RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 CASP12Q6UXS9 341 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 SLC46A3Q7Z3Q1 461 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 IGFN1Q86VF2 1251 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 ZCCHC24Q8N2G6 241 aaKnown RBP3.67□□□□□ -1.82
SPG11-211ENST00000558561 UBE2J2Q8N2K1 259 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 SLC43A2Q8N370 569 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 KBTBD8Q8NFY9 601 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 MFSD8Q8NHS3 518 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 BCL2L2Q92843 193 aaPredicted RBP3.67□□□□□ -1.82
SPG11-211ENST00000558561 DDIT4LQ96D03 193 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 RNFT2Q96EX2 444 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 SLC41A3Q96GZ6 507 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 OXGR1Q96P68 337 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 TNFRSF13CQ96RJ3 184 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 ZNF607Q96SK3 696 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 CDRT15Q96T59 188 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 TMEM204Q9BSN7 226 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 NAA11Q9BSU3 229 aaPredicted RBP3.67□□□□□ -1.82
SPG11-211ENST00000558561 CADM1Q9BY67 442 aaKnown RBP3.67□□□□□ -1.82
SPG11-211ENST00000558561 TMEM27Q9HBJ8 222 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 TIGARQ9NQ88 270 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 UPB1Q9UBR1 384 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 CD300AQ9UGN4 299 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 NDRG3Q9UGV2 375 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 ZNF346Q9UL40 294 aaKnown RBP3.67□□□□□ -1.82
SPG11-211ENST00000558561 SLC25A15Q9Y619 301 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 V9GYQ6 96 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 CSPG4Q6UVK1 2322 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 CR1P17927 2039 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 ANK3Q12955 4377 aaKnown RBP3.66□□□□□ -1.82
SPG11-211ENST00000558561 TRAV36DV7A0A075B6V5 113 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 A0A087WUU8 490 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 TMEM272A0A1B0GTI8 110 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 CIB4A0PJX0 185 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 TMEM247A6NEH6 219 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 TRIM64A6NGJ6 449 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 TRIM64BA6NI03 449 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 SAC3D1A6NKF1 404 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 GJE1A6NN92 205 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 FAM220BPB1ANY3 271 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 BLOC1S5-TXNDC5H3BN57 136 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 hCG_2039718K7EN88 272 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 M0R1B8 84 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 M0R3G1 203 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 CDC42EP2O14613 210 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 CLOCKO15516 846 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 SERPINB7O75635 380 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 AHSA1O95433 338 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 ZNF682O95780 498 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 SERPINA1P01009 418 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 HLA-DQA2P01906 255 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 MT-ND1P03886 318 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 GPIP06744 558 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 FGF2P09038 288 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 DANCRP0C864 163 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 ADORA3P0DMS8 318 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 CCL2P13500 99 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 COX5AP20674 150 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 PPIBP23284 216 aaKnown RBP3.66□□□□□ -1.82
SPG11-211ENST00000558561 AHCYP23526 432 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 IL32P24001 234 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 CALCRP30988 508 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 MAGEA8P43361 318 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 MTNR1AP48039 350 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 ERFP50548 548 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 NUDT2P50583 147 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 FXYD6P3P58550 94 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 CSNK2A1P68400 391 aaPredicted RBP3.66□□□□□ -1.82
SPG11-211ENST00000558561 VLDLRP98155 873 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 SORDQ00796 357 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 RBBP4Q09028 425 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 PMS2P3Q13401 168 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 GNA13Q14344 377 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 IL13RA2Q14627 380 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 P2RY6Q15077 328 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 ZNF74Q16587 644 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 CEACAM16Q2WEN9 425 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 ADAM5Q6NVV9 412 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 ULK3Q6PHR2 472 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 TTC33Q6PID6 262 aaPredicted RBP3.66□□□□□ -1.82
SPG11-211ENST00000558561 C6orf89Q6UWU4 347 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 ZNF704Q6ZNC4 412 aaPredicted RBP3.66□□□□□ -1.82
SPG11-211ENST00000558561 Q6ZT83 130 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 H1FNTQ75WM6 255 aaPredicted RBP3.66□□□□□ -1.82
SPG11-211ENST00000558561 PATL1Q86TB9 770 aaKnown RBP3.66□□□□□ -1.82
SPG11-211ENST00000558561 ZNF440Q8IYI8 595 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 C10orf53Q8N6V4 93 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 SCAIQ8N9R8 606 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 LRRC75AQ8NAA5 344 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 OR2T12Q8NG77 320 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 OR8J3Q8NGG0 315 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 OR1K1Q8NGR3 316 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 OR51A7Q8NH64 312 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 SLC26A7Q8TE54 656 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 APH1AQ96BI3 265 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 SLC47A1Q96FL8 570 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 PERPQ96FX8 193 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 C7orf34Q96L11 122 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 ZNF48Q96MX3 618 aaPredicted RBP3.66□□□□□ -1.82
SPG11-211ENST00000558561 ZNF75AQ96N20 296 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms