RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 SGCEO43556 437 aa22.11■■□□□ 1.13
SMAD6-202ENST00000557916 TLX2O43763 284 aaPredicted RBP22.11■■□□□ 1.13
SMAD6-202ENST00000557916 GGT2P36268 569 aa22.11■■□□□ 1.13
SMAD6-202ENST00000557916 CORO6Q6QEF8 472 aa22.11■■□□□ 1.13
SMAD6-202ENST00000557916 LINC00346Q8IVM7 164 aa22.11■■□□□ 1.13
SMAD6-202ENST00000557916 TCEANCQ8N8B7 351 aa22.11■■□□□ 1.13
SMAD6-202ENST00000557916 BBS1Q8NFJ9 593 aa22.11■■□□□ 1.13
SMAD6-202ENST00000557916 OR2AJ1Q8NGZ0 328 aa22.11■■□□□ 1.13
SMAD6-202ENST00000557916 DHRS9Q9BPW9 319 aa22.11■■□□□ 1.13
SMAD6-202ENST00000557916 WDR76Q9H967 626 aa22.11■■□□□ 1.13
SMAD6-202ENST00000557916 PLEK2Q9NYT0 353 aa22.11■■□□□ 1.13
SMAD6-202ENST00000557916 CYB5R1Q9UHQ9 305 aa22.11■■□□□ 1.13
SMAD6-202ENST00000557916 ST6GALNAC2Q9UJ37 374 aa22.11■■□□□ 1.13
SMAD6-202ENST00000557916 COMMD3-BMI1R4GMX3 469 aa22.11■■□□□ 1.13
SMAD6-202ENST00000557916 RER1O15258 196 aa22.1■■□□□ 1.13
SMAD6-202ENST00000557916 DOK2O60496 412 aa22.1■■□□□ 1.13
SMAD6-202ENST00000557916 SNAP29O95721 258 aa22.1■■□□□ 1.13
SMAD6-202ENST00000557916 GDI2P50395 445 aaKnown RBP22.1■■□□□ 1.13
SMAD6-202ENST00000557916 HIST1H3AP68431 136 aa22.1■■□□□ 1.13
SMAD6-202ENST00000557916 EFNB1P98172 346 aa22.1■■□□□ 1.13
SMAD6-202ENST00000557916 GALK2Q01415 458 aa22.1■■□□□ 1.13
SMAD6-202ENST00000557916 HIST2H3PS2Q5TEC6 136 aa22.1■■□□□ 1.13
SMAD6-202ENST00000557916 SLC18B1Q6NT16 456 aa22.1■■□□□ 1.13
SMAD6-202ENST00000557916 HIST2H3AQ71DI3 136 aa22.1■■□□□ 1.13
SMAD6-202ENST00000557916 CDH24Q86UP0 819 aa22.1■■□□□ 1.13
SMAD6-202ENST00000557916 PAQR4Q8N4S7 273 aaPredicted RBP22.1■■□□□ 1.13
SMAD6-202ENST00000557916 TMEM163Q8TC26 289 aa22.1■■□□□ 1.13
SMAD6-202ENST00000557916 SMAP2Q8WU79 429 aaPredicted RBP22.1■■□□□ 1.13
SMAD6-202ENST00000557916 POM121L2Q96KW2 1035 aa22.1■■□□□ 1.13
SMAD6-202ENST00000557916 IL4I1Q96RQ9 567 aa22.1■■□□□ 1.13
SMAD6-202ENST00000557916 PLEKHA6Q9Y2H5 1048 aa22.1■■□□□ 1.13
SMAD6-202ENST00000557916 SPEF1Q9Y4P9 236 aa22.1■■□□□ 1.13
SMAD6-202ENST00000557916 LOC100509620A0A075B734 347 aa22.09■■□□□ 1.13
SMAD6-202ENST00000557916 CCNOP22674 350 aa22.09■■□□□ 1.13
SMAD6-202ENST00000557916 NR4A1P22736 598 aa22.09■■□□□ 1.13
SMAD6-202ENST00000557916 PEX2P28328 305 aa22.09■■□□□ 1.13
SMAD6-202ENST00000557916 GSTT1P30711 240 aa22.09■■□□□ 1.13
SMAD6-202ENST00000557916 RPS7P62081 194 aaKnown RBP22.09■■□□□ 1.13
SMAD6-202ENST00000557916 KEAP1Q14145 624 aa22.09■■□□□ 1.13
SMAD6-202ENST00000557916 CCDC92Q53HC0 331 aaPredicted RBP22.09■■□□□ 1.13
SMAD6-202ENST00000557916 KRT80Q6KB66 452 aa22.09■■□□□ 1.13
SMAD6-202ENST00000557916 VASH1Q7L8A9 365 aaPredicted RBP22.09■■□□□ 1.13
SMAD6-202ENST00000557916 GALNT4Q8N4A0 578 aa22.09■■□□□ 1.13
SMAD6-202ENST00000557916 NUP37Q8NFH4 326 aa22.09■■□□□ 1.13
SMAD6-202ENST00000557916 ZMYND19Q96E35 227 aaPredicted RBP22.09■■□□□ 1.13
SMAD6-202ENST00000557916 MBOAT4Q96T53 435 aa22.09■■□□□ 1.13
SMAD6-202ENST00000557916 NDRG4Q9ULP0 352 aaKnown RBP22.09■■□□□ 1.13
SMAD6-202ENST00000557916 C5orf49A4QMS7 147 aa22.08■■□□□ 1.13
SMAD6-202ENST00000557916 TMCC2O75069 709 aa22.08■■□□□ 1.13
SMAD6-202ENST00000557916 RAF1P04049 648 aa22.08■■□□□ 1.13
SMAD6-202ENST00000557916 COX5BP10606 129 aa22.08■■□□□ 1.13
SMAD6-202ENST00000557916 SLC2A5P22732 501 aa22.08■■□□□ 1.13
SMAD6-202ENST00000557916 RPS27P42677 84 aaKnown RBP22.08■■□□□ 1.13
SMAD6-202ENST00000557916 ENTPD1P49961 510 aa22.08■■□□□ 1.13
SMAD6-202ENST00000557916 FABP6P51161 128 aa22.08■■□□□ 1.13
SMAD6-202ENST00000557916 CDC42P60953 191 aa22.08■■□□□ 1.13
SMAD6-202ENST00000557916 APOFQ13790 326 aa22.08■■□□□ 1.13
SMAD6-202ENST00000557916 SLC35D3Q5M8T2 416 aa22.08■■□□□ 1.13
SMAD6-202ENST00000557916 VHLLQ6RSH7 139 aa22.08■■□□□ 1.13
SMAD6-202ENST00000557916 HRASLS5Q96KN8 279 aa22.08■■□□□ 1.13
SMAD6-202ENST00000557916 C8orf4Q9NR00 106 aa22.08■■□□□ 1.13
SMAD6-202ENST00000557916 CA10Q9NS85 328 aa22.08■■□□□ 1.13
SMAD6-202ENST00000557916 FAIMQ9NVQ4 179 aa22.08■■□□□ 1.13
SMAD6-202ENST00000557916 NKX1-2Q9UD57 310 aaPredicted RBP22.08■■□□□ 1.13
SMAD6-202ENST00000557916 GDF2Q9UK05 429 aaPredicted RBP22.08■■□□□ 1.13
SMAD6-202ENST00000557916 PDZD2O15018 2839 aa22.08■■□□□ 1.13
SMAD6-202ENST00000557916 RAI1Q7Z5J4 1906 aaPredicted RBP22.08■■□□□ 1.12
SMAD6-202ENST00000557916 ZNF593O00488 134 aaPredicted RBP22.07■■□□□ 1.12
SMAD6-202ENST00000557916 CASQ2O14958 399 aaPredicted RBP22.07■■□□□ 1.12
SMAD6-202ENST00000557916 SYNGR3O43761 229 aa22.07■■□□□ 1.12
SMAD6-202ENST00000557916 ATE1O95260 518 aa22.07■■□□□ 1.12
SMAD6-202ENST00000557916 DANCRP0C864 163 aa22.07■■□□□ 1.12
SMAD6-202ENST00000557916 DNASE1P24855 282 aa22.07■■□□□ 1.12
SMAD6-202ENST00000557916 HTR5AP47898 357 aa22.07■■□□□ 1.12
SMAD6-202ENST00000557916 NKX6-1P78426 367 aaPredicted RBP22.07■■□□□ 1.12
SMAD6-202ENST00000557916 SNTB2Q13425 540 aaKnown RBP22.07■■□□□ 1.12
SMAD6-202ENST00000557916 RAB35Q15286 201 aa22.07■■□□□ 1.12
SMAD6-202ENST00000557916 ZNF544Q6NX49 715 aa22.07■■□□□ 1.12
SMAD6-202ENST00000557916 BCDIN3DQ7Z5W3 292 aaKnown RBP22.07■■□□□ 1.12
SMAD6-202ENST00000557916 PACRGLQ8N7B6 248 aa22.07■■□□□ 1.12
SMAD6-202ENST00000557916 OR1F12Q8NHA8 337 aa22.07■■□□□ 1.12
SMAD6-202ENST00000557916 INTS14Q96SY0 518 aa22.07■■□□□ 1.12
SMAD6-202ENST00000557916 MARCH7Q9H992 704 aa22.07■■□□□ 1.12
SMAD6-202ENST00000557916 H2AFY2Q9P0M6 372 aaPredicted RBP22.07■■□□□ 1.12
SMAD6-202ENST00000557916 PLCE1Q9P212 2302 aa22.07■■□□□ 1.12
SMAD6-202ENST00000557916 ANKRD17O75179 2603 aaKnown RBP22.07■■□□□ 1.12
SMAD6-202ENST00000557916 E9PQ18 207 aa22.06■■□□□ 1.12
SMAD6-202ENST00000557916 SPARCP09486 303 aa22.06■■□□□ 1.12
SMAD6-202ENST00000557916 APOBEC3AP31941 199 aaPredicted RBP22.06■■□□□ 1.12
SMAD6-202ENST00000557916 TTKP33981 857 aa22.06■■□□□ 1.12
SMAD6-202ENST00000557916 SLC34A1Q06495 639 aa22.06■■□□□ 1.12
SMAD6-202ENST00000557916 TEX30Q5JUR7 227 aa22.06■■□□□ 1.12
SMAD6-202ENST00000557916 ELFN2Q5R3F8 820 aa22.06■■□□□ 1.12
SMAD6-202ENST00000557916 TMEM154Q6P9G4 183 aa22.06■■□□□ 1.12
SMAD6-202ENST00000557916 CFAP77Q6ZQR2 320 aa22.06■■□□□ 1.12
SMAD6-202ENST00000557916 ERI1Q8IV48 349 aaKnown RBP22.06■■□□□ 1.12
SMAD6-202ENST00000557916 OR8J1Q8NGP2 316 aa22.06■■□□□ 1.12
SMAD6-202ENST00000557916 FAM81AQ8TBF8 368 aa22.06■■□□□ 1.12
SMAD6-202ENST00000557916 CCL19Q99731 98 aa22.06■■□□□ 1.12
SMAD6-202ENST00000557916 HDHD2Q9H0R4 259 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms