RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 FSD1LQ9BXM9 530 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 DPEP2Q9H4A9 486 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 ACKR4Q9NPB9 350 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 LHX9Q9NQ69 397 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 SIRT7Q9NRC8 400 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 UQCC1Q9NVA1 299 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 ASF1BQ9NVP2 202 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 ANKRD10Q9NXR5 420 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 FOXJ3Q9UPW0 622 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 FOXA2Q9Y261 457 aaPredicted RBP6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 TDRD15B5MCY1 1934 aaKnown RBP6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 TSC2P49815 1807 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 A0A0D9SG52 128 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 A0A1W2PPK0 400 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 UBE2QL1A1L167 161 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 MYADML2A6NDP7 307 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 IFITM10A6NMD0 228 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 HEPACAM2A8MVW5 462 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 LRRN3E7EW58 273 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 H7C1Q1 480 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 RDH16O75452 317 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 CBR3O75828 277 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 SP9P0CG40 484 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 C1GALT1C1LP0DN25 315 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 ITPKBP27987 946 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 KIR3DL2P43630 455 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 OR3A1P47881 315 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 CCL11P51671 97 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 HMGA2P52926 109 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 TPI1P60174 286 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 LSM6P62312 80 aaKnown RBP6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 SELENOWP63302 87 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 CFHR1Q03591 330 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 GLO1Q04760 184 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 SFRP4Q6FHJ7 346 aaPredicted RBP6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 TMEM86AQ8N2M4 240 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 HAVCR2Q8TDQ0 301 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 THEM6Q8WUY1 208 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 MED8Q96G25 268 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 TMED9Q9BVK6 235 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 TM6SF2Q9BZW4 377 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 LRRN3Q9H3W5 708 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 GOLGA2P5Q9HBQ8 144 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 IL23AQ9NPF7 189 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 TMEM138Q9NPI0 162 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 ASCL3Q9NQ33 180 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 MIEF1Q9NQG6 463 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 ST3GAL5Q9UNP4 418 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 BPTFQ12830 3046 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 ANHXE9PGG2 379 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 F5H5P2 479 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 HCRTO43612 131 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 FADS1O60427 444 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 C1QCP02747 245 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 BCKDHAP12694 445 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 CTGFP29279 349 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 SHC1P29353 583 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 OTX2P32243 289 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 MNDAP41218 407 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 ATP5J2P56134 94 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 H2BFSP57053 126 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 WDR5P61964 334 aaKnown RBP6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 SLC7A9P82251 487 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 SRSF3P84103 164 aaKnown RBP6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 SURF2Q15527 256 aaPredicted RBP6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 PCK2Q16822 640 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 RNASE12Q5GAN4 147 aaKnown RBP6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 RNASE10Q5GAN6 216 aaKnown RBP6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 TMEM244Q5VVB8 128 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 RAET1LQ5VY80 246 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 DPPA4Q7L190 304 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 WDR53Q7Z5U6 358 aaPredicted RBP6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 BCDIN3DQ7Z5W3 292 aaKnown RBP6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 ANGPTL5Q86XS5 388 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 VRK2Q86Y07 508 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 DEFB106AQ8N104 65 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 ZFP41Q8N8Y5 198 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 OR4K14Q8NGD5 310 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 OR2G2Q8NGZ5 317 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 MALSU1Q96EH3 234 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 SLC41A3Q96GZ6 507 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 UTP23Q9BRU9 249 aaKnown RBP6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 THSD1Q9NS62 852 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 ACER3Q9NUN7 267 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 ASB6Q9NWX5 421 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 GAR1Q9NY12 217 aaKnown RBP6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 GOLT1BQ9Y3E0 138 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 TMED3Q9Y3Q3 217 aa6.04□□□□□ -1.44
TSPAN3-209ENST00000560715 IRGMA1A4Y4 181 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 NPEPPSL1A6NEC2 478 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 NAP1L6A6NFF2 107 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 KIAA1324LA8MWY0 1029 aaPredicted RBP6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 PRYO14603 147 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 OR10H2O60403 315 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 F13BP05160 661 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 LINC00614P0C842 121 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 SRMP19623 302 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 RAB5AP20339 215 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 TBXA2RP21731 343 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 FEN1P39748 380 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms