RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 KMOO15229 486 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 GMDSO60547 372 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 ENTPD5O75356 428 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 OR2J3O76001 311 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 INSP01308 110 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 IGHV4-34P06331 123 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 RPS17P08708 135 aaKnown RBP2.09□□□□□ -2.07
SPG11-206ENST00000558093 UBCP0CG48 685 aaKnown RBP2.09□□□□□ -2.07
SPG11-206ENST00000558093 PPIAL4FP0DN26 164 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 ATP1B2P14415 290 aaPredicted RBP2.09□□□□□ -2.07
SPG11-206ENST00000558093 XRCC1P18887 633 aaPredicted RBP2.09□□□□□ -2.07
SPG11-206ENST00000558093 EIF2S2P20042 333 aaKnown RBP2.09□□□□□ -2.07
SPG11-206ENST00000558093 MMP11P24347 488 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 STOMP27105 288 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 CRABP2P29373 138 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 AQP1P29972 269 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 OR1E1P30953 314 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 CYLC1P35663 651 aaPredicted RBP2.09□□□□□ -2.07
SPG11-206ENST00000558093 CD79BP40259 229 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 AQP2P41181 271 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 SERPINB8P50452 374 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 HSPA2P54652 639 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 APOC4P55056 127 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 ATP6V0D1P61421 351 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 LCN2P80188 198 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 PITPNAQ00169 270 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 MGAT3Q09327 533 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 BST2Q10589 180 aaKnown RBP2.09□□□□□ -2.07
SPG11-206ENST00000558093 GK3PQ14409 553 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 PTPN20Q4JDL3 420 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 ZCWPW2Q504Y3 356 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 YIF1BQ5BJH7 314 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 FAM120AOSQ5T036 256 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 TIGD3Q6B0B8 471 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 OR4F3Q6IEY1 312 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 SLC8B1Q6J4K2 584 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 RNF165Q6ZSG1 346 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 CYS1Q717R9 158 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 CENPUQ71F23 418 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 DPY19L4Q7Z388 723 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 FAM220AQ7Z4H9 259 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 C17orf82Q86X59 251 aaPredicted RBP2.09□□□□□ -2.07
SPG11-206ENST00000558093 TGIF2LXQ8IUE1 241 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 ZFP82Q8N141 532 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.09□□□□□ -2.07
SPG11-206ENST00000558093 Q8N9W7 124 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 LRRC75AQ8NAA5 344 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 SUMF2Q8NBJ7 301 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 CCDC112Q8NEF3 446 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 STXBP6Q8NFX7 210 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 OR51G2Q8NGK0 314 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 OR52I1Q8NGK6 324 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 OR1L6Q8NGR2 347 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 NEIL3Q8TAT5 605 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 CNIH3Q8TBE1 160 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 ACTL9Q8TC94 416 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 BLOC1S5Q8TDH9 187 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 CA5BP1Q8WTZ4 195 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 PIH1D2Q8WWB5 315 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 DNAJB3Q8WWF6 145 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 MYDGFQ969H8 173 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 C10orf35Q96D05 121 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 SH3YL1Q96HL8 342 aaPredicted RBP2.09□□□□□ -2.07
SPG11-206ENST00000558093 CEP170P1Q96L14 293 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 C12orf42Q96LP6 360 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 VSTM2LQ96N03 204 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 OPALINQ96PE5 141 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 TGM7Q96PF1 710 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 OR5B2Q96R09 309 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 CALN1Q9BXU9 219 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 BEX2Q9BXY8 128 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 DUSP16Q9BY84 665 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 POLR2J2Q9GZM3 115 aaKnown RBP2.09□□□□□ -2.07
SPG11-206ENST00000558093 POLR2J3Q9H1A7 115 aaKnown RBP2.09□□□□□ -2.07
SPG11-206ENST00000558093 LHX5Q9H2C1 402 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 C1orf198Q9H425 327 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 UGT1A10Q9HAW8 530 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 ZDHHC4Q9NPG8 344 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 DIABLOQ9NR28 239 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 SIRT7Q9NRC8 400 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 C19orf12Q9NSK7 152 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 UVRAGQ9P2Y5 699 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 ZNF225Q9UK10 706 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 RAB23Q9ULC3 237 aa2.09□□□□□ -2.07
SPG11-206ENST00000558093 TSSC4Q9Y5U2 329 aaPredicted RBP2.09□□□□□ -2.07
SPG11-206ENST00000558093 ELP1O95163 1332 aa2.09□□□□□ -2.08
SPG11-206ENST00000558093 CCDC7Q96M83 1385 aa2.09□□□□□ -2.08
SPG11-206ENST00000558093 IGKV2D-24A0A075B6R9 120 aa2.08□□□□□ -2.08
SPG11-206ENST00000558093 TMEM238C9JI98 176 aa2.08□□□□□ -2.08
SPG11-206ENST00000558093 RNASEK-C17orf49H0YIS7 233 aa2.08□□□□□ -2.08
SPG11-206ENST00000558093 M0QXV9 152 aa2.08□□□□□ -2.08
SPG11-206ENST00000558093 FCN1O00602 326 aa2.08□□□□□ -2.08
SPG11-206ENST00000558093 STX7O15400 261 aaKnown RBP2.08□□□□□ -2.08
SPG11-206ENST00000558093 AQP9O43315 295 aa2.08□□□□□ -2.08
SPG11-206ENST00000558093 XRCC2O43543 280 aa2.08□□□□□ -2.08
SPG11-206ENST00000558093 AIREO43918 545 aa2.08□□□□□ -2.08
SPG11-206ENST00000558093 EFNA2O43921 213 aa2.08□□□□□ -2.08
SPG11-206ENST00000558093 STX10O60499 249 aa2.08□□□□□ -2.08
SPG11-206ENST00000558093 HUS1O60921 280 aa2.08□□□□□ -2.08
SPG11-206ENST00000558093 NPIPB7O75200 414 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms