RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235		E7ESA3	106 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	CHMP2A	O43633	222 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	OR10H3	O60404	316 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	LYPD3	O95274	346 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	IFNA16	P05015	189 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	RNH1	P13489	461 aa	Known RBP	3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	ZNF19	P17023	458 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	SLC11A1	P49279	550 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	DAP3	P51398	398 aa	Known RBP	3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	BID	P55957	195 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	CLDN8	P56748	225 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	RIPPLY3	P57055	190 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	RPS14	P62263	151 aa	Known RBP	3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	GANAB	Q14697	944 aa	Known RBP	3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	METTL21C	Q5VZV1	264 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	OR52E8	Q6IFG1	317 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	RWDD4	Q6NW29	188 aa	Known RBP	3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	C4orf22	Q6V702	233 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	UTS2B	Q765I0	119 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	TMEM179B	Q7Z7N9	219 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	PPP1R27	Q86WC6	154 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	TGIF2LY	Q8IUE0	185 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	SLC35F2	Q8IXU6	374 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	KATNAL2	Q8IYT4	538 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	OR2L13	Q8N349	312 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	SVOPL	Q8N434	492 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	C14orf178	Q8N769	122 aa	Predicted RBP	3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	KCNG3	Q8TAE7	436 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	LHFPL5	Q8TAF8	219 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	SCFD1	Q8WVM8	642 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	TCTEX1D2	Q8WW35	142 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	MARC2	Q969Z3	335 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	MAGEB18	Q96M61	343 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	PLEKHF1	Q96S99	279 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	KLHDC3	Q9BQ90	382 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	ZNF670	Q9BS34	389 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	TUBGCP2	Q9BSJ2	902 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	LRRN3	Q9H3W5	708 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	TMEM185B	Q9H7F4	350 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	NUDT15	Q9NV35	164 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	SMOX	Q9NWM0	555 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	POLDIP2	Q9Y2S7	368 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	PLXNA3	P51805	1871 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	ADAMTS9	Q9P2N4	1935 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	USP24	Q9UPU5	2620 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	MYH11	P35749	1972 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	CCL15-CCL14	A0A0B4J2E2	113 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235		A0A0J9YYE9	177 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235		A0A1B0GUS0	222 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	TMEM210	A6NLX4	147 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	SUPT3H	B4E1H0	165 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235		C9JVG2	144 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235		H3BQF6	201 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235		K7ERQ8	282 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	SLC9A3R1	O14745	358 aa	Predicted RBP	3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	POLR1C	O15160	346 aa	Predicted RBP	3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	RNF13	O43567	381 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	DENR	O43583	198 aa	Known RBP	3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	CXCL13	O43927	109 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	LYPLA2	O95372	231 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	LALBA	P00709	142 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	TIMP1	P01033	207 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	TRBC1	P01850	177 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	CRYGC	P07315	174 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	RBMY1C	P0DJD4	496 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	CD1E	P15812	388 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	NCK1	P16333	377 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	IMPDH1	P20839	514 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	MSR1	P21757	451 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	F8A1	P23610	371 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	GCA	P28676	217 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	PCK1	P35558	622 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	RGR	P47804	291 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	YWHAG	P61981	247 aa	Known RBP eCLIP	3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	RPS15	P62841	145 aa	Known RBP	3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	RPL10A	P62906	217 aa	Known RBP	3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	ELF3	P78545	371 aa	Predicted RBP	3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	CHRNB3	Q05901	458 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	NAB1	Q13506	487 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	CCL15	Q16663	113 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	TEX30	Q5JUR7	227 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	SAPCD1	Q5SSQ6	148 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	BEND3	Q5T5X7	828 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	NIPAL1	Q6NVV3	410 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	TRMT10C	Q7L0Y3	403 aa	Known RBP	3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	ARC	Q7LC44	396 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	FAM220A	Q7Z4H9	259 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	LUZP2	Q86TE4	346 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	NUDCD3	Q8IVD9	361 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	CDKL3	Q8IVW4	592 aa	Predicted RBP	3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	OFCC1	Q8IZS5	231 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	IQCK	Q8N0W5	287 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	CSGALNACT2	Q8N6G5	542 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	ALLC	Q8N6M5	410 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	CCNYL1	Q8N7R7	359 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	TTC29	Q8NA56	475 aa	Predicted RBP	3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	ZNF461	Q8TAF7	563 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	SETD7	Q8WTS6	366 aa	Known RBP	3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	PYROXD1	Q8WU10	500 aa		3.84	□□□□□ -1.79
TCF12-223	ENST00000561235	MITD1	Q8WV92	249 aa		3.84	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms