RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 VASH1Q7L8A9 365 aaPredicted RBP13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 ALDH16A1Q8IZ83 802 aa13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 ZNF101Q8IZC7 436 aa13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 OR2T33Q8NG76 320 aa13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 COX4I2Q96KJ9 171 aa13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 BARX1Q9HBU1 254 aaPredicted RBP13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 MRPL22Q9NWU5 206 aaKnown RBP13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 MYEF2Q9P2K5 600 aaKnown RBP13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 ASH2LQ9UBL3 628 aa13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 AP4S1Q9Y587 144 aa13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 TLN2Q9Y4G6 2542 aa13.12□□□□□ -0.31
SNRPA1-213ENST00000560856 C5orf49A4QMS7 147 aa13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 OR6C6A6NF89 314 aa13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 H7C1Q1 480 aa13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 EBAG9O00559 213 aa13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 RER1O15258 196 aa13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 SGCEO43556 437 aa13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 SSX4O60224 188 aa13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 LY6HO94772 140 aa13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 F12P00748 615 aaPredicted RBP13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 BMP4P12644 408 aa13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 ZNF250P15622 560 aa13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 PYCR1P32322 319 aa13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 PPOXP50336 477 aa13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 GDI2P50395 445 aaKnown RBP13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 DAPP51397 102 aa13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 EFNA4P52798 201 aa13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 RPS23P62266 143 aaKnown RBP13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 TEKQ02763 1124 aa13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 CRMP1Q14194 572 aa13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 FAHD1Q6P587 224 aa13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 ZCCHC24Q8N2G6 241 aaKnown RBP13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 IQCF1Q8N6M8 205 aa13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 OR10H5Q8NGA6 315 aa13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 OR5K1Q8NHB7 308 aa13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 C18orf12Q96KH6 178 aa13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 BDH2Q9BUT1 245 aa13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 BCL2L14Q9BZR8 327 aa13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 OR51B6Q9H340 312 aa13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 CMC2Q9NRP2 79 aa13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 KLHL21Q9UJP4 597 aa13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 FZR1Q9UM11 496 aa13.11□□□□□ -0.31
SNRPA1-213ENST00000560856 IGLV3-9A0A075B6K5 115 aa13.1□□□□□ -0.31
SNRPA1-213ENST00000560856 DOK2O60496 412 aa13.1□□□□□ -0.31
SNRPA1-213ENST00000560856 CLPTM1O96005 669 aa13.1□□□□□ -0.31
SNRPA1-213ENST00000560856 NGFP01138 241 aa13.1□□□□□ -0.31
SNRPA1-213ENST00000560856 OSMP13725 252 aa13.1□□□□□ -0.31
SNRPA1-213ENST00000560856 CCNOP22674 350 aa13.1□□□□□ -0.31
SNRPA1-213ENST00000560856 GRK5P34947 590 aa13.1□□□□□ -0.31
SNRPA1-213ENST00000560856 GGT2P36268 569 aa13.1□□□□□ -0.31
SNRPA1-213ENST00000560856 RAD52P43351 418 aa13.1□□□□□ -0.31
SNRPA1-213ENST00000560856 CENPAP49450 140 aa13.1□□□□□ -0.31
SNRPA1-213ENST00000560856 SLC25A1P53007 311 aa13.1□□□□□ -0.31
SNRPA1-213ENST00000560856 ACTR3P61158 418 aa13.1□□□□□ -0.31
SNRPA1-213ENST00000560856 CDK5Q00535 292 aa13.1□□□□□ -0.31
SNRPA1-213ENST00000560856 GLO1Q04760 184 aa13.1□□□□□ -0.31
SNRPA1-213ENST00000560856 RSPO1Q2MKA7 263 aaPredicted RBP13.1□□□□□ -0.31
SNRPA1-213ENST00000560856 TMEM255AQ5JRV8 349 aa13.1□□□□□ -0.31
SNRPA1-213ENST00000560856 RGS7BPQ6MZT1 257 aaPredicted RBP13.1□□□□□ -0.31
SNRPA1-213ENST00000560856 RFPL4BQ6ZWI9 263 aa13.1□□□□□ -0.31
SNRPA1-213ENST00000560856 AMIGO2Q86SJ2 522 aa13.1□□□□□ -0.31
SNRPA1-213ENST00000560856 TEX47Q8TBZ9 253 aa13.1□□□□□ -0.31
SNRPA1-213ENST00000560856 LRTOMTQ8WZ04 291 aa13.1□□□□□ -0.31
SNRPA1-213ENST00000560856 SLC7A6Q92536 515 aa13.1□□□□□ -0.31
SNRPA1-213ENST00000560856 SYT3Q9BQG1 590 aa13.1□□□□□ -0.31
SNRPA1-213ENST00000560856 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.1□□□□□ -0.31
SNRPA1-213ENST00000560856 CYB5R1Q9UHQ9 305 aa13.1□□□□□ -0.31
SNRPA1-213ENST00000560856 FBXO9Q9UK97 447 aaPredicted RBP13.1□□□□□ -0.31
SNRPA1-213ENST00000560856 A0A096LNT2 108 aa13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 H3BN98 237 aa13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 CIB2O75838 187 aa13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 INHBBP09529 407 aa13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 PSKH1P11801 424 aa13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 HTR5AP47898 357 aa13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 NUDT6P53370 316 aa13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 CHD3Q12873 2000 aaKnown RBP13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 GINS1Q14691 196 aa13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 LINC01590Q5TEZ4 76 aa13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 SLC18B1Q6NT16 456 aa13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 CORO6Q6QEF8 472 aa13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 LYPD4Q6UWN0 246 aa13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 ZNF525Q8N782 197 aa13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 ATG16L2Q8NAA4 619 aa13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 GJC3Q8NFK1 279 aa13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 OR51L1Q8NGJ5 315 aa13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 OR9Q1Q8NGQ5 310 aa13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 OR1J1Q8NGS3 322 aa13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 OR2T4Q8NH00 348 aa13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 OR1F12Q8NHA8 337 aa13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 PTP4A1Q93096 173 aa13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 MARS2Q96GW9 593 aaKnown RBP13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 SMR3AQ99954 134 aa13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 VRK1Q99986 396 aaPredicted RBP13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 HCAR1Q9BXC0 346 aa13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 GSX1Q9H4S2 264 aaPredicted RBP13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 PLEK2Q9NYT0 353 aa13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 ATPIF1Q9UII2 106 aa13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 NDRG4Q9ULP0 352 aaKnown RBP13.09□□□□□ -0.31
SNRPA1-213ENST00000560856 IGHV4-30-2A0A087WSY4 118 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms