RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 GFYI3L273 518 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 SOCS3O14543 225 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 PIN1P1O15428 100 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 ANXA5P08758 320 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 UBTFL1P0CB47 393 aaPredicted RBP3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 CCNB1P14635 433 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 ABOP16442 354 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 ZNF43P17038 809 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 TCN2P20062 427 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 BCAP31P51572 246 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 EFNA3P52797 238 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 ERVK11-1P61568 191 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 TWF1Q12792 350 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 TMEM30BQ3MIR4 351 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 LEMD1Q68G75 181 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 OR52E8Q6IFG1 317 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 TMUB2Q71RG4 321 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 OR13F1Q8NGS4 319 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 OR56B4Q8NH76 319 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 PLPPR1Q8TBJ4 325 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 GLYATL2Q8WU03 294 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 TFB1MQ8WVM0 346 aaKnown RBP3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 ZBED6CLQ96FA7 236 aaPredicted RBP3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 MCHR1Q99705 422 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 FGFBP2Q9BYJ0 223 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 ANKRD60Q9BZ19 345 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 CHIAQ9BZP6 476 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 RGCCQ9H4X1 137 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 SYNDIG1Q9H7V2 258 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 CCNB1IP1Q9NPC3 277 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 PXMP2Q9NR77 195 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 IMPAD1Q9NX62 359 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 B3GNT2Q9NY97 397 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 CTSZQ9UBR2 303 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 CFAP45Q9UL16 551 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 CCL26Q9Y258 94 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 INTS1Q8N201 2190 aaKnown RBP3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 CACNA1CQ13936 2221 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 USF3Q68DE3 2245 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 LINC00854A0A1B0GVQ3 168 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 TUBAL3A6NHL2 446 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 OR5B21A6NL26 309 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 IFITM10A6NMD0 228 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 ZNF705EA8MWA4 302 aaPredicted RBP3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 SAP18O00422 153 aaKnown RBP3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 SLC17A2O00624 439 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 DPM1O60762 260 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 OR7A10O76100 309 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 APODP05090 189 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 TRIM49P0CI25 452 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 TRIM49CP0CI26 452 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 LAMP1P11279 417 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 CPN2P22792 545 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 ADORA2BP29275 332 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 HTR1FP30939 366 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 RRM2P31350 389 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 BMI1P35226 326 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 RPL29P47914 159 aaKnown RBP3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 RFX3P48380 749 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 IRF8Q02556 426 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 LIPEQ05469 1076 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 OR5I1Q13606 314 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 LTB4RQ15722 352 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 NHLRC3Q5JS37 347 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 UFSP1Q6NVU6 142 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 C9orf40Q8IXQ3 194 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 ACBD4Q8NC06 268 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 BBS1Q8NFJ9 593 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 OR4K14Q8NGD5 310 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 OR52I1Q8NGK6 324 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 OR6T1Q8NGN1 323 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 OR4C6Q8NH72 309 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 ZNF461Q8TAF7 563 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 ZPLD1Q8TCW7 415 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 GPX8Q8TED1 209 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 OXGR1Q96P68 337 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 ELOVL4Q9GZR5 314 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 STMN4Q9H169 189 aaPredicted RBP3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 ELOVL6Q9H5J4 265 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 XKR8Q9H6D3 395 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 MRPL40Q9NQ50 206 aaKnown RBP3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 AGPAT4Q9NRZ5 378 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 LYARQ9NX58 379 aaKnown RBP3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 SPRR3Q9UBC9 169 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 ASIC3Q9UHC3 531 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 RPL36Q9Y3U8 105 aaKnown RBP3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 COMMD3-BMI1R4GMX3 469 aa3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 COL27A1Q8IZC6 1860 aaPredicted RBP3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 HRNRQ86YZ3 2850 aaPredicted RBP3.83□□□□□ -1.8
MTHFD1-216ENST00000557539 ABCA1O95477 2261 aa3.82□□□□□ -1.8
MTHFD1-216ENST00000557539 A0A1B0GWB2 263 aa3.82□□□□□ -1.8
MTHFD1-216ENST00000557539 CCL21O00585 134 aa3.82□□□□□ -1.8
MTHFD1-216ENST00000557539 UGT1A9O60656 530 aa3.82□□□□□ -1.8
MTHFD1-216ENST00000557539 C1orf105O95561 183 aa3.82□□□□□ -1.8
MTHFD1-216ENST00000557539 CSTAP01040 98 aa3.82□□□□□ -1.8
MTHFD1-216ENST00000557539 MELTFP08582 738 aa3.82□□□□□ -1.8
MTHFD1-216ENST00000557539 HOXD4P09016 255 aaPredicted RBP3.82□□□□□ -1.8
MTHFD1-216ENST00000557539 CFC1BP0CG36 223 aa3.82□□□□□ -1.8
MTHFD1-216ENST00000557539 CFC1P0CG37 223 aa3.82□□□□□ -1.8
MTHFD1-216ENST00000557539 PRKACAP17612 351 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms