RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 PLPPR1Q8TBJ4 325 aa1.03□□□□□ -2.24
CTDSPL2-202ENST00000558373 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.03□□□□□ -2.24
CTDSPL2-202ENST00000558373 ECHDC3Q96DC8 303 aa1.03□□□□□ -2.24
CTDSPL2-202ENST00000558373 CYYR1Q96J86 154 aa1.03□□□□□ -2.24
CTDSPL2-202ENST00000558373 NOL4LQ96MY1 436 aaPredicted RBP1.03□□□□□ -2.24
CTDSPL2-202ENST00000558373 SULT4A1Q9BR01 284 aa1.03□□□□□ -2.24
CTDSPL2-202ENST00000558373 EMC6Q9BV81 110 aa1.03□□□□□ -2.24
CTDSPL2-202ENST00000558373 DEFB129Q9H1M3 183 aa1.03□□□□□ -2.24
CTDSPL2-202ENST00000558373 ZNF702PQ9H963 129 aa1.03□□□□□ -2.24
CTDSPL2-202ENST00000558373 DDX19AQ9NUU7 478 aaKnown RBP1.03□□□□□ -2.24
CTDSPL2-202ENST00000558373 MCUBQ9NWR8 336 aa1.03□□□□□ -2.24
CTDSPL2-202ENST00000558373 KCNIP3Q9Y2W7 256 aa1.03□□□□□ -2.24
CTDSPL2-202ENST00000558373 MEMO1Q9Y316 297 aa1.03□□□□□ -2.24
CTDSPL2-202ENST00000558373 JCADQ9P266 1359 aa1.03□□□□□ -2.24
CTDSPL2-202ENST00000558373 KIAA1549LQ6ZVL6 1849 aa1.03□□□□□ -2.24
CTDSPL2-202ENST00000558373 ABCA8O94911 1581 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 MED14O60244 1454 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 MSH6P52701 1360 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 EPOPA6NHQ4 379 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 PDZK1P1A8MUH7 402 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 SERPINE3A8MV23 424 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 E7ENQ6 273 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 POLR3GO15318 223 aaPredicted RBP1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 SCO1O75880 301 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 CSF3P09919 207 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 ZNF883P0CG24 379 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 CCDC166P0CW27 439 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 ZNF43P17038 809 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 AP1S2P56377 157 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 CLDN6P56747 220 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 NUP107P57740 925 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 RAB11AP62491 216 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 RPL10AP62906 217 aaKnown RBP1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 KIR2DS1Q14954 304 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 RAB11BQ15907 218 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 KCTD19Q17RG1 926 aaPredicted RBP1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 TPTE2P1Q5T6R2 138 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 LEMD1Q68G75 181 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 ZNF329Q86UD4 541 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 LHFPL3Q86UP9 236 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 CBR4Q8N4T8 237 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 TMEM104Q8NE00 496 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 NOXO1Q8NFA2 376 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 OR9G4Q8NGQ1 327 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 ZNF502Q8TBZ5 544 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 IMMP1LQ96LU5 166 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 FOPNLQ96NB1 174 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 PANX2Q96RD6 677 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 C20orf85Q9H1P6 137 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 PIGUQ9H490 435 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 HMG20AQ9NP66 347 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 PXMP2Q9NR77 195 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 TREX1Q9NSU2 369 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 CTSFQ9UBX1 484 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 SLC7A8Q9UHI5 535 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 AP3M1Q9Y2T2 418 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 UGT2A1Q9Y4X1 527 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 SLC25A15Q9Y619 301 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 FOCADQ5VW36 1801 aa1.03□□□□□ -2.25
CTDSPL2-202ENST00000558373 ARAP3Q8WWN8 1544 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 PPIP5K1Q6PFW1 1433 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 WDR19Q8NEZ3 1342 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 SYNMO15061 1565 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 MBD5Q9P267 1494 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 MLH3Q9UHC1 1453 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 NRXN1Q9ULB1 1477 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 KIAA0232Q92628 1395 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 A0A1B0GUA9 196 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 GJE1A6NN92 205 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 CDX4O14627 284 aaPredicted RBP1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 HSD17B6O14756 317 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 ICOSLGO75144 302 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 CTAG2O75638 210 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 IGHV3-48P01763 117 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 GKN3PP0CG01 181 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 ETS2P15036 469 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 LOXP28300 417 aaPredicted RBP1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 HTR1FP30939 366 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 ARL2P36404 184 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 MDH2P40926 338 aaKnown RBP1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 KCNJ3P48549 501 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 DNASE1L1P49184 302 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 TMED10P49755 219 aaKnown RBP1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 DIO3P55073 304 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 CACNG7P62955 275 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 ST3GAL3Q11203 375 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 NAB1Q13506 487 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 STK11Q15831 433 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 CARD16Q5EG05 197 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 IDNKQ5T6J7 187 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 AADACL4Q5VUY2 407 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 FRMPD2BQ6IN97 320 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 REEP3Q6NUK4 255 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 ZNF343Q6P1L6 599 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 NPSR1Q6W5P4 371 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 GPRIN3Q6ZVF9 776 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 SLC26A11Q86WA9 606 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 DRAXINQ8NBI3 349 aaPredicted RBP1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 OR2T33Q8NG76 320 aa1.02□□□□□ -2.25
CTDSPL2-202ENST00000558373 OR5L2Q8NGL0 311 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms