RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 CCDC182A6NF36 153 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 SLC22A31A6NKX4 558 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 RER1O15258 196 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 SELENOFO60613 162 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 ENTPD6O75354 484 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 PTHP01270 115 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 SPARCP09486 303 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 CECR9P0C854 216 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 PTAFRP25105 342 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 CD40P25942 277 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 APEX1P27695 318 aaKnown RBP8.93□□□□□ -0.98
LRRC28-221ENST00000561276 HCCSP53701 268 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 CDH11P55287 796 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 HIST1H3AP68431 136 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 IL5RAQ01344 420 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 SCRN3Q0VDG4 424 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 IL18R1Q13478 541 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 MAD2L1BPQ15013 274 aaPredicted RBP8.93□□□□□ -0.98
LRRC28-221ENST00000561276 SNCBQ16143 134 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 PCK2Q16822 640 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 BEX5Q5H9J7 111 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 HIST2H3PS2Q5TEC6 136 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 LCN1P1Q5VSP4 162 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 ZNF787Q6DD87 383 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 TMEM154Q6P9G4 183 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 HIST2H3AQ71DI3 136 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 DPY19L4Q7Z388 723 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 MYPOPQ86VE0 399 aaPredicted RBP8.93□□□□□ -0.98
LRRC28-221ENST00000561276 ZNF584Q8IVC4 421 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 LINC00346Q8IVM7 164 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 TIGD4Q8IY51 512 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 ZNF295-AS1Q8N0V1 137 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 SETD9Q8NE22 299 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 IL17RDQ8NFM7 739 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 SMAP2Q8WU79 429 aaPredicted RBP8.93□□□□□ -0.98
LRRC28-221ENST00000561276 RFKQ969G6 155 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 Q96MT0 163 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 INTS14Q96SY0 518 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 WNT5BQ9H1J7 359 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 RASSF4Q9H2L5 321 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 CLN6Q9NWW5 311 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 HAO2Q9NYQ3 351 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 PLEK2Q9NYT0 353 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 WARS2Q9UGM6 360 aaKnown RBP8.93□□□□□ -0.98
LRRC28-221ENST00000561276 KCNG2Q9UJ96 466 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 FBXL3Q9UKT7 428 aa8.93□□□□□ -0.98
LRRC28-221ENST00000561276 DOPEY1Q5JWR5 2465 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 SNTNA6NMZ2 147 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 ABCD4O14678 606 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 SGCEO43556 437 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 WBP4O75554 376 aaKnown RBP8.92□□□□□ -0.98
LRRC28-221ENST00000561276 PLAUP00749 431 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 CRYAAP02489 173 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 CD3EP07766 207 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 MRPL3P09001 348 aaKnown RBP8.92□□□□□ -0.98
LRRC28-221ENST00000561276 PSKH1P11801 424 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 CCL2P13500 99 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 STOMP27105 288 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 LOXP28300 417 aaPredicted RBP8.92□□□□□ -0.98
LRRC28-221ENST00000561276 HTR1FP30939 366 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 ATP6V1E1P36543 226 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 NAA10P41227 235 aaPredicted RBP8.92□□□□□ -0.98
LRRC28-221ENST00000561276 NAAAQ02083 359 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 TMED1Q13445 227 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 GGTLC2Q14390 218 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 CCDC92Q53HC0 331 aaPredicted RBP8.92□□□□□ -0.98
LRRC28-221ENST00000561276 SLC18B1Q6NT16 456 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 ZNF774Q6NX45 483 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 CFAP77Q6ZQR2 320 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 USP51Q70EK9 711 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 SHFQ7M4L6 423 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 SLC16A9Q7RTY1 509 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 DCXRQ7Z4W1 244 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 C8orf59Q8N0T1 100 aaPredicted RBP8.92□□□□□ -0.98
LRRC28-221ENST00000561276 OR6N2Q8NGY6 317 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 CNIH3Q8TBE1 160 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 THEM6Q8WUY1 208 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 APH1BQ8WW43 257 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 MAP6Q96JE9 813 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 C1orf198Q9H425 327 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 AMBNQ9NP70 447 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 GDF2Q9UK05 429 aaPredicted RBP8.92□□□□□ -0.98
LRRC28-221ENST00000561276 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.92□□□□□ -0.98
LRRC28-221ENST00000561276 HSPE1-MOB4S4R3N1 261 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 SPTBN1Q01082 2364 aaKnown RBP8.92□□□□□ -0.98
LRRC28-221ENST00000561276 PRR14LQ5THK1 2151 aa8.92□□□□□ -0.98
LRRC28-221ENST00000561276 ICE1Q9Y2F5 2266 aa8.91□□□□□ -0.98
LRRC28-221ENST00000561276 LOC100509620A0A075B734 347 aa8.91□□□□□ -0.98
LRRC28-221ENST00000561276 SYNGR3O43761 229 aa8.91□□□□□ -0.98
LRRC28-221ENST00000561276 DOK2O60496 412 aa8.91□□□□□ -0.98
LRRC28-221ENST00000561276 CTAG2O75638 210 aa8.91□□□□□ -0.98
LRRC28-221ENST00000561276 GOSR1O95249 250 aa8.91□□□□□ -0.98
LRRC28-221ENST00000561276 SBK2P0C263 348 aa8.91□□□□□ -0.98
LRRC28-221ENST00000561276 ZNF35P13682 527 aa8.91□□□□□ -0.98
LRRC28-221ENST00000561276 CCNOP22674 350 aa8.91□□□□□ -0.98
LRRC28-221ENST00000561276 CALCRP30988 508 aa8.91□□□□□ -0.98
LRRC28-221ENST00000561276 APLNRP35414 380 aa8.91□□□□□ -0.98
LRRC28-221ENST00000561276 MTNR1AP48039 350 aa8.91□□□□□ -0.98
LRRC28-221ENST00000561276 HSPA13P48723 471 aa8.91□□□□□ -0.98
LRRC28-221ENST00000561276 NR1H2P55055 460 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms