RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 YIPF5Q969M3 257 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 UBE2FQ969M7 185 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 NABP1Q96AH0 204 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 TMEM186Q96B77 213 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 RCN3Q96D15 328 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 NMD3Q96D46 503 aaKnown RBP6.88□□□□□ -1.31
TRAF3-205ENST00000558700 RAB39BQ96DA2 213 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 ELMOD3Q96FG2 381 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 TIMD4Q96H15 378 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 FNDC11Q9BVV2 318 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 RACGAP1Q9H0H5 632 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 SAP30LQ9HAJ7 183 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 UGT2A1Q9Y4X1 527 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 IGKV1D-43A0A0B4J1Z2 117 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 IGHV1-69-2A0A0G2JMI3 117 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 LOC100653049A0A140TA62 436 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 A0A1W2PPL8 197 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 PLSCR5A0PG75 271 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 C5orf49A4QMS7 147 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 EFCAB9A8MZ26 197 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 FAM157AC9JC47 383 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 NDUFAB1O14561 156 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 XKRYO14609 159 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 KRT34O76011 436 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 ZNF682O95780 498 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 IGHV3-13P01766 116 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 CST2P09228 141 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 GAAP10253 952 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 MSR1P21757 451 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 COL8A2P25067 703 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 CDAP32320 146 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 ZNF81P51508 661 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 CTXN1P60606 82 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 PPP1CBP62140 327 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 ERVK-25P63136 954 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 SELENOWP63302 87 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 CCL8P80075 99 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 SF3A3Q12874 501 aaKnown RBP eCLIP6.87□□□□□ -1.31
TRAF3-205ENST00000558700 SGCAQ16586 387 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 HFEQ30201 348 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 ZNF718Q3SXZ3 478 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 IFI44LQ53G44 452 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 HSP90B2PQ58FF3 399 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 FAM27BQ5VT28 67 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 SLC25A47Q6Q0C1 308 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 ARL9Q6T311 187 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 ZNF730Q6ZMV8 503 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 FOXL2NBQ6ZUU3 175 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 USP51Q70EK9 711 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 ZER1Q7Z7L7 766 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 OAFQ86UD1 273 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 IGFN1Q86VF2 1251 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 CYP4Z1Q86W10 505 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 NRMQ8IXM6 262 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 POU5F2Q8N7G0 328 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 NPEPL1Q8NDH3 523 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 RP9Q8TA86 221 aaKnown RBP6.87□□□□□ -1.31
TRAF3-205ENST00000558700 IPCEF1Q8WWN9 437 aaPredicted RBP6.87□□□□□ -1.31
TRAF3-205ENST00000558700 ACOT11Q8WXI4 607 aaPredicted RBP6.87□□□□□ -1.31
TRAF3-205ENST00000558700 POM121L2Q96KW2 1035 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 TSPAN32Q96QS1 320 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 RBP7Q96R05 134 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 OR2H1Q9GZK4 316 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 CCDC134Q9H6E4 229 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 ZNF665Q9H7R5 613 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 ELOVL3Q9HB03 270 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 LPAR2Q9HBW0 351 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 SMURF1Q9HCE7 757 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 CYSLTR2Q9NS75 346 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 DECR2Q9NUI1 292 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 HIF1ANQ9NWT6 349 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 TREM2Q9NZC2 230 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 FBXL7Q9UJT9 491 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 NDRG4Q9ULP0 352 aaKnown RBP6.87□□□□□ -1.31
TRAF3-205ENST00000558700 A4GNTQ9UNA3 340 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 TMEM5Q9Y2B1 443 aa6.87□□□□□ -1.31
TRAF3-205ENST00000558700 TRAV27A0A087WT01 109 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 A0A0A6YYJ9 748 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 C12orf71A8MTZ7 269 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 CXCR6O00574 342 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 CDC14BO60729 498 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 CCDC22O60826 627 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 PNPP00491 289 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 ADH4P08319 380 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 COX4I1P13073 169 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 ANPEPP15144 967 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 ITGA2P17301 1181 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 LAP3P28838 519 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 RPL4P36578 427 aaKnown RBP6.86□□□□□ -1.31
TRAF3-205ENST00000558700 LIPAP38571 399 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 WNT5AP41221 380 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 CRYBB2P43320 205 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 GPR4P46093 362 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 ARHGDIAP52565 204 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 SLC7A2P52569 658 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 PSG4Q00888 419 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 MVKQ03426 396 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 LIPEQ05469 1076 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 PRKCDQ05655 676 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 EGR3Q06889 387 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms