8Q9NR22 394 aaPredicted RBP12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 NUP210LQ5VU65 1888 aa12.57□□□□□ -0.4
VPS9D1-202ENST00000561976 USP34Q70CQ2 3546 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 TTLL8A6PVC2 850 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 C17orf105B2RV13 164 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 KCNAB3O43448 404 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 TNFP01375 233 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 CD74P04233 296 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 PPM1FP49593 454 aaPredicted RBP12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 IGLV3-21P80748 117 aaPredicted RBP12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 TFF2Q03403 129 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 GPM6BQ13491 265 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 TMEM240Q5SV17 173 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 CHRDL2Q6WN34 429 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 FAM160A2Q8N612 972 aaPredicted RBP12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 FRMD1Q8N878 549 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 C19orf47Q8N9M1 422 aaKnown RBP12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 CHST4Q8NCG5 386 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 PHB2Q99623 299 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 PRRT1Q99946 306 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 CST11Q9H112 138 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 CERS4Q9HA82 394 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 ZNF304Q9HCX3 659 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 KNL1Q8NG31 2342 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 TMEM218A2RU14 115 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 PRSS37A4D1T9 235 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 C5orf67F2Z3F1 127 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 FADS1O60427 444 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 CD96P40200 585 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 SRSF4Q08170 494 aaKnown RBP12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 MEF2DQ14814 521 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 ACKR1Q16570 336 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 SHEQ5VZ18 495 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 UQCC3Q6UW78 93 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 SVBPQ8N300 66 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 FAM174AQ8TBP5 190 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 ABHD6Q9BV23 337 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 NXF5Q9H1B4 397 aaKnown RBP12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 IGFLR1Q9H665 355 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 PNO1Q9NRX1 252 aaKnown RBP12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 MRPL22Q9NWU5 206 aaKnown RBP12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 MBD2Q9UBB5 411 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 TMED7Q9Y3B3 224 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 EMC9Q9Y3B6 208 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 LRP12Q9Y561 859 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 CLDN16Q9Y5I7 305 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 CHD9Q3L8U1 2897 aa12.56□□□□□ -0.4
VPS9D1-202ENST00000561976 C13orf42A0A1B0GVH6 325 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 C5orf51A6NDU8 294 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 SULT2B1O00204 365 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 ZBTB25P24278 435 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 HHEXQ03014 270 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 INPP5JQ15735 1006 aaPredicted RBP12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 STK11Q15831 433 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 CORO6Q6QEF8 472 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 PARM1Q6UWI2 310 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 TRAPPC6BQ86SZ2 158 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 SLC25A42Q86VD7 318 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 FJX1Q86VR8 437 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 PUSL1Q8N0Z8 303 aaKnown RBP12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 GTPBP8Q8N3Z3 284 aaPredicted RBP12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 ARHGEF39Q8N4T4 335 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 ZNF321PQ8N8H1 164 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 PAQR8Q8TEZ7 354 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 FGF14Q92915 247 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 NUDT9Q9BW91 350 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 FAM117AQ9C073 453 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 NDRG3Q9UGV2 375 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 HHLA2Q9UM44 414 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 XIRP2A4UGR9 3374 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 C9orf170A2RU37 121 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 MEGF11A6BM72 1044 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 IL33O95760 270 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms