RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 CHRFAM7AQ494W8 412 aa2.92□□□□□ -1.94
CASC4-206ENST00000558847 TPTE2P1Q5T6R2 138 aa2.92□□□□□ -1.94
CASC4-206ENST00000558847 LINC01551Q86U37 167 aa2.92□□□□□ -1.94
CASC4-206ENST00000558847 STPG2Q8N412 459 aa2.92□□□□□ -1.94
CASC4-206ENST00000558847 NOXO1Q8NFA2 376 aa2.92□□□□□ -1.94
CASC4-206ENST00000558847 NUBPLQ8TB37 319 aa2.92□□□□□ -1.94
CASC4-206ENST00000558847 ANKRD60Q9BZ19 345 aa2.92□□□□□ -1.94
CASC4-206ENST00000558847 IL22Q9GZX6 179 aa2.92□□□□□ -1.94
CASC4-206ENST00000558847 BLZF1Q9H2G9 400 aa2.92□□□□□ -1.94
CASC4-206ENST00000558847 FANCEQ9HB96 536 aa2.92□□□□□ -1.94
CASC4-206ENST00000558847 ZC4H2Q9NQZ6 224 aa2.92□□□□□ -1.94
CASC4-206ENST00000558847 CLN6Q9NWW5 311 aa2.92□□□□□ -1.94
CASC4-206ENST00000558847 MRPS18BQ9Y676 258 aaKnown RBP2.92□□□□□ -1.94
CASC4-206ENST00000558847 WSB1Q9Y6I7 421 aa2.92□□□□□ -1.94
CASC4-206ENST00000558847 COL22A1Q8NFW1 1626 aaPredicted RBP2.92□□□□□ -1.94
CASC4-206ENST00000558847 WDR62O43379 1518 aa2.92□□□□□ -1.94
CASC4-206ENST00000558847 MAP3K15Q6ZN16 1313 aa2.92□□□□□ -1.94
CASC4-206ENST00000558847 ZNF646O15015 1829 aaPredicted RBP2.91□□□□□ -1.94
CASC4-206ENST00000558847 INS-IGF2F8WCM5 200 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 H0YHG0 523 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 PANO1I0J062 215 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 GNAO1P09471 354 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 UBCP0CG48 685 aaKnown RBP2.91□□□□□ -1.94
CASC4-206ENST00000558847 OR5H8P0DN80 308 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 PRKACAP17612 351 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 MAS1LP35410 378 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 CDKN2BP42772 138 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 RPS5P46782 204 aaKnown RBP2.91□□□□□ -1.94
CASC4-206ENST00000558847 CRISP1P54107 249 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 CRISP3P54108 245 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 RAB11AP62491 216 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 DNAJC3Q13217 504 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 GGTLC2Q14390 218 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 RAB11BQ15907 218 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 ZNF726P1Q15940 193 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 POU2AF1Q16633 256 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 PTPN20Q4JDL3 420 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 TSPO2Q5TGU0 170 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 MBOAT2Q6ZWT7 520 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 APH1BQ8WW43 257 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 TMEM158Q8WZ71 300 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 LRRC58Q96CX6 371 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 BMFQ96LC9 184 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 WFIKKN1Q96NZ8 548 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 SLC17A9Q9BYT1 436 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 NEUROG2Q9H2A3 272 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 PIGUQ9H490 435 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 RPRD1BQ9NQG5 326 aaKnown RBP2.91□□□□□ -1.94
CASC4-206ENST00000558847 MYEF2Q9P2K5 600 aaKnown RBP2.91□□□□□ -1.94
CASC4-206ENST00000558847 CTSFQ9UBX1 484 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 ST3GAL6Q9Y274 331 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 MEGF6O75095 1541 aa2.91□□□□□ -1.94
CASC4-206ENST00000558847 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.9□□□□□ -1.95
CASC4-206ENST00000558847 TMEM120BA0PK00 339 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 TSPAN11A1L157 253 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 OR6C74A6NCV1 312 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 CHMP2AO43633 222 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 AIREO43918 545 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 SPAG7O75391 227 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 FCN3O75636 299 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 CLTAP09496 248 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 ERGP11308 486 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 GGT1P19440 569 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 OR1E1P30953 314 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 LONP1P36776 959 aaKnown RBP2.9□□□□□ -1.95
CASC4-206ENST00000558847 ZNF136P52737 540 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 DOC2AQ14183 400 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 HADHQ16836 314 aaKnown RBP2.9□□□□□ -1.95
CASC4-206ENST00000558847 SPECC1LQ69YQ0 1117 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 OR52W1Q6IF63 320 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 ZNF530Q6P9A1 599 aaPredicted RBP2.9□□□□□ -1.95
CASC4-206ENST00000558847 NPSR1Q6W5P4 371 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 CBR4Q8N4T8 237 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 INO80EQ8NBZ0 244 aaPredicted RBP2.9□□□□□ -1.95
CASC4-206ENST00000558847 CHST4Q8NCG5 386 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 OR6Q1Q8NGQ2 317 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 ABHD3Q8WU67 409 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 ZNF414Q96IQ9 312 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 CALN1Q9BXU9 219 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 RGCCQ9H4X1 137 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 RPP21Q9H633 154 aaKnown RBP2.9□□□□□ -1.95
CASC4-206ENST00000558847 TMEM38AQ9H6F2 299 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 NOX3Q9HBY0 568 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 MRM3Q9HC36 420 aaKnown RBP2.9□□□□□ -1.95
CASC4-206ENST00000558847 RETNQ9HD89 108 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 TMEM9BQ9NQ34 198 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 LHX9Q9NQ69 397 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 PXMP2Q9NR77 195 aa2.9□□□□□ -1.95
CASC4-206ENST00000558847 TDRD6O60522 2096 aaKnown RBP2.89□□□□□ -1.95
CASC4-206ENST00000558847 XRCC2O43543 280 aa2.89□□□□□ -1.95
CASC4-206ENST00000558847 ANGPTL7O43827 346 aa2.89□□□□□ -1.95
CASC4-206ENST00000558847 HSBP1O75506 76 aa2.89□□□□□ -1.95
CASC4-206ENST00000558847 GABARAPO95166 117 aa2.89□□□□□ -1.95
CASC4-206ENST00000558847 HPRT1P00492 218 aa2.89□□□□□ -1.95
CASC4-206ENST00000558847 IFNW1P05000 195 aa2.89□□□□□ -1.95
CASC4-206ENST00000558847 RAB3AP20336 220 aa2.89□□□□□ -1.95
CASC4-206ENST00000558847 U2AF2P26368 475 aaKnown RBP eCLIP2.89□□□□□ -1.95
CASC4-206ENST00000558847 CEACAM3P40198 252 aa2.89□□□□□ -1.95
CASC4-206ENST00000558847 PEX19P40855 299 aa2.89□□□□□ -1.95
CASC4-206ENST00000558847 CSNK1A1P48729 337 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms