RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 UCP2P55851 309 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 ERVFC1-1P60608 527 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 GLO1Q04760 184 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 TRAF3Q13114 568 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 PDE7AQ13946 482 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 HEPACAMQ14CZ8 416 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 GSG1Q2KHT4 349 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 ARHGAP11BQ3KRB8 267 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 PHYHD1Q5SRE7 291 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 WDR25Q64LD2 544 aaPredicted RBP2.98□□□□□ -1.93
HERC1-211ENST00000560983 NIPAL3Q6P499 406 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 TMEM88Q6PEY1 159 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 UNQ9370/PRO34162Q6UXP9 181 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 ISCA2Q86U28 154 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 ZC3HC1Q86WB0 502 aaKnown RBP2.98□□□□□ -1.93
HERC1-211ENST00000560983 CADM3Q8N126 398 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 ZNF614Q8N883 585 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 SCAIQ8N9R8 606 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 OR5R1Q8NH85 324 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 RFWD2Q8NHY2 731 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 C8orf46Q8TAG6 207 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 FGFBP3Q8TAT2 258 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 C11orf40Q8WZ69 217 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 ST8SIA1Q92185 356 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 UBXN10Q96LJ8 280 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 C3orf30Q96M34 536 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 AMDHD1Q96NU7 426 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 FRG2BQ96QU4 278 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 TMEM246Q9BRR3 403 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 NAA11Q9BSU3 229 aaPredicted RBP2.98□□□□□ -1.93
HERC1-211ENST00000560983 EGLN1Q9GZT9 426 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 EQTNQ9NQ60 294 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 FARSBQ9NSD9 589 aaKnown RBP2.98□□□□□ -1.93
HERC1-211ENST00000560983 DDX18Q9NVP1 670 aaKnown RBP2.98□□□□□ -1.93
HERC1-211ENST00000560983 GIN1Q9NXP7 522 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 TAS2R7Q9NYW3 318 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 MRPL15Q9P015 296 aaKnown RBP2.98□□□□□ -1.93
HERC1-211ENST00000560983 SENP1Q9P0U3 644 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 OPTCQ9UBM4 332 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 ZMAT5Q9UDW3 170 aaKnown RBP2.98□□□□□ -1.93
HERC1-211ENST00000560983 MIOXQ9UGB7 285 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 CHRNA9Q9UGM1 479 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 PACSIN2Q9UNF0 486 aaPredicted RBP2.98□□□□□ -1.93
HERC1-211ENST00000560983 FAM96BQ9Y3D0 163 aa2.98□□□□□ -1.93
HERC1-211ENST00000560983 A0A1B0GVY2 172 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 BTBD17A6NE02 478 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 ZNF99A8MXY4 864 aaPredicted RBP2.97□□□□□ -1.93
HERC1-211ENST00000560983 UBXN8O00124 270 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 ZNF264O43296 627 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 SLC25A17O43808 307 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 CHST1O43916 411 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 BCAS1O75363 584 aaPredicted RBP2.97□□□□□ -1.93
HERC1-211ENST00000560983 MFN2O95140 757 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 AKR7A3O95154 331 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 THY1P04216 161 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 LIPFP07098 398 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 FBP1P09467 338 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 IFI6P09912 130 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 PRPS2P11908 318 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 RPS2P15880 293 aaKnown RBP2.97□□□□□ -1.93
HERC1-211ENST00000560983 PGAM1P18669 254 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 CCNA2P20248 432 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 FKBP2P26885 142 aaKnown RBP2.97□□□□□ -1.93
HERC1-211ENST00000560983 ATP12AP54707 1039 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 AQP5P55064 265 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 ATP6V0D1P61421 351 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 ARF6P62330 175 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 DLG1Q12959 904 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 TBX2Q13207 712 aaPredicted RBP2.97□□□□□ -1.93
HERC1-211ENST00000560983 SKP2Q13309 424 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 RASA2Q15283 850 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 LY6EQ16553 131 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 MOGQ16653 247 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 CEACAM16Q2WEN9 425 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 SGO1Q5FBB7 561 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 SPANXN3Q5MJ09 141 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 AP1ARQ63HQ0 302 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 LYPD2Q6UXB3 125 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 GPAT4Q86UL3 456 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 RNF130Q86XS8 419 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 MMGT1Q8N4V1 131 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 C1orf52Q8N6N3 182 aaKnown RBP2.97□□□□□ -1.93
HERC1-211ENST00000560983 CDRT4Q8N9R6 151 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 SCCPDHQ8NBX0 429 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 OR5AU1Q8NGC0 362 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 PIFOQ8TCI5 191 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 C16orf78Q8WTQ4 265 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 NPRL2Q8WTW4 380 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 TMEM234Q8WY98 164 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 NSMAFQ92636 917 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 OTUB1Q96FW1 271 aaPredicted RBP2.97□□□□□ -1.93
HERC1-211ENST00000560983 CERS2Q96G23 380 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 PLEKHA8Q96JA3 519 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 SAMD8Q96LT4 415 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 OR5M11Q96RB7 305 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 ARHGDIGQ99819 225 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 MCRIP2Q9BUT9 160 aaKnown RBP2.97□□□□□ -1.93
HERC1-211ENST00000560983 HOXD1Q9GZZ0 328 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 NAT10Q9H0A0 1025 aaKnown RBP2.97□□□□□ -1.93
HERC1-211ENST00000560983 OR51B6Q9H340 312 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms