RNA–Protein interactions for RNA: ENST00000557320.5

PAPOLA-223, Transcript of poly(A) polymerase alpha, humanhuman

TSL 1 (best) BASIC

Gene PAPOLA, Length 3,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-223ENST00000557320 IL36AQ9UHA7 158 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 SLCO1B1Q9Y6L6 691 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 MYO16Q9Y6X6 1858 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 TBC1D3DA0A087WVF3 549 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 TBC1D3IA0A087WXS9 549 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 TBC1D3EA0A087X179 549 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 TBC1D3KA0A087X1G2 549 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 A0A1B0GTI1 187 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 TBC1D3FA6NER0 549 aaPredicted RBP13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 PRSS47A8MTI9 375 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 TBC1D3LB9A6J9 549 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 CCL16O15467 120 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 GLCEO94923 617 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 SLC16A8O95907 504 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 SFTPBP07988 381 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 HMGA1P17096 107 aaKnown RBP13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 CCSMST1Q4G0I0 132 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 MIDNQ504T8 468 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 RNF219Q5W0B1 726 aaPredicted RBP13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 TBC1D3CQ6IPX1 549 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 VRK2Q86Y07 508 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 DND1Q8IYX4 353 aaKnown RBP13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 TBC1D3Q8IZP1 549 aaPredicted RBP13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 OR13C9Q8NGT0 318 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 RRNAD1Q96FB5 475 aaKnown RBP13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 C1QTNF2Q9BXJ5 285 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 WDR45Q9Y484 360 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 HELZP42694 1942 aaKnown RBP13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 SERTM1A2A2V5 107 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 MSGN1A6NI15 193 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 C19orf67A6NJJ6 358 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 ZNF736B4DX44 427 aaPredicted RBP13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 F8VVB4 439 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 F8VWA3 439 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 EIF1AYO14602 144 aaKnown RBP13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 ITGB2P05107 769 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 CRHP06850 196 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 CALCBP10092 127 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 F3P13726 295 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 TAGLN2P37802 199 aaKnown RBP13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 EIF1AXP47813 144 aaKnown RBP13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 FXYD6P3P58550 94 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 NR0B2Q15466 257 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 RPL22L1Q6P5R6 122 aaKnown RBP13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 FAM129CQ86XR2 697 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 SMIM8Q96KF7 97 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 SNX22Q96L94 193 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 SEPT5Q99719 369 aaPredicted RBP13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 LMAN1LQ9HAT1 526 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 NEUROD4Q9HD90 331 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 CD84Q9UIB8 345 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 DYRK1BQ9Y463 629 aa13.54□□□□□ -0.24
PAPOLA-223ENST00000557320 SLC5A10A0PJK1 596 aa13.53□□□□□ -0.24
PAPOLA-223ENST00000557320 UNC119BA6NIH7 251 aa13.53□□□□□ -0.24
PAPOLA-223ENST00000557320 OR2AG2A6NM03 316 aa13.53□□□□□ -0.24
PAPOLA-223ENST00000557320 GJD3Q8N144 294 aa13.53□□□□□ -0.24
PAPOLA-223ENST00000557320 ZSCAN4Q8NAM6 433 aaPredicted RBP13.53□□□□□ -0.24
PAPOLA-223ENST00000557320 ADAMTS17Q8TE56 1095 aa13.53□□□□□ -0.24
PAPOLA-223ENST00000557320 NTNG2Q96CW9 530 aa13.53□□□□□ -0.24
PAPOLA-223ENST00000557320 PHF7Q9BWX1 381 aaPredicted RBP13.53□□□□□ -0.24
PAPOLA-223ENST00000557320 PRODH2Q9UF12 536 aa13.53□□□□□ -0.24
PAPOLA-223ENST00000557320 ANAPC1Q9H1A4 1944 aa13.53□□□□□ -0.24
PAPOLA-223ENST00000557320 ALPK2Q86TB3 2170 aa13.53□□□□□ -0.24
PAPOLA-223ENST00000557320 ARSJQ5FYB0 599 aaPredicted RBP13.53□□□□□ -0.24
PAPOLA-223ENST00000557320 M1APQ8TC57 530 aa13.53□□□□□ -0.24
PAPOLA-223ENST00000557320 GALNT14Q96FL9 552 aa13.53□□□□□ -0.24
PAPOLA-223ENST00000557320 LMF1Q96S06 567 aa13.53□□□□□ -0.24
PAPOLA-223ENST00000557320 GFI1Q99684 422 aa13.53□□□□□ -0.24
PAPOLA-223ENST00000557320 NKX3-1Q99801 234 aaPredicted RBP13.53□□□□□ -0.24
PAPOLA-223ENST00000557320 SLC6A7Q99884 636 aa13.53□□□□□ -0.24
PAPOLA-223ENST00000557320 CNTNAP3Q9BZ76 1288 aa13.53□□□□□ -0.24
PAPOLA-223ENST00000557320 IL21Q9HBE4 155 aa13.53□□□□□ -0.24
PAPOLA-223ENST00000557320 ADGRL4Q9HBW9 690 aa13.53□□□□□ -0.24
PAPOLA-223ENST00000557320 ZDHHC3Q9NYG2 299 aa13.53□□□□□ -0.24
PAPOLA-223ENST00000557320 ALOX12BO75342 701 aa13.52□□□□□ -0.24
PAPOLA-223ENST00000557320 CATP04040 527 aaKnown RBP13.52□□□□□ -0.24
PAPOLA-223ENST00000557320 IL9P15248 144 aa13.52□□□□□ -0.24
PAPOLA-223ENST00000557320 MSX1P28360 303 aa13.52□□□□□ -0.24
PAPOLA-223ENST00000557320 NCR3LG1Q68D85 454 aa13.52□□□□□ -0.24
PAPOLA-223ENST00000557320 TMPPEQ6ZT21 453 aa13.52□□□□□ -0.24
PAPOLA-223ENST00000557320 ZNF283Q8N7M2 679 aa13.52□□□□□ -0.24
PAPOLA-223ENST00000557320 TMEM104Q8NE00 496 aa13.52□□□□□ -0.24
PAPOLA-223ENST00000557320 CST11Q9H112 138 aa13.52□□□□□ -0.24
PAPOLA-223ENST00000557320 PRDM7Q9NQW5 492 aa13.52□□□□□ -0.24
PAPOLA-223ENST00000557320 CYTL1Q9NRR1 136 aa13.52□□□□□ -0.24
PAPOLA-223ENST00000557320 GPR55Q9Y2T6 319 aaPredicted RBP13.52□□□□□ -0.24
PAPOLA-223ENST00000557320 PRAMEF27A3QJZ7 478 aa13.52□□□□□ -0.24
PAPOLA-223ENST00000557320 SLC38A8A6NNN8 435 aa13.52□□□□□ -0.24
PAPOLA-223ENST00000557320 KDELR3O43731 214 aa13.52□□□□□ -0.24
PAPOLA-223ENST00000557320 ERAL1O75616 437 aaKnown RBP13.52□□□□□ -0.24
PAPOLA-223ENST00000557320 GPANK1O95872 356 aa13.52□□□□□ -0.24
PAPOLA-223ENST00000557320 RPLP1P05386 114 aaKnown RBP13.52□□□□□ -0.24
PAPOLA-223ENST00000557320 ELFN1P0C7U0 828 aa13.52□□□□□ -0.24
PAPOLA-223ENST00000557320 PDE7AQ13946 482 aa13.52□□□□□ -0.24
PAPOLA-223ENST00000557320 STAC2Q6ZMT1 411 aa13.52□□□□□ -0.24
PAPOLA-223ENST00000557320 OR6K6Q8NGW6 343 aa13.52□□□□□ -0.24
PAPOLA-223ENST00000557320 SLC25A43Q8WUT9 341 aaPredicted RBP13.52□□□□□ -0.24
PAPOLA-223ENST00000557320 OVCA2Q8WZ82 227 aa13.52□□□□□ -0.24
PAPOLA-223ENST00000557320 SLC41A3Q96GZ6 507 aa13.52□□□□□ -0.24
PAPOLA-223ENST00000557320 LGR4Q9BXB1 951 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms