RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 SGCEO43556 437 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 ICMTO60725 284 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 NDUFS7O75251 213 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 FKBP6O75344 327 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 DEAF1O75398 565 aaPredicted RBP7.3□□□□□ -1.24
TPM1-213ENST00000558400 IFNGP01579 166 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 MT-ND5P03915 603 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 LCKP06239 509 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 ZNF250P15622 560 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 SLC25A16P16260 332 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 CCNOP22674 350 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 GCH1P30793 250 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 LIPAP38571 399 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 BLVRAP53004 296 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 LCN6P62502 163 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 ENDOGQ14249 297 aaKnown RBP7.3□□□□□ -1.24
TPM1-213ENST00000558400 CCDC121Q6ZUS5 278 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 CXXC5Q7LFL8 322 aaKnown RBP7.3□□□□□ -1.24
TPM1-213ENST00000558400 OR6V1Q8N148 313 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 SVOPLQ8N434 492 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 NPEPL1Q8NDH3 523 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 OR2T33Q8NG76 320 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 OR9Q2Q8NGE9 314 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 OR52E2Q8NGJ4 325 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 OR2T4Q8NH00 348 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 AKR7LQ8NHP1 331 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 SYNPRQ8TBG9 265 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 DNAJC9Q8WXX5 260 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 FAM168AQ92567 244 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 C4orf45Q96LM5 186 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 DCLRE1CQ96SD1 692 aaKnown RBP7.3□□□□□ -1.24
TPM1-213ENST00000558400 FEVQ99581 238 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 TSSK6Q9BXA6 273 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 WNT5BQ9H1J7 359 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 DYNLRB1Q9NP97 96 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 TBCCD1Q9NVR7 557 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 PLEK2Q9NYT0 353 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 PDP1Q9P0J1 537 aaPredicted RBP7.3□□□□□ -1.24
TPM1-213ENST00000558400 ATPIF1Q9UII2 106 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 DUSP13Q9UII6 198 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 KCNG2Q9UJ96 466 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 KLHL21Q9UJP4 597 aa7.3□□□□□ -1.24
TPM1-213ENST00000558400 STAB1Q9NY15 2570 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 IGLV3-9A0A075B6K5 115 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 LOC100509620A0A075B734 347 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 IGLV1-36A0A0B4J1U3 117 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 OR6C68A6NDL8 312 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 TRIM64A6NGJ6 449 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 TRIM64BA6NI03 449 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 J3QW42 95 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 EBAG9O00559 213 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 GPRIN2O60269 458 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 CIB2O75838 187 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 HLA-DQA2P01906 255 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 HMGN1P05114 100 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 ADRA2AP08913 450 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 FAM157BP0CG42 384 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 CCL2P13500 99 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 ZNF823P16415 610 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 PDLIM4P50479 330 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 KLF3P57682 345 aaPredicted RBP7.29□□□□□ -1.24
TPM1-213ENST00000558400 TEKQ02763 1124 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.29□□□□□ -1.24
TPM1-213ENST00000558400 PPP1R8Q12972 351 aaKnown RBP7.29□□□□□ -1.24
TPM1-213ENST00000558400 ECH1Q13011 328 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 FAM209AQ5JX71 171 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 CLEC12AQ5QGZ9 265 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 SLC35F1Q5T1Q4 408 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 C1orf146Q5VVC0 180 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 ZNF774Q6NX45 483 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 UGT2A3Q6UWM9 527 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 CLEC9AQ6UXN8 241 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 OR5L1Q8NGL2 311 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 OR1J1Q8NGS3 322 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 OR2AJ1Q8NGZ0 328 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 TEX47Q8TBZ9 253 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 SNX33Q8WV41 574 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 HTRA1Q92743 480 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 DDOQ99489 341 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 MRPL37Q9BZE1 423 aaKnown RBP7.29□□□□□ -1.24
TPM1-213ENST00000558400 EGLN3Q9H6Z9 239 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 EMC7Q9NPA0 242 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 RPRD1BQ9NQG5 326 aaKnown RBP7.29□□□□□ -1.24
TPM1-213ENST00000558400 CYSLTR2Q9NS75 346 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 TBC1D23Q9NUY8 699 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 ARMC1Q9NVT9 282 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 CGGBP1Q9UFW8 167 aaPredicted RBP7.29□□□□□ -1.24
TPM1-213ENST00000558400 POLR1DQ9Y2S0 133 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 AP4S1Q9Y587 144 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 COL6A5A8TX70 2615 aa7.29□□□□□ -1.24
TPM1-213ENST00000558400 A0A1W2PPW3 197 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 OR6C6A6NF89 314 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 RIIAD1A6NNX1 92 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 KIAA1324LA8MWY0 1029 aaPredicted RBP7.28□□□□□ -1.24
TPM1-213ENST00000558400 RNF223E7ERA6 249 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 H3BN98 237 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 DCTN6O00399 190 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 SMAD7O15105 426 aaKnown RBP7.28□□□□□ -1.24
TPM1-213ENST00000558400 DOK2O60496 412 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 IGHV3-13P01766 116 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms