RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 PHF19Q5T6S3 580 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 RAB12Q6IQ22 244 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 ZDHHC22Q8N966 263 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 MITD1Q8WV92 249 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 PTX4Q96A99 478 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 GABRG3Q99928 467 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 S1PR5Q9H228 398 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 CLDN16Q9Y5I7 305 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 PRSS37A4D1T9 235 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 IL33O95760 270 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 IL2RAP01589 272 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 BGLAPP02818 100 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 HOXB2P14652 356 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 COL9A1P20849 921 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 CXCR1P25024 350 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 HOXA1P49639 335 aaPredicted RBP10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 IL13RA1P78552 427 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 PPP1R1AQ13522 171 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 PRTGQ2VWP7 1150 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 MOGAT2Q3SYC2 334 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 CDNFQ49AH0 187 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 CD163Q86VB7 1156 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 ZNF761Q86XN6 746 aaPredicted RBP10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 PUSL1Q8N0Z8 303 aaKnown RBP10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 OR4S1Q8NGB4 309 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 FAM174AQ8TBP5 190 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 C8orf44Q96CB5 159 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 NUDT9Q9BW91 350 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 ADAM19Q9H013 955 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 CST11Q9H112 138 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 MBD2Q9UBB5 411 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 HHLA2Q9UM44 414 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 CHD7Q9P2D1 2997 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 TRAV36DV7A0A075B6V5 113 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 C9orf170A2RU37 121 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 FITM1A5D6W6 292 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 METTL21EPA6NDL7 271 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 ZNF98A6NK75 572 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 SLC16A7O60669 478 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 CLPSP04118 112 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 MPZP25189 248 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 SLC6A8P48029 635 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 SPOCK1Q08629 439 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 SCRN3Q0VDG4 424 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 EIF2B1Q14232 305 aaKnown RBP10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 HFEQ30201 348 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 OR10K2Q6IF99 312 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 RAB11FIP2Q7L804 512 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 MAMDC2Q7Z304 686 aaPredicted RBP10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 SFTPA2Q8IWL1 248 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 GTPBP8Q8N3Z3 284 aaPredicted RBP10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 C19orf47Q8N9M1 422 aaKnown RBP10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 ZSCAN1Q8NBB4 408 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 OR13C3Q8NGS6 347 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 SLC37A2Q8TED4 501 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 ZNF524Q96C55 264 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 LAT2Q9GZY6 243 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 MRPL22Q9NWU5 206 aaKnown RBP10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 MYEF2Q9P2K5 600 aaKnown RBP10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 GMEB2Q9UKD1 530 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 MKI67P46013 3256 aaKnown RBP10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 KIR2DS5A0A0G2JLQ3 304 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 A0A0G2JNG1 304 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 A0A1W2PQF6 199 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 KIR2DS3K7RE56 304 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 FGF16O43320 207 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 PLGP00747 810 aaPredicted RBP10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 RAB6AP20340 208 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 AKR1D1P51857 326 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 RPL27P61353 136 aaKnown RBP10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 YPEL5P62699 121 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 KIR2DS5Q14953 304 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 ACKR1Q16570 336 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 FAHD2BQ6P2I3 314 aaPredicted RBP10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 POMZP3Q6PJE2 187 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 CORO6Q6QEF8 472 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 UNQ6126/PRO20091Q6UXV3 157 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 ZNF813Q6ZN06 617 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 FJX1Q86VR8 437 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 LDLRAD3Q86YD5 345 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 SPAG16Q8N0X2 631 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 AVL9Q8NBF6 648 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 ACBD4Q8NC06 268 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 OR51A2Q8NGJ7 313 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 AQP3Q92482 292 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 FOXRED1Q96CU9 486 aaPredicted RBP10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 FAHD2AQ96GK7 314 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 ABHD6Q9BV23 337 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 LRP12Q9Y561 859 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 DOCK8Q8NF50 2099 aa10.62□□□□□ -0.71
VIPAS39-211ENST00000557658 LRP4O75096 1905 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 LOC100509620A0A075B734 347 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 IGLV1-36A0A0B4J1U3 117 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 OR5K4A6NMS3 321 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 NUDT19A8MXV4 375 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 ZNF208O43345 1280 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 FADS1O60427 444 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 TNFP01375 233 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 TPT1P13693 172 aaKnown RBP10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 PVALBP20472 110 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms