RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 B3GNTL1Q67FW5 361 aaPredicted RBP9.46□□□□□ -0.89
CUX1-217ENST00000558836 C5orf46Q6UWT4 87 aa9.46□□□□□ -0.89
CUX1-217ENST00000558836 CFAP77Q6ZQR2 320 aa9.46□□□□□ -0.89
CUX1-217ENST00000558836 JAGN1Q8N5M9 183 aa9.46□□□□□ -0.89
CUX1-217ENST00000558836 TMEM156Q8N614 296 aa9.46□□□□□ -0.89
CUX1-217ENST00000558836 RHBDD1Q8TEB9 315 aa9.46□□□□□ -0.89
CUX1-217ENST00000558836 IMMP1LQ96LU5 166 aa9.46□□□□□ -0.89
CUX1-217ENST00000558836 RBP7Q96R05 134 aa9.46□□□□□ -0.89
CUX1-217ENST00000558836 ARRDC1-AS1Q9H2J1 176 aa9.46□□□□□ -0.89
CUX1-217ENST00000558836 G6PC2Q9NQR9 355 aa9.46□□□□□ -0.89
CUX1-217ENST00000558836 OR52A1Q9UKL2 312 aa9.46□□□□□ -0.89
CUX1-217ENST00000558836 POLR1DQ9Y2S0 133 aa9.46□□□□□ -0.89
CUX1-217ENST00000558836 MRPS18BQ9Y676 258 aaKnown RBP9.46□□□□□ -0.89
CUX1-217ENST00000558836 BOD1L1Q8NFC6 3051 aa9.46□□□□□ -0.89
CUX1-217ENST00000558836 MYO7BQ6PIF6 2116 aa9.46□□□□□ -0.9
CUX1-217ENST00000558836 TRAV18A0A075B6X5 111 aa9.46□□□□□ -0.9
CUX1-217ENST00000558836 A0A1W2PQ72 361 aa9.46□□□□□ -0.9
CUX1-217ENST00000558836 C9J4A7 227 aa9.46□□□□□ -0.9
CUX1-217ENST00000558836 GABARAPH6UMI1 98 aa9.46□□□□□ -0.9
CUX1-217ENST00000558836 SULT2B1O00204 365 aa9.46□□□□□ -0.9
CUX1-217ENST00000558836 FABP7O15540 132 aa9.46□□□□□ -0.9
CUX1-217ENST00000558836 RAF1P04049 648 aa9.46□□□□□ -0.9
CUX1-217ENST00000558836 H2AFB2P0C5Z0 115 aa9.46□□□□□ -0.9
CUX1-217ENST00000558836 PTGS2P35354 604 aa9.46□□□□□ -0.9
CUX1-217ENST00000558836 VEGFCP49767 419 aa9.46□□□□□ -0.9
CUX1-217ENST00000558836 BLVRAP53004 296 aa9.46□□□□□ -0.9
CUX1-217ENST00000558836 FAPQ12884 760 aa9.46□□□□□ -0.9
CUX1-217ENST00000558836 MFSD13AQ14CX5 517 aa9.46□□□□□ -0.9
CUX1-217ENST00000558836 RSPO4Q2I0M5 234 aaPredicted RBP9.46□□□□□ -0.9
CUX1-217ENST00000558836 GFOD2Q3B7J2 385 aa9.46□□□□□ -0.9
CUX1-217ENST00000558836 RAET1LQ5VY80 246 aa9.46□□□□□ -0.9
CUX1-217ENST00000558836 OR10H5Q8NGA6 315 aa9.46□□□□□ -0.9
CUX1-217ENST00000558836 OR4D10Q8NGI6 311 aa9.46□□□□□ -0.9
CUX1-217ENST00000558836 OR8S1Q8NH09 359 aa9.46□□□□□ -0.9
CUX1-217ENST00000558836 NKD1Q969G9 470 aa9.46□□□□□ -0.9
CUX1-217ENST00000558836 FAM3DQ96BQ1 224 aa9.46□□□□□ -0.9
CUX1-217ENST00000558836 SLAMF6Q96DU3 332 aa9.46□□□□□ -0.9
CUX1-217ENST00000558836 GHITMQ9H3K2 345 aa9.46□□□□□ -0.9
CUX1-217ENST00000558836 PTGES2Q9H7Z7 377 aa9.46□□□□□ -0.9
CUX1-217ENST00000558836 R4GMQ9 66 aa9.46□□□□□ -0.9
CUX1-217ENST00000558836 SPENQ96T58 3664 aaKnown RBP9.46□□□□□ -0.9
CUX1-217ENST00000558836 NSG1A0A0A6YYJ2 146 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 ZNF432O94892 652 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 CALCBP10092 127 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 DNASE1L1P49184 302 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 P2RY4P51582 365 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 GSG1Q2KHT4 349 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 LUZP2Q86TE4 346 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 OR10S1Q8NGN2 331 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 RNF138Q8WVD3 245 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 DVL3Q92997 716 aaPredicted RBP9.45□□□□□ -0.9
CUX1-217ENST00000558836 SCMH1Q96GD3 660 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 POTEKPQ9BYX7 375 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 C20orf85Q9H1P6 137 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 ATG5Q9H1Y0 275 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 OR51J1Q9H342 316 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 ASH2LQ9UBL3 628 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 CDV3Q9UKY7 258 aaKnown RBP9.45□□□□□ -0.9
CUX1-217ENST00000558836 NUBP2Q9Y5Y2 271 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 DOCK10Q96BY6 2186 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 CENPBD1B2RD01 187 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 TP53I11O14683 189 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 ARPC1BO15143 372 aaKnown RBP9.45□□□□□ -0.9
CUX1-217ENST00000558836 RER1O15258 196 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 GSTZ1O43708 216 aaPredicted RBP9.45□□□□□ -0.9
CUX1-217ENST00000558836 TSC22D2O75157 780 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 CTAG2O75638 210 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 ONECUT2O95948 504 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 ALDOBP05062 364 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 ZNF43P17038 809 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 CSRP1P21291 193 aaKnown RBP9.45□□□□□ -0.9
CUX1-217ENST00000558836 MSX1P28360 303 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 GNALP38405 381 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 GPR85P60893 370 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 SIGLEC14Q08ET2 396 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 DNM1P34Q6PK57 102 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 RNF144BQ7Z419 303 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 FGGYQ96C11 551 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 SPACA5Q96QH8 159 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 UCN2Q96RP3 112 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 MRPL13Q9BYD1 178 aaKnown RBP9.45□□□□□ -0.9
CUX1-217ENST00000558836 WDR54Q9H977 334 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 HSPB11Q9Y547 144 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 CNOT1A5YKK6 2376 aaKnown RBP9.45□□□□□ -0.9
CUX1-217ENST00000558836 A0A0G2JMM0 328 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 A0A1W2PPB8 328 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 A0A1W2PRS3 328 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 KIR3DP1A8MWS1 328 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 TRAF3IP2O43734 574 aaPredicted RBP9.45□□□□□ -0.9
CUX1-217ENST00000558836 SSNA1O43805 119 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 SRSF10O75494 262 aaKnown RBP9.45□□□□□ -0.9
CUX1-217ENST00000558836 TOXO94900 526 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 CD2P06729 351 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 GZMKP49863 264 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 BTG1P62324 171 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 GALK2Q01415 458 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 MAB21L1Q13394 359 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 RAB11BQ15907 218 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 FDX2Q6P4F2 183 aa9.45□□□□□ -0.9
CUX1-217ENST00000558836 NHLRC1Q6VVB1 395 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms