RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 JMJD8Q96S16 334 aa10.42□□□□□ -0.74
SPG11-219ENST00000559822 KCTD14Q9BQ13 255 aaPredicted RBP10.42□□□□□ -0.74
SPG11-219ENST00000559822 NMNAT1Q9HAN9 279 aaPredicted RBP10.42□□□□□ -0.74
SPG11-219ENST00000559822 G6PC2Q9NQR9 355 aa10.42□□□□□ -0.74
SPG11-219ENST00000559822 TBCCD1Q9NVR7 557 aa10.42□□□□□ -0.74
SPG11-219ENST00000559822 ENPP4Q9Y6X5 453 aa10.42□□□□□ -0.74
SPG11-219ENST00000559822 TEX13CA0A0J9YWL9 993 aa10.41□□□□□ -0.74
SPG11-219ENST00000559822 ISPDA4D126 451 aa10.41□□□□□ -0.74
SPG11-219ENST00000559822 PRSS37A4D1T9 235 aa10.41□□□□□ -0.74
SPG11-219ENST00000559822 ZSCAN5BA6NJL1 495 aa10.41□□□□□ -0.74
SPG11-219ENST00000559822 H7C1C5 153 aa10.41□□□□□ -0.74
SPG11-219ENST00000559822 J3QW42 95 aa10.41□□□□□ -0.74
SPG11-219ENST00000559822 SGCEO43556 437 aa10.41□□□□□ -0.74
SPG11-219ENST00000559822 PLPP2O43688 288 aa10.41□□□□□ -0.74
SPG11-219ENST00000559822 DEAF1O75398 565 aaPredicted RBP10.41□□□□□ -0.74
SPG11-219ENST00000559822 GMNNO75496 209 aa10.41□□□□□ -0.74
SPG11-219ENST00000559822 PRSS23O95084 383 aa10.41□□□□□ -0.74
SPG11-219ENST00000559822 NDUFB2O95178 105 aa10.41□□□□□ -0.74
SPG11-219ENST00000559822 H1F0P07305 194 aaKnown RBP10.41□□□□□ -0.74
SPG11-219ENST00000559822 TNFRSF1AP19438 455 aa10.41□□□□□ -0.74
SPG11-219ENST00000559822 SDHAP31040 664 aa10.41□□□□□ -0.74
SPG11-219ENST00000559822 HTR5AP47898 357 aa10.41□□□□□ -0.74
SPG11-219ENST00000559822 NUDT2P50583 147 aa10.41□□□□□ -0.74
SPG11-219ENST00000559822 LCN6P62502 163 aa10.41□□□□□ -0.74
SPG11-219ENST00000559822 TNFAIP6P98066 277 aaPredicted RBP10.41□□□□□ -0.74
SPG11-219ENST00000559822 AQP6Q13520 282 aa10.41□□□□□ -0.74
SPG11-219ENST00000559822 FHL1Q13642 323 aa10.41□□□□□ -0.74
SPG11-219ENST00000559822 DCAF12L2Q5VW00 463 aa10.41□□□□□ -0.74
SPG11-219ENST00000559822 C12orf54Q6X4T0 127 aa10.41□□□□□ -0.74
SPG11-219ENST00000559822 USP43Q70EL4 1123 aa10.41□□□□□ -0.74
SPG11-219ENST00000559822 CMTM5Q96DZ9 223 aa10.41□□□□□ -0.74
SPG11-219ENST00000559822 Q96M85 177 aa10.41□□□□□ -0.74
SPG11-219ENST00000559822 EMC7Q9NPA0 242 aa10.41□□□□□ -0.74
SPG11-219ENST00000559822 MED4Q9NPJ6 270 aa10.41□□□□□ -0.74
SPG11-219ENST00000559822 ADAM18Q9Y3Q7 739 aa10.41□□□□□ -0.74
SPG11-219ENST00000559822 CACNG2Q9Y698 323 aa10.41□□□□□ -0.74
SPG11-219ENST00000559822 A0A1W2PRQ8 180 aa10.4□□□□□ -0.74
SPG11-219ENST00000559822 CDC42EP2O14613 210 aa10.4□□□□□ -0.74
SPG11-219ENST00000559822 SURF4O15260 269 aa10.4□□□□□ -0.74
SPG11-219ENST00000559822 KHDRBS3O75525 346 aaKnown RBP10.4□□□□□ -0.74
SPG11-219ENST00000559822 UBOX5O94941 541 aa10.4□□□□□ -0.74
SPG11-219ENST00000559822 NGFP01138 241 aa10.4□□□□□ -0.74
SPG11-219ENST00000559822 RHCEP18577 417 aa10.4□□□□□ -0.74
SPG11-219ENST00000559822 EPHA1P21709 976 aa10.4□□□□□ -0.74
SPG11-219ENST00000559822 MDH1P40925 334 aaKnown RBP10.4□□□□□ -0.74
SPG11-219ENST00000559822 LSM6P62312 80 aaKnown RBP10.4□□□□□ -0.74
SPG11-219ENST00000559822 PSG7Q13046 419 aa10.4□□□□□ -0.74
SPG11-219ENST00000559822 KRR1Q13601 381 aaKnown RBP10.4□□□□□ -0.74
SPG11-219ENST00000559822 DGCR6Q14129 220 aa10.4□□□□□ -0.74
SPG11-219ENST00000559822 MESTQ5EB52 335 aa10.4□□□□□ -0.74
SPG11-219ENST00000559822 FGD3Q5JSP0 725 aa10.4□□□□□ -0.74
SPG11-219ENST00000559822 C8orf82Q6P1X6 216 aaPredicted RBP10.4□□□□□ -0.74
SPG11-219ENST00000559822 DNM1P34Q6PK57 102 aa10.4□□□□□ -0.74
SPG11-219ENST00000559822 TBPL2Q6SJ96 375 aa10.4□□□□□ -0.74
SPG11-219ENST00000559822 THSD4Q6ZMP0 1018 aa10.4□□□□□ -0.74
SPG11-219ENST00000559822 FAM122BQ7Z309 247 aa10.4□□□□□ -0.74
SPG11-219ENST00000559822 C1QL2Q7Z5L3 287 aa10.4□□□□□ -0.74
SPG11-219ENST00000559822 ADCK1Q86TW2 530 aa10.4□□□□□ -0.74
SPG11-219ENST00000559822 GLB1L2Q8IW92 636 aa10.4□□□□□ -0.74
SPG11-219ENST00000559822 NANPQ8TBE9 248 aa10.4□□□□□ -0.74
SPG11-219ENST00000559822 SLC7A13Q8TCU3 470 aa10.4□□□□□ -0.74
SPG11-219ENST00000559822 FAM46AQ96IP4 442 aaKnown RBP10.4□□□□□ -0.74
SPG11-219ENST00000559822 DCLRE1CQ96SD1 692 aaKnown RBP10.4□□□□□ -0.74
SPG11-219ENST00000559822 GPX7Q96SL4 187 aaPredicted RBP10.4□□□□□ -0.74
SPG11-219ENST00000559822 SUCNR1Q9BXA5 334 aa10.4□□□□□ -0.74
SPG11-219ENST00000559822 MSL2Q9HCI7 577 aa10.4□□□□□ -0.74
SPG11-219ENST00000559822 PLEK2Q9NYT0 353 aa10.4□□□□□ -0.74
SPG11-219ENST00000559822 GMPR2Q9P2T1 348 aaKnown RBP10.4□□□□□ -0.74
SPG11-219ENST00000559822 ATPIF1Q9UII2 106 aa10.4□□□□□ -0.74
SPG11-219ENST00000559822 KLHL21Q9UJP4 597 aa10.4□□□□□ -0.74
SPG11-219ENST00000559822 PCDHB10Q9UN67 800 aa10.4□□□□□ -0.74
SPG11-219ENST00000559822 SAMD4AQ9UPU9 718 aaKnown RBP10.4□□□□□ -0.74
SPG11-219ENST00000559822 AURKCQ9UQB9 309 aa10.4□□□□□ -0.74
SPG11-219ENST00000559822 LOC105371242A0A075B767 164 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 TRIM77I1YAP6 450 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 FOXH1O75593 365 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 VENTXO95231 258 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 CTLA4P16410 223 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 KITLGP21583 273 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 FUT4P22083 530 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 RGS6P49758 472 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 RPS6KA3P51812 740 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 ACTG1P63261 375 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 CDK5R2Q13319 367 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 KRT72Q14CN4 511 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 PGM2L1Q6PCE3 622 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 VASH1Q7L8A9 365 aaPredicted RBP10.39□□□□□ -0.75
SPG11-219ENST00000559822 KLHL36Q8N4N3 616 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 SPICQ8N5J4 248 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.39□□□□□ -0.75
SPG11-219ENST00000559822 SEMA6DQ8NFY4 1073 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 OR5L1Q8NGL2 311 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 RASD2Q96D21 266 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 RSRC1Q96IZ7 334 aaKnown RBP10.39□□□□□ -0.75
SPG11-219ENST00000559822 RBM4Q9BWF3 364 aaKnown RBP10.39□□□□□ -0.75
SPG11-219ENST00000559822 TMPRSS13Q9BYE2 586 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 SYT4Q9H2B2 425 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 RERGLQ9H628 205 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 SPAG4Q9NPE6 437 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 NRIP3Q9NQ35 241 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms